BLASTX nr result

ID: Glycyrrhiza24_contig00005306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005306
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    82   5e-14
gb|ACU22680.1| unknown [Glycine max]                                   82   5e-14
ref|XP_003602615.1| F-box/kelch-repeat protein [Medicago truncat...    75   7e-12
ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, ...    74   9e-12
ref|XP_003594508.1| F-box family protein [Medicago truncatula] g...    74   9e-12

>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 46/72 (63%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
 Frame = -3

Query: 204 KVVAVFLVDC----KTQVSIHTLGTDSWRRIQEFPYGSPTCEPGIFISGTVNWLAFAASS 37
           KVVA+F  +C    +TQV + TLGTDSWRRIQEFP G P  E G F+SGTVNWLA   SS
Sbjct: 199 KVVAIFCYECDGRYETQVKVLTLGTDSWRRIQEFPSGLPFDESGKFVSGTVNWLASNDSS 258

Query: 36  SWPVIVSLDLGK 1
           S  +IVSLDL K
Sbjct: 259 SL-IIVSLDLHK 269


>gb|ACU22680.1| unknown [Glycine max]
          Length = 393

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 46/72 (63%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
 Frame = -3

Query: 204 KVVAVFLVDC----KTQVSIHTLGTDSWRRIQEFPYGSPTCEPGIFISGTVNWLAFAASS 37
           KVVA+F  +C    +TQV + TLGTDSWRRIQEFP G P  E G F+SGTVNWLA   SS
Sbjct: 199 KVVAIFCYECDGRYETQVKVLTLGTDSWRRIQEFPSGLPFDESGKFVSGTVNWLASNDSS 258

Query: 36  SWPVIVSLDLGK 1
           S  +IVSLDL K
Sbjct: 259 SL-IIVSLDLHK 269


>ref|XP_003602615.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355491663|gb|AES72866.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 289

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
 Frame = -3

Query: 204 KVVAV-FLVDCKTQVSIHTLGTDSWRRIQEFPYGSPTCEPGIFISGTVNWLAF--AASSS 34
           KVVAV F  D   +V++HTLGT+ WRRIQ+FPY      PG+F+SGT+NWL +  + S S
Sbjct: 151 KVVAVSFFNDKNREVNVHTLGTNYWRRIQDFPYSQSIPGPGVFVSGTINWLIYDVSGSCS 210

Query: 33  WPVIVSLDL 7
           +  IVSLDL
Sbjct: 211 FHAIVSLDL 219


>ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, partial [Medicago
           truncatula] gi|355504317|gb|AES85520.1| Nuclear
           transcription factor Y subunit A-7, partial [Medicago
           truncatula]
          Length = 455

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
 Frame = -3

Query: 204 KVVAVFLV-----DCKTQVSIHTLGTDSWRRIQEFPYGSPTCEPGIFISGTVNWLAFAAS 40
           KVVAV+       D KTQV +HTLGT+ WRRI + P+G P  E G F+SGTVNWLA   S
Sbjct: 205 KVVAVYCFESDNGDYKTQVKVHTLGTNFWRRIHDLPFGVPFDESGKFVSGTVNWLASNDS 264

Query: 39  S-SWPVIVSLDLGK 1
           S +  +IVSLDL K
Sbjct: 265 SYTSSIIVSLDLEK 278


>ref|XP_003594508.1| F-box family protein [Medicago truncatula]
           gi|355483556|gb|AES64759.1| F-box family protein
           [Medicago truncatula]
          Length = 597

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
 Frame = -3

Query: 204 KVVAVFLV-----DCKTQVSIHTLGTDSWRRIQEFPYGSPTCEPGIFISGTVNWLAFAAS 40
           KVVAV+       D KTQV +HTLGT+ WRRI + P+G P  E G F+SGTVNWLA   S
Sbjct: 205 KVVAVYCFESDNGDYKTQVKVHTLGTNFWRRIHDLPFGVPFDESGKFVSGTVNWLASNDS 264

Query: 39  S-SWPVIVSLDLGK 1
           S +  +IVSLDL K
Sbjct: 265 SYTSSIIVSLDLEK 278


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