BLASTX nr result
ID: Glycyrrhiza24_contig00005304
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00005304 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527858.1| chloride channel clc, putative [Ricinus comm... 106 2e-21 gb|ADW93911.1| chloride channel 1 [Hordeum vulgare subsp. vulgare] 105 3e-21 emb|CAA64829.1| C1C-Nt1 [Nicotiana tabacum] 105 4e-21 emb|CBI29647.3| unnamed protein product [Vitis vinifera] 105 5e-21 ref|XP_002268066.1| PREDICTED: chloride channel protein CLC-c [V... 105 5e-21 >ref|XP_002527858.1| chloride channel clc, putative [Ricinus communis] gi|223532782|gb|EEF34561.1| chloride channel clc, putative [Ricinus communis] Length = 754 Score = 106 bits (265), Expect = 2e-21 Identities = 55/89 (61%), Positives = 62/89 (69%) Frame = +2 Query: 2 TMRMTVSXXXXXXXXXXXXXXXXXXXXXXXXSKSVADCLNKGVYDQIVEMKGLPYMEAHA 181 TMRMTVS SK+VAD NKGVYDQIV+MKGLPYMEAHA Sbjct: 506 TMRMTVSLCIILLELTNDLLMLPLMMLVLLISKTVADSFNKGVYDQIVKMKGLPYMEAHA 565 Query: 182 KSYMRQLVASDVVSGPLITFSGIEKVGNV 268 + YMRQLVASDVVSGPL++FSG+EKVGN+ Sbjct: 566 EPYMRQLVASDVVSGPLVSFSGVEKVGNI 594 >gb|ADW93911.1| chloride channel 1 [Hordeum vulgare subsp. vulgare] Length = 799 Score = 105 bits (263), Expect = 3e-21 Identities = 54/89 (60%), Positives = 61/89 (68%) Frame = +2 Query: 2 TMRMTVSXXXXXXXXXXXXXXXXXXXXXXXXSKSVADCLNKGVYDQIVEMKGLPYMEAHA 181 TMRMTVS SK++ADC NKGVYDQIV MKGLP+MEAHA Sbjct: 550 TMRMTVSVCVILLELTNELHMLPLVMLVLLISKTIADCFNKGVYDQIVVMKGLPFMEAHA 609 Query: 182 KSYMRQLVASDVVSGPLITFSGIEKVGNV 268 + YMR LVASDVVSGPLI+FSG+EKVGN+ Sbjct: 610 EPYMRHLVASDVVSGPLISFSGVEKVGNI 638 >emb|CAA64829.1| C1C-Nt1 [Nicotiana tabacum] Length = 780 Score = 105 bits (262), Expect = 4e-21 Identities = 54/89 (60%), Positives = 60/89 (67%) Frame = +2 Query: 2 TMRMTVSXXXXXXXXXXXXXXXXXXXXXXXXSKSVADCLNKGVYDQIVEMKGLPYMEAHA 181 TMRMTVS SK+VADC N GVYDQIV+MKGLPY+EAHA Sbjct: 531 TMRMTVSICVILLELTDDLLMLPLVMLVLLISKTVADCFNHGVYDQIVKMKGLPYLEAHA 590 Query: 182 KSYMRQLVASDVVSGPLITFSGIEKVGNV 268 + YMRQLVA DV SGPLITFSG+EKVGN+ Sbjct: 591 EPYMRQLVAGDVCSGPLITFSGVEKVGNI 619 >emb|CBI29647.3| unnamed protein product [Vitis vinifera] Length = 742 Score = 105 bits (261), Expect = 5e-21 Identities = 55/89 (61%), Positives = 58/89 (65%) Frame = +2 Query: 2 TMRMTVSXXXXXXXXXXXXXXXXXXXXXXXXSKSVADCLNKGVYDQIVEMKGLPYMEAHA 181 TMRMTVS SK+VADC NKGVYDQIV MKG PYMEAHA Sbjct: 494 TMRMTVSLCIILLELTNDLLMLPLMMLVLLISKTVADCFNKGVYDQIVRMKGFPYMEAHA 553 Query: 182 KSYMRQLVASDVVSGPLITFSGIEKVGNV 268 + YMR LVA DVVSGPLITFS IEKVGN+ Sbjct: 554 EPYMRHLVAKDVVSGPLITFSSIEKVGNI 582 >ref|XP_002268066.1| PREDICTED: chloride channel protein CLC-c [Vitis vinifera] gi|301318128|gb|ADK66979.1| chloride channel ClC1 [Vitis vinifera] Length = 771 Score = 105 bits (261), Expect = 5e-21 Identities = 55/89 (61%), Positives = 58/89 (65%) Frame = +2 Query: 2 TMRMTVSXXXXXXXXXXXXXXXXXXXXXXXXSKSVADCLNKGVYDQIVEMKGLPYMEAHA 181 TMRMTVS SK+VADC NKGVYDQIV MKG PYMEAHA Sbjct: 523 TMRMTVSLCIILLELTNDLLMLPLMMLVLLISKTVADCFNKGVYDQIVRMKGFPYMEAHA 582 Query: 182 KSYMRQLVASDVVSGPLITFSGIEKVGNV 268 + YMR LVA DVVSGPLITFS IEKVGN+ Sbjct: 583 EPYMRHLVAKDVVSGPLITFSSIEKVGNI 611