BLASTX nr result

ID: Glycyrrhiza24_contig00005319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005319
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU95107.1| PetD, partial (chloroplast) [Balanops pachyphylla...   328   6e-88
gb|AFA26988.1| cytochrome b6/f complex subunit IV, partial [Noli...   328   6e-88
ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot ...   328   6e-88
gb|AFU95128.1| PetD, partial (chloroplast) [Ploiarium sp. CCD-2012]   328   8e-88
gb|AFU95120.1| PetD, partial (chloroplast) [Humiria balsamifera]      328   8e-88

>gb|AFU95107.1| PetD, partial (chloroplast) [Balanops pachyphylla]
           gi|408900699|gb|AFU95117.1| PetD, partial (chloroplast)
           [Galearia maingayi]
          Length = 164

 Score =  328 bits (842), Expect = 6e-88
 Identities = 162/164 (98%), Positives = 163/164 (99%)
 Frame = -3

Query: 784 TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 605
           TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG
Sbjct: 1   TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 60

Query: 604 EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 425
           EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP
Sbjct: 61  EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 120

Query: 424 FRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 293
           FRRPVATTVFLIGTAVALWLGIGATLPI+KSLTLGLF IDSIVK
Sbjct: 121 FRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQIDSIVK 164


>gb|AFA26988.1| cytochrome b6/f complex subunit IV, partial [Nolina atopocarpa]
          Length = 165

 Score =  328 bits (842), Expect = 6e-88
 Identities = 162/164 (98%), Positives = 163/164 (99%)
 Frame = -3

Query: 784 TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 605
           TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG
Sbjct: 2   TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 61

Query: 604 EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 425
           EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP
Sbjct: 62  EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 121

Query: 424 FRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 293
           FRRPVATTVFLIGTAVALWLGIGATLPI+KSLTLGLF IDSIVK
Sbjct: 122 FRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQIDSIVK 165


>ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot esculenta]
           gi|225544154|ref|YP_002720143.1| petD [Jatropha curcas]
           gi|326909423|ref|YP_004327693.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
           gi|157695916|gb|ABV66185.1| cytochrome b6/f complex
           subunit IV [Manihot esculenta]
           gi|224979595|gb|ACN72722.1| petD [Jatropha curcas]
           gi|290489368|gb|ADD31068.1| cytochrome b6/f complex
           subunit IV protein [Heuchera sanguinea]
           gi|290489370|gb|ADD31069.1| cytochrome b6/f complex
           subunit IV protein [Liquidambar styraciflua]
           gi|308523537|gb|ADO33587.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
          Length = 167

 Score =  328 bits (842), Expect = 6e-88
 Identities = 162/164 (98%), Positives = 163/164 (99%)
 Frame = -3

Query: 784 TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 605
           TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG
Sbjct: 4   TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 63

Query: 604 EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 425
           EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP
Sbjct: 64  EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 123

Query: 424 FRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 293
           FRRPVATTVFLIGTAVALWLGIGATLPI+KSLTLGLF IDSIVK
Sbjct: 124 FRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQIDSIVK 167


>gb|AFU95128.1| PetD, partial (chloroplast) [Ploiarium sp. CCD-2012]
          Length = 164

 Score =  328 bits (841), Expect = 8e-88
 Identities = 161/164 (98%), Positives = 163/164 (99%)
 Frame = -3

Query: 784 TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 605
           TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG
Sbjct: 1   TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 60

Query: 604 EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 425
           EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP
Sbjct: 61  EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 120

Query: 424 FRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 293
           FRRPVATTVFLIGTAVALWLGIGATLPI+KSLTLGLF IDS+VK
Sbjct: 121 FRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQIDSVVK 164


>gb|AFU95120.1| PetD, partial (chloroplast) [Humiria balsamifera]
          Length = 164

 Score =  328 bits (841), Expect = 8e-88
 Identities = 162/164 (98%), Positives = 162/164 (98%)
 Frame = -3

Query: 784 TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 605
           TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG
Sbjct: 1   TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIG 60

Query: 604 EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 425
           EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP
Sbjct: 61  EPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNP 120

Query: 424 FRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF*IDSIVK 293
           FRRPVATTVFLIGT VALWLGIGATLPIEKSLTLGLF IDSIVK
Sbjct: 121 FRRPVATTVFLIGTGVALWLGIGATLPIEKSLTLGLFQIDSIVK 164


Top