BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005197
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containi...   217   9e-55
ref|XP_003593032.1| Pentatricopeptide repeat-containing protein ...   217   9e-55
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   182   2e-44
ref|NP_172560.2| pentatricopeptide repeat-containing protein [Ar...   179   2e-43

>ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  217 bits (552), Expect = 9e-55
 Identities = 107/121 (88%), Positives = 113/121 (93%)
 Frame = +3

Query: 3   SSLIYHLGQSNAYPEAFSVYNMLKYSKRTMCKALHEKILHILLAGKLLKDAYVVLKDNAT 182
           SSLI HLGQ NAY EAFSVYNMLKYSKRTMCK+LHEKILHILLAG+LLKDAYVV+KDNA 
Sbjct: 460 SSLISHLGQVNAYSEAFSVYNMLKYSKRTMCKSLHEKILHILLAGQLLKDAYVVVKDNAK 519

Query: 183 FISRPTTKKFASAFMKSGNINLINDVLKTLHNCGYKIDQDLFEMAVSRYLGQPEKKDLLL 362
           FISRP TKKFASAFMKSGN+N INDVLKTLH+CGYK+DQDLF MAVSRYL QPEKKDLLL
Sbjct: 520 FISRPATKKFASAFMKSGNLNYINDVLKTLHDCGYKLDQDLFAMAVSRYLDQPEKKDLLL 579

Query: 363 H 365
           H
Sbjct: 580 H 580


>ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482080|gb|AES63283.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 627

 Score =  217 bits (552), Expect = 9e-55
 Identities = 109/121 (90%), Positives = 113/121 (93%)
 Frame = +3

Query: 3   SSLIYHLGQSNAYPEAFSVYNMLKYSKRTMCKALHEKILHILLAGKLLKDAYVVLKDNAT 182
           SSLIYHLGQ NA  EAFS+YNML+YSKRT+ KALHEKILHILLAGKLLKDAYVV KDNAT
Sbjct: 458 SSLIYHLGQENASSEAFSLYNMLRYSKRTIGKALHEKILHILLAGKLLKDAYVVFKDNAT 517

Query: 183 FISRPTTKKFASAFMKSGNINLINDVLKTLHNCGYKIDQDLFEMAVSRYLGQPEKKDLLL 362
            IS PTTKKFASAFMKSGNINLINDV+KTLHNCGYKIDQ LFEMAVSRYLGQPEKKDLLL
Sbjct: 518 SISGPTTKKFASAFMKSGNINLINDVMKTLHNCGYKIDQGLFEMAVSRYLGQPEKKDLLL 577

Query: 363 H 365
           H
Sbjct: 578 H 578


>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  189 bits (479), Expect = 3e-46
 Identities = 89/121 (73%), Positives = 108/121 (89%)
 Frame = +3

Query: 3   SSLIYHLGQSNAYPEAFSVYNMLKYSKRTMCKALHEKILHILLAGKLLKDAYVVLKDNAT 182
           SSLI HLG+  A+ +AFSVYNML+YSKRTMCKALHEKILHIL+AG+LLKDAYVV+KDN  
Sbjct: 490 SSLISHLGKIRAHSQAFSVYNMLRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNEG 549

Query: 183 FISRPTTKKFASAFMKSGNINLINDVLKTLHNCGYKIDQDLFEMAVSRYLGQPEKKDLLL 362
            IS+P+ KKFA+AFMK GN+NLINDV+K +H  GYKIDQ+LF+MAV+RY+ +PEKK+LLL
Sbjct: 550 LISKPSIKKFATAFMKFGNVNLINDVMKAIHGSGYKIDQELFQMAVTRYIAEPEKKELLL 609

Query: 363 H 365
           H
Sbjct: 610 H 610


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/122 (72%), Positives = 105/122 (86%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   SSLIYHLGQSNAYPEAFSVYNMLKYSKRTMCKALHEKILHILLAGKLLKDAYVVLKDNAT 182
           S LI+HLG++ AY EAFSVY MLKY KRTMCKALHEKILH+LL G+LLKDAYVV+KDNA 
Sbjct: 501 SMLIFHLGKAKAYTEAFSVYTMLKYGKRTMCKALHEKILHVLLGGQLLKDAYVVVKDNAE 560

Query: 183 FISRPTTKKFASAFMKSGNINLINDVLKTLHNCGYKIDQ--DLFEMAVSRYLGQPEKKDL 356
            IS+   KKFA+AFMK GNINLINDV+K +H+ GYKIDQ  +LF+MA+SRY+ QPEKKDL
Sbjct: 561 LISQAAIKKFANAFMKLGNINLINDVMKVIHSSGYKIDQASELFQMAISRYIAQPEKKDL 620

Query: 357 LL 362
           L+
Sbjct: 621 LV 622


>ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g10910, chloroplastic; Flags: Precursor
           gi|110741600|dbj|BAE98748.1| membrane-associated
           salt-inducible protein isolog [Arabidopsis thaliana]
           gi|332190541|gb|AEE28662.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 664

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/120 (72%), Positives = 101/120 (84%)
 Frame = +3

Query: 3   SSLIYHLGQSNAYPEAFSVYNMLKYSKRTMCKALHEKILHILLAGKLLKDAYVVLKDNAT 182
           SSLIYHLG+  A  EAFSVYNML+YSKRT+CK LHEKILHIL+ G LLKDAY+V+KDNA 
Sbjct: 486 SSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVKDNAK 545

Query: 183 FISRPTTKKFASAFMKSGNINLINDVLKTLHNCGYKIDQDLFEMAVSRYLGQPEKKDLLL 362
            IS+PT KKF  AFM SGNINL+NDVLK LH  G+KIDQ  FE+A+SRY+ QP+KK+LLL
Sbjct: 546 MISQPTLKKFGRAFMISGNINLVNDVLKVLHGSGHKIDQVQFEIAISRYISQPDKKELLL 605