BLASTX nr result
ID: Glycyrrhiza24_contig00005177
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00005177 (485 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor ... 55 6e-06 ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor ... 55 6e-06 gb|ACU19502.1| unknown [Glycine max] 55 6e-06 >ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|222849348|gb|EEE86895.1| predicted protein [Populus trichocarpa] Length = 496 Score = 55.8 bits (133), Expect = 3e-06 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = +1 Query: 388 QQKPKARGWMYQIASPEDLMLQLFSLPRRR 477 Q KPKARGWMY++ASPEDLMLQLFSL R+R Sbjct: 422 QVKPKARGWMYRLASPEDLMLQLFSLQRQR 451 >ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 1 [Glycine max] Length = 489 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/33 (75%), Positives = 30/33 (90%) Frame = +1 Query: 385 VQQKPKARGWMYQIASPEDLMLQLFSLPRRRIR 483 ++QKPKA+GWMY+IA PEDLM QL SLPRRR+R Sbjct: 413 IEQKPKAKGWMYRIAYPEDLM-QLISLPRRRVR 444 >ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max] Length = 497 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/33 (75%), Positives = 30/33 (90%) Frame = +1 Query: 385 VQQKPKARGWMYQIASPEDLMLQLFSLPRRRIR 483 ++QKPKA+GWMY+IA PEDLM QL SLPRRR+R Sbjct: 421 IEQKPKAKGWMYRIAYPEDLM-QLISLPRRRVR 452 >gb|ACU19502.1| unknown [Glycine max] Length = 489 Score = 55.1 bits (131), Expect = 6e-06 Identities = 25/33 (75%), Positives = 30/33 (90%) Frame = +1 Query: 385 VQQKPKARGWMYQIASPEDLMLQLFSLPRRRIR 483 ++QKPKA+GWMY+IA PEDLM QL SLPRRR+R Sbjct: 413 IEQKPKAKGWMYRIAYPEDLM-QLISLPRRRVR 444