BLASTX nr result

ID: Glycyrrhiza24_contig00005177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005177
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor ...    55   6e-06
ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor ...    55   6e-06
gb|ACU19502.1| unknown [Glycine max]                                   55   6e-06

>ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|222849348|gb|EEE86895.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 388 QQKPKARGWMYQIASPEDLMLQLFSLPRRR 477
           Q KPKARGWMY++ASPEDLMLQLFSL R+R
Sbjct: 422 QVKPKARGWMYRLASPEDLMLQLFSLQRQR 451


>ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 1
           [Glycine max]
          Length = 489

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +1

Query: 385 VQQKPKARGWMYQIASPEDLMLQLFSLPRRRIR 483
           ++QKPKA+GWMY+IA PEDLM QL SLPRRR+R
Sbjct: 413 IEQKPKAKGWMYRIAYPEDLM-QLISLPRRRVR 444


>ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 497

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +1

Query: 385 VQQKPKARGWMYQIASPEDLMLQLFSLPRRRIR 483
           ++QKPKA+GWMY+IA PEDLM QL SLPRRR+R
Sbjct: 421 IEQKPKAKGWMYRIAYPEDLM-QLISLPRRRVR 452


>gb|ACU19502.1| unknown [Glycine max]
          Length = 489

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +1

Query: 385 VQQKPKARGWMYQIASPEDLMLQLFSLPRRRIR 483
           ++QKPKA+GWMY+IA PEDLM QL SLPRRR+R
Sbjct: 413 IEQKPKAKGWMYRIAYPEDLM-QLISLPRRRVR 444


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