BLASTX nr result

ID: Glycyrrhiza24_contig00005234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005234
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238529.1| uncharacterized protein LOC100527857 precurs...   123   4e-35
gb|AFK47308.1| unknown [Lotus japonicus]                              124   1e-33
ref|XP_003603289.1| Early nodulin-like protein [Medicago truncat...   122   5e-33
ref|NP_001236667.1| uncharacterized protein LOC100305787 precurs...   116   1e-32
gb|ABI96983.1| phytocyanin-like arabinogalactan-protein [Gossypi...   123   2e-32

>ref|NP_001238529.1| uncharacterized protein LOC100527857 precursor [Glycine max]
           gi|255633386|gb|ACU17050.1| unknown [Glycine max]
          Length = 190

 Score =  123 bits (308), Expect(2) = 4e-35
 Identities = 53/64 (82%), Positives = 63/64 (98%)
 Frame = +1

Query: 88  KEVLVGGKTDAWKIPSSESDSLNKWAERARFQVGDHLVWKYDGGKDSVLQVSKEDYGNCN 267
           KE+LVGGKTDAW++P+SESDSLN+WAE++RFQVGD+LVWKYDGGKDSVLQVS+EDYGNC+
Sbjct: 28  KEMLVGGKTDAWRVPASESDSLNQWAEKSRFQVGDYLVWKYDGGKDSVLQVSREDYGNCS 87

Query: 268 SSNP 279
            SNP
Sbjct: 88  ISNP 91



 Score = 52.4 bits (124), Expect(2) = 4e-35
 Identities = 23/31 (74%), Positives = 29/31 (93%)
 Frame = +2

Query: 398 FISGAKGHCEKGQKVIVVVMSPRGGGSRYTG 490
           FISGA+GHCEKGQK++VVV++PRGG  R+TG
Sbjct: 112 FISGARGHCEKGQKLVVVVLTPRGG--RFTG 140


>gb|AFK47308.1| unknown [Lotus japonicus]
          Length = 174

 Score =  124 bits (310), Expect(2) = 1e-33
 Identities = 53/64 (82%), Positives = 64/64 (100%)
 Frame = +1

Query: 88  KEVLVGGKTDAWKIPSSESDSLNKWAERARFQVGDHLVWKYDGGKDSVLQVSKEDYGNCN 267
           KE+LVGGKTDAWK+PSSE+DSLN+WAE++RF+VGD+LVWKYDGGKDSVLQV+KEDYG+CN
Sbjct: 21  KELLVGGKTDAWKVPSSEADSLNQWAEKSRFKVGDYLVWKYDGGKDSVLQVNKEDYGSCN 80

Query: 268 SSNP 279
           +SNP
Sbjct: 81  TSNP 84



 Score = 47.0 bits (110), Expect(2) = 1e-33
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +2

Query: 398 FISGAKGHCEKGQKVIVVVMSPRGGGSR 481
           FISGAKGHCEKGQK++VVVM+P+    R
Sbjct: 105 FISGAKGHCEKGQKLVVVVMTPKHSRDR 132


>ref|XP_003603289.1| Early nodulin-like protein [Medicago truncatula]
           gi|355492337|gb|AES73540.1| Early nodulin-like protein
           [Medicago truncatula]
          Length = 180

 Score =  122 bits (305), Expect(2) = 5e-33
 Identities = 53/64 (82%), Positives = 61/64 (95%)
 Frame = +1

Query: 88  KEVLVGGKTDAWKIPSSESDSLNKWAERARFQVGDHLVWKYDGGKDSVLQVSKEDYGNCN 267
           KE+LVGGK DAWK+PSSE+DSLN+WAE++RF+V DHLVWKYDGGKDSVLQV+KEDY NCN
Sbjct: 25  KELLVGGKIDAWKVPSSETDSLNQWAEKSRFKVDDHLVWKYDGGKDSVLQVNKEDYANCN 84

Query: 268 SSNP 279
           SSNP
Sbjct: 85  SSNP 88



 Score = 46.6 bits (109), Expect(2) = 5e-33
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +2

Query: 398 FISGAKGHCEKGQKVIVVVMSPR 466
           FISGAKGHCE+GQK+IVVVMSP+
Sbjct: 109 FISGAKGHCEQGQKLIVVVMSPK 131


>ref|NP_001236667.1| uncharacterized protein LOC100305787 precursor [Glycine max]
           gi|255626605|gb|ACU13647.1| unknown [Glycine max]
          Length = 187

 Score =  116 bits (290), Expect(2) = 1e-32
 Identities = 51/64 (79%), Positives = 61/64 (95%)
 Frame = +1

Query: 88  KEVLVGGKTDAWKIPSSESDSLNKWAERARFQVGDHLVWKYDGGKDSVLQVSKEDYGNCN 267
           KE+LVGGKTDAWK+ +SESDSLN+WAE++RFQVGD+LVWKYDGGKDSVL+VSKE+Y NC+
Sbjct: 23  KEILVGGKTDAWKVSASESDSLNQWAEKSRFQVGDYLVWKYDGGKDSVLRVSKENYVNCS 82

Query: 268 SSNP 279
            SNP
Sbjct: 83  ISNP 86



 Score = 51.2 bits (121), Expect(2) = 1e-32
 Identities = 23/31 (74%), Positives = 29/31 (93%)
 Frame = +2

Query: 398 FISGAKGHCEKGQKVIVVVMSPRGGGSRYTG 490
           FISGAKGHCEKGQK++VVV++PR  G+R+TG
Sbjct: 107 FISGAKGHCEKGQKLVVVVLTPR-RGTRFTG 136


>gb|ABI96983.1| phytocyanin-like arabinogalactan-protein [Gossypium hirsutum]
           gi|115393870|gb|ABI96984.1| phytocyanin-like
           arabinogalactan-protein [Gossypium hirsutum]
          Length = 175

 Score =  123 bits (309), Expect(2) = 2e-32
 Identities = 55/64 (85%), Positives = 61/64 (95%)
 Frame = +1

Query: 88  KEVLVGGKTDAWKIPSSESDSLNKWAERARFQVGDHLVWKYDGGKDSVLQVSKEDYGNCN 267
           KE++VGGKT AWKIPSSESDSLNKWAE+ARFQ+GD LVWKYDGGKDSVLQVSKEDY +CN
Sbjct: 26  KEIMVGGKTGAWKIPSSESDSLNKWAEKARFQIGDSLVWKYDGGKDSVLQVSKEDYTSCN 85

Query: 268 SSNP 279
           +SNP
Sbjct: 86  TSNP 89



 Score = 43.1 bits (100), Expect(2) = 2e-32
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +2

Query: 398 FISGAKGHCEKGQKVIVVVMSPRGGGSRYTG 490
           F+SGAKGHCE+GQK+IVVVMS +    RY G
Sbjct: 110 FMSGAKGHCEQGQKMIVVVMSQK---HRYIG 137


Top