BLASTX nr result

ID: Glycyrrhiza24_contig00005174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005174
         (1936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796...   409   e-111
ref|XP_003525100.1| PREDICTED: uncharacterized protein LOC100820...   396   e-107
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   358   2e-96
ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804...   353   9e-95
ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790...   352   3e-94

>ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796457 [Glycine max]
          Length = 314

 Score =  409 bits (1051), Expect = e-111
 Identities = 220/317 (69%), Positives = 237/317 (74%), Gaps = 1/317 (0%)
 Frame = +2

Query: 536  RSILESAGVDVWVLMDAAIAVASVDHGNELKRRRDGIVERLYTAAALPR-CRNCDEVNNG 712
            RSILESAGVDVW LMDAAIAVAS DH +ELKRRRDGIVERLY A++ P  CRNCD  + G
Sbjct: 7    RSILESAGVDVWALMDAAIAVASADHAHELKRRRDGIVERLYAASSPPPLCRNCDAGDGG 66

Query: 713  EIEKKQQQSSPLTEEEKDPYGGLFDDEQKKILEIKEQLEDPHQSEDSLVELLQNLDDMDI 892
            EI   + QSSP  EEEKDPYGGLFDDEQ+KIL+IKEQLEDPHQSEDSLVELLQNL DMDI
Sbjct: 67   EI---RTQSSPSAEEEKDPYGGLFDDEQRKILDIKEQLEDPHQSEDSLVELLQNLADMDI 123

Query: 893  TFQALEETDIGRHVNHLRKHPSNDVRRLVKLLVRKWKEIVDEWVKLKTPGEPATSIMADE 1072
            TFQALEETDIGRHVN LRKH SNDV+RLVKLLVRKWKEIVDEWVKLK PGEP T++MADE
Sbjct: 124  TFQALEETDIGRHVNRLRKHSSNDVKRLVKLLVRKWKEIVDEWVKLKAPGEPGTAVMADE 183

Query: 1073 ESPQQKTPQHGNHQIPDFAYSPNPHNGNGSFGLERNNTVAEVXXXXXXXXXXXXXXXXXX 1252
            +SPQQ+  Q+G+ QIPDFAYSPNPH   GSFG ERNN  AE                   
Sbjct: 184  DSPQQRILQNGHRQIPDFAYSPNPH--YGSFGSERNNIEAE--RKPKAIPRKEAPSKPSP 239

Query: 1253 XXXXXXXXXQNRQREQREDSERLASARRRLQENYKEAANAKKQRTIQVMDLHELPXXXXX 1432
                     QNRQRE   D +R ASAR+RLQENYK+AANAKKQRTIQVMDLHELP     
Sbjct: 240  SVTTPAPPTQNRQRESNFDPDRFASARKRLQENYKDAANAKKQRTIQVMDLHELP--KPK 297

Query: 1433 XXXXXXXXXSASQGRHW 1483
                        QGRHW
Sbjct: 298  NAFLGKNKGGTGQGRHW 314


>ref|XP_003525100.1| PREDICTED: uncharacterized protein LOC100820221 [Glycine max]
          Length = 313

 Score =  396 bits (1017), Expect = e-107
 Identities = 215/316 (68%), Positives = 235/316 (74%)
 Frame = +2

Query: 536  RSILESAGVDVWVLMDAAIAVASVDHGNELKRRRDGIVERLYTAAALPRCRNCDEVNNGE 715
            RSILESAGVDVW LMDAAIAVASVDH +ELKRRRD IVERLY ++ALP+CRNCD  N GE
Sbjct: 7    RSILESAGVDVWALMDAAIAVASVDHPDELKRRRDRIVERLYASSALPQCRNCDP-NAGE 65

Query: 716  IEKKQQQSSPLTEEEKDPYGGLFDDEQKKILEIKEQLEDPHQSEDSLVELLQNLDDMDIT 895
            I   + QSSP  EEEKDPYGG  D+EQKKIL IKEQLEDPHQSEDSLVELLQNL DMDIT
Sbjct: 66   I---RTQSSPSAEEEKDPYGGFMDEEQKKILYIKEQLEDPHQSEDSLVELLQNLADMDIT 122

Query: 896  FQALEETDIGRHVNHLRKHPSNDVRRLVKLLVRKWKEIVDEWVKLKTPGEPATSIMADEE 1075
            F ALEE+DIGR+VN LRKH SNDV+RLVKLLVRKWKEIVDEWVKLK+PG P T++MADE+
Sbjct: 123  FPALEESDIGRYVNRLRKHSSNDVKRLVKLLVRKWKEIVDEWVKLKSPGYPGTAVMADED 182

Query: 1076 SPQQKTPQHGNHQIPDFAYSPNPHNGNGSFGLERNNTVAEVXXXXXXXXXXXXXXXXXXX 1255
            SPQQ+  Q+G+ QIPDFAYSPNPHNG+ S   +RNN  AE                    
Sbjct: 183  SPQQRILQNGHRQIPDFAYSPNPHNGS-SGSSQRNNIEAE--RKPKAIPRKEAPPKPSPS 239

Query: 1256 XXXXXXXXQNRQREQREDSERLASARRRLQENYKEAANAKKQRTIQVMDLHELPXXXXXX 1435
                    QNRQRE   D +R ASAR+RLQENYKEAANAKKQRTIQVMDLHELP      
Sbjct: 240  VTTPASPPQNRQREGNFDPDRFASARKRLQENYKEAANAKKQRTIQVMDLHELP--KPKN 297

Query: 1436 XXXXXXXXSASQGRHW 1483
                       QGRHW
Sbjct: 298  AFLGKNKGGTGQGRHW 313


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c-like [Cucumis sativus]
            gi|449528150|ref|XP_004171069.1| PREDICTED: probable
            mediator of RNA polymerase II transcription subunit
            26c-like [Cucumis sativus]
          Length = 345

 Score =  358 bits (920), Expect = 2e-96
 Identities = 195/340 (57%), Positives = 231/340 (67%), Gaps = 24/340 (7%)
 Frame = +2

Query: 536  RSILESAGVDVWVLMDAAIAVASVDHGNELKRRRDGIVERLYTAAALP-RCRNCDEVNNG 712
            R+IL++AGVDVW  +D A+ VAS+D+GN+LK RRDGIVERLY   + P RCRNCD   N 
Sbjct: 10   RTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCDTDRNH 69

Query: 713  E-----IEKKQ-----QQSSPLT---------EEEKDPYGGLFDDEQKKILEIKEQLEDP 835
            +      E KQ     +++SP T         ++  DPY GLFDDEQKK+LEIKEQLE P
Sbjct: 70   DGRSNGCEIKQGSGEVKEASPSTPQFVVVEGDDDGADPYAGLFDDEQKKVLEIKEQLEIP 129

Query: 836  HQSEDSLVELLQNLDDMDITFQALEETDIGRHVNHLRKHPSNDVRRLVKLLVRKWKEIVD 1015
             Q ED+LVELLQNL DMDITFQAL+ETDIGRHVN LRKHPSNDVRRLVK LVRKWKEIVD
Sbjct: 130  QQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVD 189

Query: 1016 EWVKLKTPGEPATSIMADEESPQQKTPQHGNHQIPDFAYSPNPHNGNGSFGLERNNTVAE 1195
            EWV+L  PGE   +++AD +SPQQK PQ+G HQ+PDFAYSPNPHNG    G +RNN  +E
Sbjct: 190  EWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAYSPNPHNGGS--GSDRNN--SE 245

Query: 1196 VXXXXXXXXXXXXXXXXXXXXXXXXXXXQNRQREQRE----DSERLASARRRLQENYKEA 1363
                                        QNRQ+EQ++    DS++LASAR+RLQENYKEA
Sbjct: 246  PEPKGKSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEA 305

Query: 1364 ANAKKQRTIQVMDLHELPXXXXXXXXXXXXXXSASQGRHW 1483
             NAK+QRTIQVMD+HE+P                SQGRHW
Sbjct: 306  ENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRHW 345


>ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804034 [Glycine max]
          Length = 361

 Score =  353 bits (906), Expect = 9e-95
 Identities = 207/358 (57%), Positives = 235/358 (65%), Gaps = 42/358 (11%)
 Frame = +2

Query: 536  RSILESAGVDVWVLMDAAIAVASVDHGNELKRRRDGIVERLYTA-AALPRCRNCDE---- 700
            RS+L++AGVDVW+ +DAAIAVAS D   ELKRRRDGIVERLY A AA P+CR CD+    
Sbjct: 7    RSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRICDDGGND 66

Query: 701  VNNGEIEKKQQQS-----------------SPLT----------EEEKDPYGGLFDDEQK 799
            +N  +I+K+   S                 SP T          EE+ DPYGGLFDDEQK
Sbjct: 67   LNGHQIKKQSSPSPERQPHQRRAAAIAAAASPATPQSLENDNDGEEDLDPYGGLFDDEQK 126

Query: 800  KILEIKEQLEDPHQSEDSLVELLQNLDDMDITFQALEETDIGRHVNHLRKHPSNDVRRLV 979
            KILEIKEQLE+P QSEDSLVELLQ+L DMDITFQAL+ETDIGRHVN LRKHPSNDVRRLV
Sbjct: 127  KILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLV 186

Query: 980  KLLVRKWKEIVDEWVKLKTPGEPATSIMADEESPQ-QKTPQHGNH----QIPDFAYSPNP 1144
            KLLVRKWKEIVDEWVKL   G  + ++MAD +SP  QKT Q+G+H    +IPDFAYSPNP
Sbjct: 187  KLLVRKWKEIVDEWVKLNPQGR-SNTLMADGDSPPVQKTTQNGHHHQQVEIPDFAYSPNP 245

Query: 1145 HNGNGSFGLERNNTVAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXQNRQREQREDSERLA 1324
            H  NGS G +RNN+ AE                            QNRQR+   D+ERLA
Sbjct: 246  H--NGSSGSDRNNSEAEHKPKVVPRSEPRPKPAPSPSVSTPASATQNRQRDSNFDAERLA 303

Query: 1325 SARRRLQENYKEAANAKKQRTIQVMDLHELP-----XXXXXXXXXXXXXXSASQGRHW 1483
            SARRRLQENYKEA  AK+QRTIQVMD+HELP                     SQGRHW
Sbjct: 304  SARRRLQENYKEAEIAKRQRTIQVMDIHELPKSKPKNNAFFGKNKGGGGGGGSQGRHW 361


>ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790582 [Glycine max]
          Length = 356

 Score =  352 bits (902), Expect = 3e-94
 Identities = 205/352 (58%), Positives = 226/352 (64%), Gaps = 36/352 (10%)
 Frame = +2

Query: 536  RSILESAGVDVWVLMDAAIAVASVDHGNELKRRRDGIVERLYTA-AALPRCRNCDEVN-- 706
            RSIL++AGVDVW+ +DAAIAVAS D   +LKRRRDGIVERLY A AA P CRNCDE    
Sbjct: 7    RSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNCDEGGHR 66

Query: 707  -NGEIEKKQQQSSPLTE---------------------------EEKDPYGGLFDDEQKK 802
             NG   KKQ + SP  E                           E+ DPYGGL DDEQKK
Sbjct: 67   LNGHRIKKQSRHSPSPERQPHRSTATASPATPQSLDNGEDEDNDEDLDPYGGLLDDEQKK 126

Query: 803  ILEIKEQLEDPHQSEDSLVELLQNLDDMDITFQALEETDIGRHVNHLRKHPSNDVRRLVK 982
            ILEIKEQLE+P QSEDSLVELLQ+L DMDITFQ L+ETDIGRHVN LRKHPSND+RRLVK
Sbjct: 127  ILEIKEQLEEPDQSEDSLVELLQSLADMDITFQGLKETDIGRHVNRLRKHPSNDLRRLVK 186

Query: 983  LLVRKWKEIVDEWVKLKTPGEPATSIMADEESPQQKTPQHGNH-QIPDFAYSPNPHNGNG 1159
            LLVRKWKEIVDEWVKL   G   T +   + SP QKT Q+G+H QIPDFAYSPNPH  NG
Sbjct: 187  LLVRKWKEIVDEWVKLNPRGGSNTLMADGDSSPVQKTTQNGHHQQIPDFAYSPNPH--NG 244

Query: 1160 SFGLERNNTVAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXQNRQREQREDSERLASARRR 1339
            S G +RNN+ AE                            QNRQRE   D+ERLASARRR
Sbjct: 245  SSGSDRNNSEAERKPKVVPRSEPRPKHAPSPSVSTPASATQNRQRESSFDAERLASARRR 304

Query: 1340 LQENYKEAANAKKQRTIQVMDLHEL----PXXXXXXXXXXXXXXSASQGRHW 1483
            LQENYKEA  AK+QRTIQVMD+H+L    P                SQGRHW
Sbjct: 305  LQENYKEAEIAKRQRTIQVMDIHDLPKAKPKNNAFFGKNKGGGGGGSQGRHW 356


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