BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005343
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523440.1| PREDICTED: replication factor C subunit 5-li...   578   e-162
ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-li...   577   e-162
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc...   574   e-161
ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   555   e-155
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   544   e-152

>ref|XP_003523440.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 363

 Score =  578 bits (1489), Expect = e-162
 Identities = 296/311 (95%), Positives = 305/311 (98%)
 Frame = +2

Query: 2   DVAAHRDIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 181
           DVAAHRDIV+TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNAS
Sbjct: 53  DVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNAS 112

Query: 182 DDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR 361
           DDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR
Sbjct: 113 DDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR 172

Query: 362 FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSN 541
           FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAE LDV+DSGLAALVRLSN
Sbjct: 173 FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAALVRLSN 232

Query: 542 GDMRKALNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIK 721
           GDMRKALNILQSTHMASQQITE+ VYLCTGNPLPKDIEQISYWLLNEQF DSFKRI E+K
Sbjct: 233 GDMRKALNILQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMK 292

Query: 722 TRKGLAVVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFT 901
           TRKGLA+VDIVREVT+FVFKIKMP AVRVQLMNDLADIEYRL+FGCNDKLQLGSVIASF+
Sbjct: 293 TRKGLALVDIVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFS 352

Query: 902 RARSALVAAAT 934
           RARSALVAAAT
Sbjct: 353 RARSALVAAAT 363


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 361

 Score =  577 bits (1488), Expect = e-162
 Identities = 296/311 (95%), Positives = 304/311 (97%)
 Frame = +2

Query: 2   DVAAHRDIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 181
           DVAAHRDIV+TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNAS
Sbjct: 51  DVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNAS 110

Query: 182 DDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR 361
           DDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR
Sbjct: 111 DDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR 170

Query: 362 FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSN 541
           FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAE LDV+DSGLAA VRLSN
Sbjct: 171 FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSN 230

Query: 542 GDMRKALNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIK 721
           GDMRKALNILQSTHMASQQITE+AVYLCTGNPLPKDIE ISYWLLNEQF DSFKRI E+K
Sbjct: 231 GDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMK 290

Query: 722 TRKGLAVVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFT 901
           TRKGLA++DIVREVTMFVFKIKMP AVRVQLMNDLADIEYRL+FGCNDKLQLGSVIASFT
Sbjct: 291 TRKGLALIDIVREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFT 350

Query: 902 RARSALVAAAT 934
           RARSALVAAAT
Sbjct: 351 RARSALVAAAT 361


>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
           gi|355491087|gb|AES72290.1| Replication factor C subunit
           [Medicago truncatula]
          Length = 355

 Score =  574 bits (1479), Expect = e-161
 Identities = 290/310 (93%), Positives = 305/310 (98%)
 Frame = +2

Query: 2   DVAAHRDIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 181
           DVAAHRDIV+TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS
Sbjct: 45  DVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 104

Query: 182 DDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR 361
           DDRGIDVVRQQIQDFASTQSLSFGVK SVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR
Sbjct: 105 DDRGIDVVRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR 164

Query: 362 FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSN 541
           FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVI AE LDVQDSGL+ALVRLSN
Sbjct: 165 FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSN 224

Query: 542 GDMRKALNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIK 721
           GDMRKALNILQSTHMASQQITE+AVYLCTGNPLPKDIEQISYWLLNEQ+++SFKRI+++K
Sbjct: 225 GDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMK 284

Query: 722 TRKGLAVVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFT 901
           TRKGLA++DIVREVTMFVFKI MP AVRVQL+NDLADIEYRL+FGCNDKLQLGSV+ASFT
Sbjct: 285 TRKGLALIDIVREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFT 344

Query: 902 RARSALVAAA 931
           RARSA+VAAA
Sbjct: 345 RARSAMVAAA 354


>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
           gi|302141794|emb|CBI18997.3| unnamed protein product
           [Vitis vinifera]
          Length = 360

 Score =  555 bits (1429), Expect = e-155
 Identities = 282/310 (90%), Positives = 297/310 (95%)
 Frame = +2

Query: 2   DVAAHRDIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 181
           DVAAHRDIV+TIDRLT+ENRLPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNAS
Sbjct: 50  DVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNAS 109

Query: 182 DDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR 361
           DDRGIDVVRQQIQDFASTQS SFG KSSVKLVLLDEADAMTKDAQFALRRVIEKYTK+TR
Sbjct: 110 DDRGIDVVRQQIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTR 169

Query: 362 FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSN 541
           FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVI AE+LDV +SGLAALVRLS+
Sbjct: 170 FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSS 229

Query: 542 GDMRKALNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIK 721
           GDMRKALNILQSTHMASQQITE+AVYLCTGNPLPKDIEQISYWLLNE F  SF RI E+K
Sbjct: 230 GDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVK 289

Query: 722 TRKGLAVVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFT 901
            RKGLA+VD+VREVTMFVFKIKMP  VRVQL+NDLADIEYRL+FGCNDKLQLGS+IASFT
Sbjct: 290 MRKGLALVDVVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFT 349

Query: 902 RARSALVAAA 931
           RAR+ALVAAA
Sbjct: 350 RARAALVAAA 359


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540562|gb|EEF42129.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 360

 Score =  544 bits (1402), Expect = e-152
 Identities = 275/310 (88%), Positives = 295/310 (95%)
 Frame = +2

Query: 2   DVAAHRDIVETIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNAS 181
           DVAAHRDIV+TIDRLT ENRLPHLLLYGPPGTGKTSTILAVARKLYG QYHNMILELNAS
Sbjct: 50  DVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNAS 109

Query: 182 DDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTR 361
           DDRGIDVVRQQIQDFASTQS SF  KS+VKLVLLDEADAMTKDAQFALRRVIEKYTK+TR
Sbjct: 110 DDRGIDVVRQQIQDFASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTR 169

Query: 362 FALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEELDVQDSGLAALVRLSN 541
           FALICNHVNKIIPALQSRCTRFRFAPLD +HVT+RLKHVI+AE LDV + GLAA+VRLSN
Sbjct: 170 FALICNHVNKIIPALQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSN 229

Query: 542 GDMRKALNILQSTHMASQQITEDAVYLCTGNPLPKDIEQISYWLLNEQFTDSFKRIHEIK 721
           GDMRKALNILQSTHMASQQITE+AV+LCTGNPLPKDI+QISYWLLNE F +SFKRI EIK
Sbjct: 230 GDMRKALNILQSTHMASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIK 289

Query: 722 TRKGLAVVDIVREVTMFVFKIKMPPAVRVQLMNDLADIEYRLTFGCNDKLQLGSVIASFT 901
           T+KGLA+VDIVREVTMFVFKIKMP  VRVQL+ND+ADIEYRL+FGC+DKLQLGS++ASFT
Sbjct: 290 TKKGLALVDIVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLVASFT 349

Query: 902 RARSALVAAA 931
            ARSALVAAA
Sbjct: 350 WARSALVAAA 359