BLASTX nr result

ID: Glycyrrhiza24_contig00005236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005236
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235488.1| uncharacterized protein LOC100527396 [Glycin...   305   2e-80
ref|XP_003539866.1| PREDICTED: uncharacterized protein LOC100499...   302   1e-79
ref|XP_003605920.1| Succinate dehydrogenase subunit [Medicago tr...   297   3e-78
gb|AFK40337.1| unknown [Lotus japonicus]                              264   3e-68
gb|AAK73693.1|AF362740_1 succinate dehydrogenase subunit 3 [Glyc...   250   5e-64

>ref|NP_001235488.1| uncharacterized protein LOC100527396 [Glycine max]
            gi|255632256|gb|ACU16486.1| unknown [Glycine max]
          Length = 244

 Score =  305 bits (780), Expect = 2e-80
 Identities = 167/227 (73%), Positives = 184/227 (81%), Gaps = 7/227 (3%)
 Frame = -1

Query: 1025 AALHRTSP----PQIGA---LPQLFHRTTTPTAPSAGENPSREYMTGLPKDPANKLAGDS 867
            ++L RT P    PQIGA   LP LFHR T  T P A EN S   +TGLPK PANKL  DS
Sbjct: 19   SSLSRTFPSLPRPQIGAISPLPDLFHRNTA-TMPFAKENASGGNLTGLPKVPANKLGSDS 77

Query: 866  NAINSLGYKALGLDTNVLAGARYGSSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGP 687
            +A NS  YKA GL+TNVLAGARY S V AA+  M LGVN VMARSFER + A TLG+IG 
Sbjct: 78   DATNSSRYKASGLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGH 137

Query: 686  RRFMSDIPSKTSETNPSGFRPLSPHLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYM 507
            + FMSDIPSKTSETNPSGFRPLSPHLPLYQPQ+SSTLSIFNRIAGA LA VIL+FYMIYM
Sbjct: 138  KCFMSDIPSKTSETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYM 197

Query: 506  KMGLISLTYDSFYQFMFYSSKLNLLAVEISALFMSYHLYSAIRHLFV 366
            K+GL+SLTYDSFYQF+FYSSKLNLL +EISAL +SYHLYSAIRHLF+
Sbjct: 198  KLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 244


>ref|XP_003539866.1| PREDICTED: uncharacterized protein LOC100499683 [Glycine max]
            gi|255625753|gb|ACU13221.1| unknown [Glycine max]
          Length = 249

 Score =  302 bits (773), Expect = 1e-79
 Identities = 167/226 (73%), Positives = 181/226 (80%), Gaps = 7/226 (3%)
 Frame = -1

Query: 1022 ALHRTSP----PQIGA---LPQLFHRTTTPTAPSAGENPSREYMTGLPKDPANKLAGDSN 864
            +L R+ P    PQIGA   LP LFHR T  T P A EN S   + GLPK PAN L  DSN
Sbjct: 25   SLSRSGPTLDLPQIGAISPLPDLFHRNTA-TMPFAKENASGGNLAGLPKVPANTLGSDSN 83

Query: 863  AINSLGYKALGLDTNVLAGARYGSSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGPR 684
            AINS  YKA GLDTNVLAGAR  S V AA+ PM L VN VMARSFER + A TLG+IG +
Sbjct: 84   AINSPRYKASGLDTNVLAGARCVSGVWAAQGPMRLVVNTVMARSFERSMEAGTLGMIGHK 143

Query: 683  RFMSDIPSKTSETNPSGFRPLSPHLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYMK 504
            RFMSDIPSKTSETN SGFRPLSPHLPLYQPQ+SSTLSIFNRIAGA LA VILLFYMIYMK
Sbjct: 144  RFMSDIPSKTSETNLSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMK 203

Query: 503  MGLISLTYDSFYQFMFYSSKLNLLAVEISALFMSYHLYSAIRHLFV 366
            +GL+SLTYDSFYQF+FYSSKLNLL +EISAL +SYHLYSAIRHLF+
Sbjct: 204  LGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 249


>ref|XP_003605920.1| Succinate dehydrogenase subunit [Medicago truncatula]
           gi|355506975|gb|AES88117.1| Succinate dehydrogenase
           subunit [Medicago truncatula]
           gi|388502196|gb|AFK39164.1| unknown [Medicago
           truncatula]
          Length = 245

 Score =  297 bits (761), Expect = 3e-78
 Identities = 151/203 (74%), Positives = 172/203 (84%)
 Frame = -1

Query: 974 FHRTTTPTAPSAGENPSREYMTGLPKDPANKLAGDSNAINSLGYKALGLDTNVLAGARYG 795
           FHRTTT T P A +N ++ + +GLP +  NKLAG +N  NSL Y+ALGLDTNVLAGARYG
Sbjct: 44  FHRTTT-TLPYADQNSTKGHFSGLPNNLENKLAGHANQFNSLRYQALGLDTNVLAGARYG 102

Query: 794 SSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGPRRFMSDIPSKTSETNPSGFRPLSP 615
           + VS  K PMLLG+N +MAR+ ERGVGADTLGL G RRFMSDIPSKTSE   SGFRPLSP
Sbjct: 103 TQVSGTKSPMLLGLNTLMARNIERGVGADTLGLAGHRRFMSDIPSKTSEAKQSGFRPLSP 162

Query: 614 HLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYMKMGLISLTYDSFYQFMFYSSKLNL 435
           HLP+YQPQ+SSTLSI NRIAGA LAAV LLFYMIYMK+GL+ LT+D FYQF+FYSSKL+L
Sbjct: 163 HLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKVGLVGLTFDPFYQFVFYSSKLHL 222

Query: 434 LAVEISALFMSYHLYSAIRHLFV 366
           LA+EISAL MSYHLYSAIRHLF+
Sbjct: 223 LAIEISALAMSYHLYSAIRHLFI 245


>gb|AFK40337.1| unknown [Lotus japonicus]
          Length = 219

 Score =  264 bits (675), Expect = 3e-68
 Identities = 142/220 (64%), Positives = 164/220 (74%)
 Frame = -1

Query: 1025 AALHRTSPPQIGALPQLFHRTTTPTAPSAGENPSREYMTGLPKDPANKLAGDSNAINSLG 846
            ++LHRT+PPQIGA           T  + GEN SR  +TGLPKD        SN  +SL 
Sbjct: 22   SSLHRTAPPQIGA-----------TTATGGENTSRGNLTGLPKD--------SNDFSSLR 62

Query: 845  YKALGLDTNVLAGARYGSSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGPRRFMSDI 666
            + A GLD  +LAGARYG+   AA  PM +GV   MARSF+RG G + LGL   +RFMSD 
Sbjct: 63   FNAYGLDATLLAGARYGTKACAANGPMQMGV---MARSFQRGAGPEPLGLTSHKRFMSDT 119

Query: 665  PSKTSETNPSGFRPLSPHLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYMKMGLISL 486
             SKT+ET P G RPLSPHLP+YQPQ+SSTLSIFNRIAGA+LAA+I+ FYMIYMKMGLISL
Sbjct: 120  SSKTTETKPYGLRPLSPHLPVYQPQLSSTLSIFNRIAGASLAAIIVAFYMIYMKMGLISL 179

Query: 485  TYDSFYQFMFYSSKLNLLAVEISALFMSYHLYSAIRHLFV 366
            TYDSFYQF+FYSSKLNLLA+EISAL  +YHLYSAIRHL V
Sbjct: 180  TYDSFYQFVFYSSKLNLLAIEISALATTYHLYSAIRHLLV 219


>gb|AAK73693.1|AF362740_1 succinate dehydrogenase subunit 3 [Glycine max]
          Length = 157

 Score =  250 bits (639), Expect = 5e-64
 Identities = 128/156 (82%), Positives = 141/156 (90%)
 Frame = -1

Query: 833 GLDTNVLAGARYGSSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGPRRFMSDIPSKT 654
           GL+TNVLAGARY S V AA+  M LGVN VMARSFER + A TLG+IG +RFMSDIPSKT
Sbjct: 2   GLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKT 61

Query: 653 SETNPSGFRPLSPHLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYMKMGLISLTYDS 474
           SETNPSGFRPLSPHLPLYQPQ+SSTLSIFNRIAGA LA VIL+FYMIYMK+GL+SLTYDS
Sbjct: 62  SETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDS 121

Query: 473 FYQFMFYSSKLNLLAVEISALFMSYHLYSAIRHLFV 366
           FYQF+FYSSKLNLL +EISAL +SYHLYSAIRHLF+
Sbjct: 122 FYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 157


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