BLASTX nr result

ID: Glycyrrhiza24_contig00005313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005313
         (1487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519299.1| PREDICTED: KH domain-containing protein At2g...   514   e-143
ref|XP_003544944.1| PREDICTED: KH domain-containing protein At2g...   498   e-138
ref|XP_003616061.1| KH domain-containing protein [Medicago trunc...   493   e-137
gb|ACJ84729.1| unknown [Medicago truncatula]                          493   e-137
gb|AFK41792.1| unknown [Lotus japonicus]                              485   e-134

>ref|XP_003519299.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine max]
          Length = 285

 Score =  514 bits (1323), Expect = e-143
 Identities = 254/284 (89%), Positives = 270/284 (95%)
 Frame = +2

Query: 233  MSGLYNQISSPSTARANSPNINMRSNLDVDSQYLTELLEEHQKLGPFMQVLPLCTRLLNQ 412
            MSGLYNQISSPSTARANSPNINMRSN + +SQYLTELL EHQKLGPFMQVLPLCTRLLNQ
Sbjct: 1    MSGLYNQISSPSTARANSPNINMRSNFEAESQYLTELLAEHQKLGPFMQVLPLCTRLLNQ 60

Query: 413  EILRVSGKNGLMQNKGFSDYDRVQFGSPKPSLMPSLDITPNFTGWNSLSHERLGGVQGLN 592
            EILRVSGKNG+MQN+GFSDYDRVQFGSPKP+LMPSLDI PNFTGWNSLSHE L GVQGLN
Sbjct: 61   EILRVSGKNGMMQNQGFSDYDRVQFGSPKPNLMPSLDIQPNFTGWNSLSHEGLAGVQGLN 120

Query: 593  VDWQTSPVVSNSHIVKRMLRLDIPSENYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 772
            VDWQTSP V +SHIVKR+LRLDI +++YPNFN VGRLLGPRGNSLKRVEATTGCRVFIRG
Sbjct: 121  VDWQTSPGVPSSHIVKRILRLDIANDSYPNFNLVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 773  KGSIKDLDKEELLRGRPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIEELLKPVDES 952
            KGSIK+LDKEELLRGRPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIEELLKP+DES
Sbjct: 181  KGSIKELDKEELLRGRPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIEELLKPMDES 240

Query: 953  QDMYKRQQLRELAMINSNFREESPQLSGSVSPFTSSEIKRAKTD 1084
            QD+YKRQQLRELAM+NSNFREESPQLS S S F S+E+KRAKTD
Sbjct: 241  QDLYKRQQLRELAMLNSNFREESPQLSASPSTFNSNEMKRAKTD 284


>ref|XP_003544944.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine max]
          Length = 276

 Score =  498 bits (1283), Expect = e-138
 Identities = 247/276 (89%), Positives = 262/276 (94%)
 Frame = +2

Query: 233  MSGLYNQISSPSTARANSPNINMRSNLDVDSQYLTELLEEHQKLGPFMQVLPLCTRLLNQ 412
            MSGLYNQISSPSTARANSPNINMRSN +V+SQYLTELL EHQKLGPFMQVLPLCTRLLNQ
Sbjct: 1    MSGLYNQISSPSTARANSPNINMRSNFEVESQYLTELLAEHQKLGPFMQVLPLCTRLLNQ 60

Query: 413  EILRVSGKNGLMQNKGFSDYDRVQFGSPKPSLMPSLDITPNFTGWNSLSHERLGGVQGLN 592
            EILRVSGKNGLMQN+G SDYDRVQFGSPKP+LMPSLDI PNFTGWNSLSHE L GVQGLN
Sbjct: 61   EILRVSGKNGLMQNQGLSDYDRVQFGSPKPNLMPSLDIQPNFTGWNSLSHEGLAGVQGLN 120

Query: 593  VDWQTSPVVSNSHIVKRMLRLDIPSENYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 772
            VDWQTSP V +SHIVKR LRLDI +++YPNFN VGRLLGPRGNSLKRVEATTGCRVFIRG
Sbjct: 121  VDWQTSPGVPSSHIVKRTLRLDIANDSYPNFNLVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 773  KGSIKDLDKEELLRGRPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIEELLKPVDES 952
            KGSIK+LDKEELLRGRPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIEELLKP+DES
Sbjct: 181  KGSIKELDKEELLRGRPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIEELLKPMDES 240

Query: 953  QDMYKRQQLRELAMINSNFREESPQLSGSVSPFTSS 1060
            QD++KRQQLRELAM+NSNFRE+SPQLSGS S F S+
Sbjct: 241  QDLHKRQQLRELAMLNSNFREDSPQLSGSPSTFNSN 276


>ref|XP_003616061.1| KH domain-containing protein [Medicago truncatula]
            gi|355517396|gb|AES99019.1| KH domain-containing protein
            [Medicago truncatula]
          Length = 281

 Score =  493 bits (1270), Expect = e-137
 Identities = 249/287 (86%), Positives = 267/287 (93%), Gaps = 2/287 (0%)
 Frame = +2

Query: 233  MSGLYN-QISSPSTARANSPNINMRSNLDVDSQYLTELLEEHQKLGPFMQVLPLCTRLLN 409
            MSGLYN QISSP TARANSPNINMRSN DVDSQYLTEL+ E+QKLGPFMQVLPLCTRLLN
Sbjct: 1    MSGLYNNQISSPGTARANSPNINMRSNFDVDSQYLTELVAEYQKLGPFMQVLPLCTRLLN 60

Query: 410  QEILRVSGKNGLMQNKGFSDYDRVQFGSPKPSLMPSLDITPNFTGWNSLSHERLGGVQGL 589
            QEILR SGK+GLMQN+GFSDYDRVQFGS KPSLMPSLD T +FTGWNSLSHE      GL
Sbjct: 61   QEILRASGKSGLMQNQGFSDYDRVQFGSTKPSLMPSLDTTSSFTGWNSLSHE------GL 114

Query: 590  NVDWQTSPVVSNSHIVKRMLRLDIPSENYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIR 769
            NVDWQ +P +SNSHIVK+MLRLDIP +N+P FNFVGRLLGPRGNSLKRVEATTGCRVFIR
Sbjct: 115  NVDWQRAPAISNSHIVKKMLRLDIPHDNHPTFNFVGRLLGPRGNSLKRVEATTGCRVFIR 174

Query: 770  GKGSIKDLDKEELLRGRPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIEELLKPVDE 949
            GKGSIKD DKEELLRGRPG+EHLNEPLH+LIEAELPVNVVD+RLRQAQEIIEELLKPVDE
Sbjct: 175  GKGSIKDFDKEELLRGRPGFEHLNEPLHILIEAELPVNVVDLRLRQAQEIIEELLKPVDE 234

Query: 950  SQDMYKRQQLRELAMINSNFREESPQLSGSVSPFTSSE-IKRAKTDQ 1087
            SQD+YKRQQLRELAM+NS+FREESPQLSGS+SPFTS+E IKRAKTDQ
Sbjct: 235  SQDIYKRQQLRELAMLNSSFREESPQLSGSLSPFTSNEMIKRAKTDQ 281


>gb|ACJ84729.1| unknown [Medicago truncatula]
          Length = 281

 Score =  493 bits (1270), Expect = e-137
 Identities = 249/287 (86%), Positives = 267/287 (93%), Gaps = 2/287 (0%)
 Frame = +2

Query: 233  MSGLYN-QISSPSTARANSPNINMRSNLDVDSQYLTELLEEHQKLGPFMQVLPLCTRLLN 409
            MSGLYN QISSP TARANSPNINMRSN DVDSQYLTEL+ E+QKLGPFMQVLPLCTRLLN
Sbjct: 1    MSGLYNNQISSPGTARANSPNINMRSNFDVDSQYLTELVAEYQKLGPFMQVLPLCTRLLN 60

Query: 410  QEILRVSGKNGLMQNKGFSDYDRVQFGSPKPSLMPSLDITPNFTGWNSLSHERLGGVQGL 589
            QEILR SGK+GLMQN+GFSDYDRVQFGS KPSLMPSLD T +FTGWNSLSHE      GL
Sbjct: 61   QEILRASGKSGLMQNQGFSDYDRVQFGSTKPSLMPSLDATSSFTGWNSLSHE------GL 114

Query: 590  NVDWQTSPVVSNSHIVKRMLRLDIPSENYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIR 769
            NVDWQ +P +SNSHIVK+MLRLDIP +N+P FNFVGRLLGPRGNSLKRVEATTGCRVFIR
Sbjct: 115  NVDWQRAPAISNSHIVKKMLRLDIPHDNHPTFNFVGRLLGPRGNSLKRVEATTGCRVFIR 174

Query: 770  GKGSIKDLDKEELLRGRPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIEELLKPVDE 949
            GKGSIKD DKEELLRGRPG+EHLNEPLH+LIEAELPVNVVD+RLRQAQEIIEELLKPVDE
Sbjct: 175  GKGSIKDFDKEELLRGRPGFEHLNEPLHILIEAELPVNVVDLRLRQAQEIIEELLKPVDE 234

Query: 950  SQDMYKRQQLRELAMINSNFREESPQLSGSVSPFTSSE-IKRAKTDQ 1087
            SQD+YKRQQLRELAM+NS+FREESPQLSGS+SPFTS+E IKRAKTDQ
Sbjct: 235  SQDIYKRQQLRELAMLNSSFREESPQLSGSLSPFTSNEMIKRAKTDQ 281


>gb|AFK41792.1| unknown [Lotus japonicus]
          Length = 279

 Score =  485 bits (1248), Expect = e-134
 Identities = 243/285 (85%), Positives = 264/285 (92%)
 Frame = +2

Query: 233  MSGLYNQISSPSTARANSPNINMRSNLDVDSQYLTELLEEHQKLGPFMQVLPLCTRLLNQ 412
            MSGLY QISSP+TARA+SPNIN+RSN +VDSQYL ELLEE+QKL PFMQVLPLCTRLLNQ
Sbjct: 1    MSGLYYQISSPATARASSPNINIRSNFNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQ 60

Query: 413  EILRVSGKNGLMQNKGFSDYDRVQFGSPKPSLMPSLDITPNFTGWNSLSHERLGGVQGLN 592
            EILRVSGKNGL+QN+GFSDYDRVQFGS  PSL+PSL+ T NFTGWNSLSH+      GLN
Sbjct: 61   EILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLSHK------GLN 114

Query: 593  VDWQTSPVVSNSHIVKRMLRLDIPSENYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 772
            VDWQT+P V NS IVKR+LRLDIPS++YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG
Sbjct: 115  VDWQTTPSVPNSPIVKRILRLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 174

Query: 773  KGSIKDLDKEELLRGRPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIEELLKPVDES 952
            +GSIKD DKEE+LRG+PGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIE LLKP DE+
Sbjct: 175  QGSIKDPDKEEVLRGKPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPADET 234

Query: 953  QDMYKRQQLRELAMINSNFREESPQLSGSVSPFTSSEIKRAKTDQ 1087
            QD YKRQQLRELAM+NSNFREESPQLSGS+SPFTS+EIKRAKTDQ
Sbjct: 235  QDFYKRQQLRELAMLNSNFREESPQLSGSLSPFTSNEIKRAKTDQ 279


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