BLASTX nr result

ID: Glycyrrhiza24_contig00005303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005303
         (1508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592890.1| Chloride channel protein CLC-c [Medicago tru...   455   e-125
ref|XP_002527858.1| chloride channel clc, putative [Ricinus comm...   438   e-120
ref|XP_002331119.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   427   e-117
gb|ADF30876.1| chloride channel protein [Citrus trifoliata]           422   e-115
emb|CBI29647.3| unnamed protein product [Vitis vinifera]              421   e-115

>ref|XP_003592890.1| Chloride channel protein CLC-c [Medicago truncatula]
            gi|92893907|gb|ABE91957.1| CBS; Cl- channel, voltage
            gated; Twin-arginine translocation pathway signal
            [Medicago truncatula] gi|355481938|gb|AES63141.1|
            Chloride channel protein CLC-c [Medicago truncatula]
          Length = 761

 Score =  455 bits (1171), Expect = e-125
 Identities = 239/390 (61%), Positives = 274/390 (70%), Gaps = 4/390 (1%)
 Frame = +2

Query: 32   LQYNSFQCPANHYNDLTSLFFTTNDDAIRNLFIAGSADNKGSFRISSLVIFFVAIYLLGI 211
            + Y++FQCP NHYNDL+SLFFTTNDDAIR+LF  GSA     F++SSL+IFFVAIYLLGI
Sbjct: 400  IHYDNFQCPPNHYNDLSSLFFTTNDDAIRSLFNDGSASANTGFQLSSLIIFFVAIYLLGI 459

Query: 212  VTYGIAIPSGLFIPVILAGASYGRLVGSVLGPFTVLDTGLFXXXXXXXXXXXXXXXXXXX 391
            VTYG+AIPSGLFIPVILAGASYGRL+G+V+ PFT LDTGLF                   
Sbjct: 460  VTYGVAIPSGLFIPVILAGASYGRLIGTVMAPFTALDTGLFALLGAASFL---------- 509

Query: 392  XXXXXXXXXXXXXXXXXXGGTMRMTVSICIIXXXXXXXXXXXXXXXXXXXISKTVADCFN 571
                              GGTMRMTVS+C+I                   ISKTVADCFN
Sbjct: 510  ------------------GGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADCFN 551

Query: 572  KGVYDQIVEIKGLPYMEAHAEPYMRHLVASDVVSGPLFTFSGVEKVGNIVYALKTTGHHG 751
            KGVYDQIV +KGLPYMEAHAEPYMR+LVA DVVSGPLF+F G+EKVGNI++ALK T HHG
Sbjct: 552  KGVYDQIVALKGLPYMEAHAEPYMRNLVAGDVVSGPLFSFCGIEKVGNILHALKVTEHHG 611

Query: 752  FPVIDDPPFSDAPQXXXXXXXXXXXXXXQHRT-FTAHKVMTGPTI---FKAFDFAKPGLG 919
            FPV+D+PP +DAP+              +H+T FT  +VMTG TI    KA DFAKPGLG
Sbjct: 612  FPVVDEPPLTDAPELCGLVLRSHLWVLLKHKTLFTRERVMTGSTIVNKVKARDFAKPGLG 671

Query: 920  RGIKLEDLDISEDEMEMFVDLRPITNTSPYTVVETMSLAKAAXXXXXXXXXXXXVVPNTL 1099
            RGI++EDLDIS++EMEM+VDL PITNTSPYTVVETMSLAKAA            VVP   
Sbjct: 672  RGIRVEDLDISQEEMEMYVDLHPITNTSPYTVVETMSLAKAALLFRELGLRHLLVVPKKP 731

Query: 1100 GRPPIVGILTRHDFMPRHVLGLFPHLKPRK 1189
            GRPPIVGILTRHDFM  ++LGLFP+L P K
Sbjct: 732  GRPPIVGILTRHDFMHDYILGLFPNLNPHK 761


>ref|XP_002527858.1| chloride channel clc, putative [Ricinus communis]
            gi|223532782|gb|EEF34561.1| chloride channel clc,
            putative [Ricinus communis]
          Length = 754

 Score =  438 bits (1126), Expect = e-120
 Identities = 231/387 (59%), Positives = 269/387 (69%), Gaps = 3/387 (0%)
 Frame = +2

Query: 38   YNSFQCPANHYNDLTSLFFTTNDDAIRNLFIAGSADNKGSFRISSLVIFFVAIYLLGIVT 217
            + +FQCP+NHYNDL SLFF TNDDAIRNLF +GS   + SF++S+L++FFVA+Y LGI+T
Sbjct: 399  FKNFQCPSNHYNDLASLFFNTNDDAIRNLFTSGS---EKSFQVSTLLVFFVAVYFLGIIT 455

Query: 218  YGIAIPSGLFIPVILAGASYGRLVGSVLGPFTVLDTGLFXXXXXXXXXXXXXXXXXXXXX 397
            YGIAIPSGLFIPVILAGASYGRLVG +LGP + LD  LF                     
Sbjct: 456  YGIAIPSGLFIPVILAGASYGRLVGKLLGPISDLDVSLFSLLGAASFL------------ 503

Query: 398  XXXXXXXXXXXXXXXXGGTMRMTVSICIIXXXXXXXXXXXXXXXXXXXISKTVADCFNKG 577
                            GGTMRMTVS+CII                   ISKTVAD FNKG
Sbjct: 504  ----------------GGTMRMTVSLCIILLELTNDLLMLPLMMLVLLISKTVADSFNKG 547

Query: 578  VYDQIVEIKGLPYMEAHAEPYMRHLVASDVVSGPLFTFSGVEKVGNIVYALKTTGHHGFP 757
            VYDQIV++KGLPYMEAHAEPYMR LVASDVVSGPL +FSGVEKVGNI++ALKTTGH+GFP
Sbjct: 548  VYDQIVKMKGLPYMEAHAEPYMRQLVASDVVSGPLVSFSGVEKVGNILHALKTTGHNGFP 607

Query: 758  VIDDPPFSDAPQXXXXXXXXXXXXXXQHRTFTAHKVMTGP---TIFKAFDFAKPGLGRGI 928
            VID+PPFSDA +              + + FT  ++M+G    TIFKA DFAK G G+GI
Sbjct: 608  VIDEPPFSDASELCGLVLRSHLLVLLKGKKFTKLRIMSGSGILTIFKAHDFAKAGSGKGI 667

Query: 929  KLEDLDISEDEMEMFVDLRPITNTSPYTVVETMSLAKAAXXXXXXXXXXXXVVPNTLGRP 1108
            KLEDLDI+ +EM+M+VDL PITNTSPYTVVE+MSLAKAA            VVP T GRP
Sbjct: 668  KLEDLDITAEEMDMYVDLHPITNTSPYTVVESMSLAKAAVLFRELGLRHLCVVPKTPGRP 727

Query: 1109 PIVGILTRHDFMPRHVLGLFPHLKPRK 1189
            PIVGILTRHDF+P H+LGL+PH+ P K
Sbjct: 728  PIVGILTRHDFVPEHILGLYPHINPHK 754


>ref|XP_002331119.1| Cl-channel clc-7 [Populus trichocarpa] gi|222872847|gb|EEF09978.1|
            Cl-channel clc-7 [Populus trichocarpa]
          Length = 743

 Score =  427 bits (1098), Expect = e-117
 Identities = 224/387 (57%), Positives = 261/387 (67%), Gaps = 3/387 (0%)
 Frame = +2

Query: 38   YNSFQCPANHYNDLTSLFFTTNDDAIRNLFIAGSADNKGSFRISSLVIFFVAIYLLGIVT 217
            + +FQCP NHYNDL SL F TNDDAIRNLF +GS   +  F +S+L++FF AIY LGIVT
Sbjct: 388  FKNFQCPPNHYNDLASLVFNTNDDAIRNLFTSGS---EKEFHLSTLIVFFFAIYCLGIVT 444

Query: 218  YGIAIPSGLFIPVILAGASYGRLVGSVLGPFTVLDTGLFXXXXXXXXXXXXXXXXXXXXX 397
            YGIA+PSGLFIPVILAGASYGRL+G++LGP + LD GL                      
Sbjct: 445  YGIAVPSGLFIPVILAGASYGRLIGTMLGPLSNLDAGL---------------------- 482

Query: 398  XXXXXXXXXXXXXXXXGGTMRMTVSICIIXXXXXXXXXXXXXXXXXXXISKTVADCFNKG 577
                            GGTMRMTVS+C+I                   ISKTVAD FNKG
Sbjct: 483  ------CALLGAASFLGGTMRMTVSLCVILLELTNDLLMLPLIMLVLLISKTVADSFNKG 536

Query: 578  VYDQIVEIKGLPYMEAHAEPYMRHLVASDVVSGPLFTFSGVEKVGNIVYALKTTGHHGFP 757
            +YDQ+V +KG PYMEAHAEPYMRHLVASDVVSGPL +FSG+EKVGN++ ALK TGH+GFP
Sbjct: 537  IYDQMVRMKGFPYMEAHAEPYMRHLVASDVVSGPLVSFSGIEKVGNLLLALKVTGHNGFP 596

Query: 758  VIDDPPFSDAPQXXXXXXXXXXXXXXQHRTFTAHKVMTGPTI---FKAFDFAKPGLGRGI 928
            VID+PP SDAP+              + + FT  +V TG  I   FKA DFAK G G+G+
Sbjct: 597  VIDEPPCSDAPELCGLVLRSHLLVLLRGKKFTKQRVKTGSGIMKSFKAHDFAKAGSGKGV 656

Query: 929  KLEDLDISEDEMEMFVDLRPITNTSPYTVVETMSLAKAAXXXXXXXXXXXXVVPNTLGRP 1108
            KLEDL+I+E+EMEM+VDL PITNTSPYTVVETMSLAKAA            VVP T GRP
Sbjct: 657  KLEDLEITEEEMEMYVDLHPITNTSPYTVVETMSLAKAAVLFRELGLRHLCVVPKTPGRP 716

Query: 1109 PIVGILTRHDFMPRHVLGLFPHLKPRK 1189
            PIVGILTRHDF P H+LGL+PH+KP K
Sbjct: 717  PIVGILTRHDFTPDHILGLYPHIKPHK 743


>gb|ADF30876.1| chloride channel protein [Citrus trifoliata]
          Length = 789

 Score =  422 bits (1084), Expect = e-115
 Identities = 225/386 (58%), Positives = 260/386 (67%), Gaps = 3/386 (0%)
 Frame = +2

Query: 38   YNSFQCPANHYNDLTSLFFTTNDDAIRNLFIAGSADNKGSFRISSLVIFFVAIYLLGIVT 217
            Y +FQCPA HYNDL SLF  TNDDAIRNLF +G++     F +S+L++FFVAIY LGI+T
Sbjct: 433  YKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKE---FHLSTLLVFFVAIYCLGIIT 489

Query: 218  YGIAIPSGLFIPVILAGASYGRLVGSVLGPFTVLDTGLFXXXXXXXXXXXXXXXXXXXXX 397
            YGIA+PSGLFIPVILAGASYGRLVG++LG  + LD GLF                     
Sbjct: 490  YGIAVPSGLFIPVILAGASYGRLVGNLLGALSGLDAGLFALLGAASFL------------ 537

Query: 398  XXXXXXXXXXXXXXXXGGTMRMTVSICIIXXXXXXXXXXXXXXXXXXXISKTVADCFNKG 577
                            GGTMRMTVS+C+I                   ISKTVAD FN+G
Sbjct: 538  ----------------GGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQG 581

Query: 578  VYDQIVEIKGLPYMEAHAEPYMRHLVASDVVSGPLFTFSGVEKVGNIVYALKTTGHHGFP 757
            VYDQIV++KGLPY+EAHAEPYM++LVASDVVSGPL TFSGVEKVGNI++AL+ T H+GFP
Sbjct: 582  VYDQIVKLKGLPYLEAHAEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFP 641

Query: 758  VIDDPPFSDAPQXXXXXXXXXXXXXXQHRTFTAHKVMTGPTI---FKAFDFAKPGLGRGI 928
            VID+PP + AP+              + + FT  K M G  I   FKA DFAK G G+G+
Sbjct: 642  VIDEPPLTPAPELCGLVLRSHLLVLLKGKKFTKQKTMAGSDIMRRFKAHDFAKAGSGKGV 701

Query: 929  KLEDLDISEDEMEMFVDLRPITNTSPYTVVETMSLAKAAXXXXXXXXXXXXVVPNTLGRP 1108
            KLEDLDI E+EMEMFVDL PITNTSPYTVVETMSLAKAA            VVP T GRP
Sbjct: 702  KLEDLDIEEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRP 761

Query: 1109 PIVGILTRHDFMPRHVLGLFPHLKPR 1186
            PIVGILTRHDFMP HVLGL+PH+  R
Sbjct: 762  PIVGILTRHDFMPEHVLGLYPHVVNR 787


>emb|CBI29647.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  421 bits (1082), Expect = e-115
 Identities = 222/387 (57%), Positives = 254/387 (65%), Gaps = 3/387 (0%)
 Frame = +2

Query: 38   YNSFQCPANHYNDLTSLFFTTNDDAIRNLFIAGSADNKGSFRISSLVIFFVAIYLLGIVT 217
            Y +FQC   HYNDL SLF  TNDDAIRNLF  G+   +  F++S+LVIFF A+Y LGI+T
Sbjct: 387  YKNFQCQPGHYNDLASLFLNTNDDAIRNLFSNGT---QNEFQLSTLVIFFAAVYCLGIIT 443

Query: 218  YGIAIPSGLFIPVILAGASYGRLVGSVLGPFTVLDTGLFXXXXXXXXXXXXXXXXXXXXX 397
            YGIA+PSGLFIPVILAGASYGR+VG+V G  T LD GLF                     
Sbjct: 444  YGIAVPSGLFIPVILAGASYGRIVGTVAGSLTSLDVGLFSLLGAASFL------------ 491

Query: 398  XXXXXXXXXXXXXXXXGGTMRMTVSICIIXXXXXXXXXXXXXXXXXXXISKTVADCFNKG 577
                            GGTMRMTVS+CII                   ISKTVADCFNKG
Sbjct: 492  ----------------GGTMRMTVSLCIILLELTNDLLMLPLMMLVLLISKTVADCFNKG 535

Query: 578  VYDQIVEIKGLPYMEAHAEPYMRHLVASDVVSGPLFTFSGVEKVGNIVYALKTTGHHGFP 757
            VYDQIV +KG PYMEAHAEPYMRHLVA DVVSGPL TFS +EKVGNI++ALKTTGHHGFP
Sbjct: 536  VYDQIVRMKGFPYMEAHAEPYMRHLVAKDVVSGPLITFSSIEKVGNILHALKTTGHHGFP 595

Query: 758  VIDDPPFSDAPQXXXXXXXXXXXXXXQHRTFTAHKVMTGPTIFKAF---DFAKPGLGRGI 928
            VID+PPF+DAP+              + + F+  +++ G  I K F   DFAK G G+G+
Sbjct: 596  VIDEPPFTDAPELCGLVLKSHLLVLLKGKKFSKTRMLVGSEILKTFEANDFAKAGSGKGV 655

Query: 929  KLEDLDISEDEMEMFVDLRPITNTSPYTVVETMSLAKAAXXXXXXXXXXXXVVPNTLGRP 1108
            KLEDLDI+ +EMEM+VDL PITNTSPYTVVETMSLAKAA            VVP T  RP
Sbjct: 656  KLEDLDITAEEMEMYVDLHPITNTSPYTVVETMSLAKAAVLFRELGLRHLCVVPKTHARP 715

Query: 1109 PIVGILTRHDFMPRHVLGLFPHLKPRK 1189
            PIVGILTRHDFMP H+ GL+PH    K
Sbjct: 716  PIVGILTRHDFMPGHIRGLYPHFNSSK 742


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