BLASTX nr result

ID: Glycyrrhiza24_contig00005268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005268
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597606.1| WD-40 repeat-containing protein MSI4 [Medica...   100   2e-19
ref|XP_003543596.1| PREDICTED: WD-40 repeat-containing protein M...   100   2e-19
gb|AFK39711.1| unknown [Lotus japonicus]                               97   2e-18
ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein M...    97   2e-18
ref|XP_003533753.1| PREDICTED: WD-40 repeat-containing protein M...    97   2e-18

>ref|XP_003597606.1| WD-40 repeat-containing protein MSI4 [Medicago truncatula]
           gi|124360382|gb|ABN08395.1| WD40-like [Medicago
           truncatula] gi|355486654|gb|AES67857.1| WD-40
           repeat-containing protein MSI4 [Medicago truncatula]
          Length = 479

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/51 (84%), Positives = 49/51 (96%)
 Frame = -2

Query: 387 PWTIVSVSDDCESTGGGGTLQIWRMIDLVYRPEEEVLAELDKFRSQIVGCD 235
           PWTIVSVSDDC STGGGGTLQIWRM+DL+YRPE+EV+AELDKF+S I+GCD
Sbjct: 414 PWTIVSVSDDCASTGGGGTLQIWRMMDLIYRPEDEVMAELDKFKSHILGCD 464


>ref|XP_003543596.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max]
          Length = 453

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -2

Query: 387 PWTIVSVSDDCESTGGGGTLQIWRMIDLVYRPEEEVLAELDKFRSQIVGCD 235
           PWTIVSVSDDCES+GGGGTLQIWRM+DL+YRPEEEVL ELDKFRS I GC+
Sbjct: 402 PWTIVSVSDDCESSGGGGTLQIWRMMDLIYRPEEEVLTELDKFRSHIFGCN 452


>gb|AFK39711.1| unknown [Lotus japonicus]
          Length = 283

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = -2

Query: 387 PWTIVSVSDDCESTGGGGTLQIWRMIDLVYRPEEEVLAELDKFRSQIVGC 238
           PWTIVSVSDDCESTGGGGTLQIWRM DL+YRPEEEVLAEL+KF++ +V C
Sbjct: 228 PWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKAHVVAC 277


>ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max]
          Length = 508

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = -2

Query: 387 PWTIVSVSDDCESTGGGGTLQIWRMIDLVYRPEEEVLAELDKFRSQIVGC 238
           PWTIVSVSDDCESTGGGGTLQIWRM DL+YRPE+EVLAEL+KF+S +V C
Sbjct: 453 PWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVVAC 502


>ref|XP_003533753.1| PREDICTED: WD-40 repeat-containing protein MSI4-like isoform 2
           [Glycine max]
          Length = 504

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = -2

Query: 387 PWTIVSVSDDCESTGGGGTLQIWRMIDLVYRPEEEVLAELDKFRSQIVGC 238
           PWTIVSVSDDCESTGGGGTLQIWRM DL+YRPE+EVLAEL+KF+S +V C
Sbjct: 449 PWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVVAC 498


Top