BLASTX nr result

ID: Glycyrrhiza24_contig00005366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005366
         (1925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778...   223   2e-55
ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804...   223   2e-55
gb|ACU21281.1| unknown [Glycine max]                                  223   2e-55
gb|ACJ85259.1| unknown [Medicago truncatula]                          216   1e-53
emb|CAA76346.1| putative arginine/serine-rich splicing factor [M...   216   1e-53

>ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
          Length = 267

 Score =  223 bits (567), Expect = 2e-55
 Identities = 109/109 (100%), Positives = 109/109 (100%)
 Frame = -3

Query: 1803 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 1624
            MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA
Sbjct: 1    MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 1623 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET 1477
            FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET
Sbjct: 61   FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET 109



 Score =  105 bits (263), Expect = 3e-20
 Identities = 58/101 (57%), Positives = 59/101 (58%)
 Frame = -3

Query: 1296 ASPDYKGRGRGRYDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSP 1117
            AS DYKGRGRGRYDDE                                        RKSP
Sbjct: 167  ASLDYKGRGRGRYDDERNSRSRSRSVDSGSPARRSPSPRRSPSPQRSTSPQRSPSPRKSP 226

Query: 1116 RGESPDNRSRDGKSPTPRSVSPRGRPDASRSPSPRNSNGDE 994
            RGESP NRSRDG+SPTPRSVSPRGRPDASRSPSPRNSNGDE
Sbjct: 227  RGESPANRSRDGRSPTPRSVSPRGRPDASRSPSPRNSNGDE 267


>ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
          Length = 267

 Score =  223 bits (567), Expect = 2e-55
 Identities = 109/109 (100%), Positives = 109/109 (100%)
 Frame = -3

Query: 1803 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 1624
            MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA
Sbjct: 1    MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 1623 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET 1477
            FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET
Sbjct: 61   FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET 109



 Score =  101 bits (251), Expect = 8e-19
 Identities = 56/101 (55%), Positives = 58/101 (57%)
 Frame = -3

Query: 1296 ASPDYKGRGRGRYDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSP 1117
            AS DYKGRGRGRYDDE                                        RKSP
Sbjct: 167  ASLDYKGRGRGRYDDERNSRSRSRSVDSRSPARRSPSPRRSPSPQRSTSPQRSTSPRKSP 226

Query: 1116 RGESPDNRSRDGKSPTPRSVSPRGRPDASRSPSPRNSNGDE 994
            RGESP NRSR+ +SPTPRSVSPRGRPDASRSPSPRNSNGDE
Sbjct: 227  RGESPANRSREERSPTPRSVSPRGRPDASRSPSPRNSNGDE 267


>gb|ACU21281.1| unknown [Glycine max]
          Length = 254

 Score =  223 bits (567), Expect = 2e-55
 Identities = 109/109 (100%), Positives = 109/109 (100%)
 Frame = -3

Query: 1803 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 1624
            MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA
Sbjct: 1    MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 1623 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET 1477
            FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET
Sbjct: 61   FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET 109


>gb|ACJ85259.1| unknown [Medicago truncatula]
          Length = 280

 Score =  216 bits (551), Expect = 1e-53
 Identities = 106/109 (97%), Positives = 107/109 (98%)
 Frame = -3

Query: 1803 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 1624
            MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA
Sbjct: 1    MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 1623 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET 1477
            FVRYKYADEA KAV+RLDGRMVDGREITVQFAKYGPNAERI KGRIIET
Sbjct: 61   FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRIIET 109



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 52/113 (46%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
 Frame = -3

Query: 1296 ASPDYKGRGRGRYDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--- 1126
            ASP YKGRGRGR+DDE                                        +   
Sbjct: 168  ASPGYKGRGRGRHDDERRSRSPSRSVDSRSPVRRSSIPKRSPSPKRSPSPKRSPSLKRSI 227

Query: 1125 ---------KSPRGESPDNRSRDGKSPTPRSVSPRGRPDASRSPSPRNSNGDE 994
                     KSP  ESPDNRSR G+S TPRSVSPRGRP ASRSPSPRNSNGDE
Sbjct: 228  SPQKSVSPRKSPLRESPDNRSRGGRSLTPRSVSPRGRPGASRSPSPRNSNGDE 280


>emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa subsp.
            x varia]
          Length = 286

 Score =  216 bits (551), Expect = 1e-53
 Identities = 106/109 (97%), Positives = 107/109 (98%)
 Frame = -3

Query: 1803 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 1624
            MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA
Sbjct: 1    MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 1623 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIET 1477
            FVRYKYADEA KAV+RLDGRMVDGREITVQFAKYGPNAERI KGRIIET
Sbjct: 61   FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRIIET 109



 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -3

Query: 1125 KSPRGESPDNRSRDGKSPTPRSVSPRGRPDASRSPSPRNSNGDE 994
            KSP  ESPD+RSR G+S TPRS      P ASRSPSPRNSNGDE
Sbjct: 249  KSPLRESPDSRSRGGRSFTPRS------PGASRSPSPRNSNGDE 286


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