BLASTX nr result

ID: Glycyrrhiza24_contig00005349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005349
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycin...   296   4e-78
gb|AFK33586.1| unknown [Lotus japonicus]                              295   1e-77
ref|XP_003537110.1| PREDICTED: photosystem II reaction center PS...   295   1e-77
gb|AFK35252.1| unknown [Medicago truncatula]                          287   3e-75
ref|XP_002271666.1| PREDICTED: photosystem II reaction center PS...   249   5e-64

>ref|NP_001235805.1| uncharacterized protein LOC100306491 [Glycine max]
           gi|255628701|gb|ACU14695.1| unknown [Glycine max]
          Length = 179

 Score =  296 bits (759), Expect = 4e-78
 Identities = 154/181 (85%), Positives = 166/181 (91%), Gaps = 1/181 (0%)
 Frame = +1

Query: 49  MATLHSLALSSPLSNSIQ-PRSYSVPSSIVHRSFNSSFNGQCLHMPRLRLPVTTQQHASM 225
           MATLHSLALSSPLSNS+Q PRS +VPSSIVH+S NSSFNGQ LH+P LRLPV  +Q+  M
Sbjct: 1   MATLHSLALSSPLSNSLQKPRSCAVPSSIVHQSTNSSFNGQTLHLPCLRLPVL-RQNTPM 59

Query: 226 HMPVTIMMVKPTIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDIT 405
           HMPV IMMVKP IQFIQGTDE TIPDV+LTKSRDGTNGMAIF FDQPSVFDSSGE+GDIT
Sbjct: 60  HMPV-IMMVKPKIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDIT 118

Query: 406 GFFMIDEEGVLQSVDVSAKFVNGKPSGIEAKYIMRTPREWDRFMRFMERYSNAYGLQFIK 585
           GF+MIDEEGVLQSVDVSAKFVNGKPS IEAKY+MR+PR+WDRFMRFMERYSNA GLQFIK
Sbjct: 119 GFYMIDEEGVLQSVDVSAKFVNGKPSIIEAKYVMRSPRDWDRFMRFMERYSNANGLQFIK 178

Query: 586 K 588
           K
Sbjct: 179 K 179


>gb|AFK33586.1| unknown [Lotus japonicus]
          Length = 179

 Score =  295 bits (754), Expect = 1e-77
 Identities = 155/181 (85%), Positives = 162/181 (89%), Gaps = 1/181 (0%)
 Frame = +1

Query: 49  MATLHSLALSSPLSNSIQ-PRSYSVPSSIVHRSFNSSFNGQCLHMPRLRLPVTTQQHASM 225
           MATLHSLALSSPLSNSIQ PR YSVPSSIV RS NSSFNGQ LH+P LRLP  TQ  A M
Sbjct: 1   MATLHSLALSSPLSNSIQKPRLYSVPSSIVQRSSNSSFNGQHLHLPHLRLPKLTQNTA-M 59

Query: 226 HMPVTIMMVKPTIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDIT 405
           H PV IMMVKP IQFIQG DELTIPDV+LTKSRDGTNGMAIF+F+QPSVFD+SGEVGDIT
Sbjct: 60  HTPV-IMMVKPAIQFIQGNDELTIPDVRLTKSRDGTNGMAIFKFEQPSVFDASGEVGDIT 118

Query: 406 GFFMIDEEGVLQSVDVSAKFVNGKPSGIEAKYIMRTPREWDRFMRFMERYSNAYGLQFIK 585
           G +MIDEEGVLQS DVSAKF+NGKPS IEAKYIMRTPREWDRFMRFMERYSNA GLQFIK
Sbjct: 119 GLYMIDEEGVLQSTDVSAKFINGKPSIIEAKYIMRTPREWDRFMRFMERYSNANGLQFIK 178

Query: 586 K 588
           K
Sbjct: 179 K 179


>ref|XP_003537110.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Glycine max]
          Length = 179

 Score =  295 bits (754), Expect = 1e-77
 Identities = 153/181 (84%), Positives = 163/181 (90%), Gaps = 1/181 (0%)
 Frame = +1

Query: 49  MATLHSLALSSPLSNSIQ-PRSYSVPSSIVHRSFNSSFNGQCLHMPRLRLPVTTQQHASM 225
           MATLHSLALSSPLSNS+Q P SY+VPSSIVH+S NSSFNGQ L MP LRLPV  +Q   M
Sbjct: 1   MATLHSLALSSPLSNSLQKPHSYAVPSSIVHQSTNSSFNGQTLRMPCLRLPVL-RQSTPM 59

Query: 226 HMPVTIMMVKPTIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDIT 405
           HMPV IMM KP IQFIQGTDE TIPDV+LTKSRDGTNGMAIF FDQPSVFDSSGE+GDIT
Sbjct: 60  HMPV-IMMAKPKIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDIT 118

Query: 406 GFFMIDEEGVLQSVDVSAKFVNGKPSGIEAKYIMRTPREWDRFMRFMERYSNAYGLQFIK 585
           GF+MIDEEGVLQSVDVSAKFVNGKPS IEAKY+MR+PREWDRFMRFMERYSNA GLQF+K
Sbjct: 119 GFYMIDEEGVLQSVDVSAKFVNGKPSIIEAKYVMRSPREWDRFMRFMERYSNANGLQFVK 178

Query: 586 K 588
           K
Sbjct: 179 K 179


>gb|AFK35252.1| unknown [Medicago truncatula]
          Length = 182

 Score =  287 bits (734), Expect = 3e-75
 Identities = 149/182 (81%), Positives = 161/182 (88%), Gaps = 3/182 (1%)
 Frame = +1

Query: 49  MATLHSLALSSPLSNSIQ-PRSYSVPSSIVHRSFN--SSFNGQCLHMPRLRLPVTTQQHA 219
           MAT+HSLA SSPL NSIQ PRSYS  S I+H S N  SSFNGQ LH+P LRLP+ TQ+  
Sbjct: 1   MATMHSLAFSSPLYNSIQKPRSYSATSLIIHGSLNLNSSFNGQHLHVPSLRLPMITQK-T 59

Query: 220 SMHMPVTIMMVKPTIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGD 399
            MHMPV +M  KP IQFIQG+DELTIPDVKLTKS+DGTNGMAIFRFDQPSVFDSSGEVGD
Sbjct: 60  PMHMPVIMMAGKPKIQFIQGSDELTIPDVKLTKSKDGTNGMAIFRFDQPSVFDSSGEVGD 119

Query: 400 ITGFFMIDEEGVLQSVDVSAKFVNGKPSGIEAKYIMRTPREWDRFMRFMERYSNAYGLQF 579
           ITGF+MIDEEGVLQSVDV+AKFVNGKPSGIEAKYIMRTPR+WDRFMRFMERYS+A GLQF
Sbjct: 120 ITGFYMIDEEGVLQSVDVNAKFVNGKPSGIEAKYIMRTPRDWDRFMRFMERYSDANGLQF 179

Query: 580 IK 585
           IK
Sbjct: 180 IK 181


>ref|XP_002271666.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic [Vitis vinifera]
           gi|297744226|emb|CBI37196.3| unnamed protein product
           [Vitis vinifera]
          Length = 179

 Score =  249 bits (637), Expect = 5e-64
 Identities = 129/181 (71%), Positives = 149/181 (82%), Gaps = 1/181 (0%)
 Frame = +1

Query: 49  MATLHSLALSSPLSNSIQPRSYSVPSS-IVHRSFNSSFNGQCLHMPRLRLPVTTQQHASM 225
           MA L SLA +SPLS+  +    S  SS  VHRS +SSFNG+ LH+PR +      + +S 
Sbjct: 1   MAALQSLAFTSPLSHCCKQSPLSGLSSWAVHRSAHSSFNGRSLHLPRPQWAAL--KRSSS 58

Query: 226 HMPVTIMMVKPTIQFIQGTDELTIPDVKLTKSRDGTNGMAIFRFDQPSVFDSSGEVGDIT 405
              +  MMVKPTIQFIQGTDE T+PDV+LT+SRDGTNGMAIF+F+QPSVFDSSGEVGDIT
Sbjct: 59  TSGLITMMVKPTIQFIQGTDEQTVPDVRLTQSRDGTNGMAIFKFEQPSVFDSSGEVGDIT 118

Query: 406 GFFMIDEEGVLQSVDVSAKFVNGKPSGIEAKYIMRTPREWDRFMRFMERYSNAYGLQFIK 585
           GF+MIDEEGVLQSVDVSAKF+NGKPSGIEAKY+MR+PREWDRFMRFMERYSN  GLQF+K
Sbjct: 119 GFYMIDEEGVLQSVDVSAKFINGKPSGIEAKYVMRSPREWDRFMRFMERYSNENGLQFVK 178

Query: 586 K 588
           K
Sbjct: 179 K 179


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