BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005154
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535678.1| PREDICTED: pre-mRNA-processing factor 40 hom...   305   1e-80
ref|XP_003555303.1| PREDICTED: pre-mRNA-processing factor 40 hom...   296   5e-78
ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-l...   166   6e-39
ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|2...   160   3e-37
emb|CBI19367.3| unnamed protein product [Vitis vinifera]              159   1e-36

>ref|XP_003535678.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine
           max]
          Length = 1017

 Score =  305 bits (780), Expect = 1e-80
 Identities = 162/251 (64%), Positives = 176/251 (70%), Gaps = 7/251 (2%)
 Frame = +2

Query: 110 MSNNPQFPGLQPLRPPIAGSVDPQRNFVPHMPVQFRPVVPSQLPQQFVPMPSQHYQ--PL 283
           M+NNPQ+PGLQPLRPPIAGS+DP RNFVP MPVQFRPVVP+Q  QQF+ MPSQHYQ  P+
Sbjct: 1   MANNPQYPGLQPLRPPIAGSLDPPRNFVPPMPVQFRPVVPTQQSQQFISMPSQHYQHQPV 60

Query: 284 GPG-VPMMNVGMXXXXXXXXXXXXXXXXXXRPTQQLPPPSQAIPMPVARPNMQIPSESMM 460
           GPG VP++ VGM                  RP+ QLPPPSQAIPMPVARPNM IPSESMM
Sbjct: 61  GPGGVPLIGVGMPPQNQRSQFSQPIQQLPPRPSPQLPPPSQAIPMPVARPNMHIPSESMM 120

Query: 461 PQHDSQ----APNGYTXXXXXXXXXXXXXXXXXXXXXGQVQTNFSSTSQYQPVPQIQAPA 628
            Q DSQ    APNGYT                     GQVQTNFSST Q+QPVPQI A  
Sbjct: 121 HQPDSQVHSQAPNGYTPGLGGPAMPLSASYTFAPSAYGQVQTNFSSTGQFQPVPQIHALT 180

Query: 629 GSSSQITTPGTTPQSNSEQPTVTSVMPSAPIVQPQPAKVGSSDWIEHTSATGRRFYYNKR 808
           GSSSQ  T G T QSN  QP+VT+VMPSA I QPQ AK G +DWIEHTSATGR FYYNK+
Sbjct: 181 GSSSQSITTGATLQSNGGQPSVTTVMPSATIAQPQLAKNGPTDWIEHTSATGRTFYYNKK 240

Query: 809 TKVSSWEKRSE 841
           TKVSSWEK  E
Sbjct: 241 TKVSSWEKPFE 251


>ref|XP_003555303.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Glycine
           max]
          Length = 1072

 Score =  296 bits (757), Expect = 5e-78
 Identities = 157/251 (62%), Positives = 171/251 (68%), Gaps = 7/251 (2%)
 Frame = +2

Query: 110 MSNNPQFPGLQPLRPPIAGSVDPQRNFVPHMPVQFRPVVPSQLPQQFVPMPSQHYQ--PL 283
           MSNNPQ+PGLQPLRPPIAGS+DP RNFVP MPVQFRP VP+Q  QQF+ MPSQHYQ  P+
Sbjct: 1   MSNNPQYPGLQPLRPPIAGSLDPPRNFVPPMPVQFRPAVPTQQSQQFISMPSQHYQHQPV 60

Query: 284 GPG-VPMMNVGMXXXXXXXXXXXXXXXXXXRPTQQLPPPSQAIPMPVARPNMQIPSESMM 460
           GPG VP++ VG+                  RP+ QLPPPSQAIPMPVARPNM IPSESMM
Sbjct: 61  GPGGVPLIGVGIPPQNQQPQFSQPIQQLPPRPSPQLPPPSQAIPMPVARPNMHIPSESMM 120

Query: 461 PQHDSQA----PNGYTXXXXXXXXXXXXXXXXXXXXXGQVQTNFSSTSQYQPVPQIQAPA 628
            Q DSQA    PNGYT                     GQVQ NF+ST Q+QPVPQI A  
Sbjct: 121 QQSDSQAHSQAPNGYTPGLGGPGMPLSSSYTFAPSTYGQVQANFNSTGQFQPVPQIHALT 180

Query: 629 GSSSQITTPGTTPQSNSEQPTVTSVMPSAPIVQPQPAKVGSSDWIEHTSATGRRFYYNKR 808
           GSSSQ  T G T QSN  QP VT+VMP A I QPQ  K G +DWIEHTSATGR FYYNK+
Sbjct: 181 GSSSQSITTGATLQSNGGQPLVTTVMPLATIAQPQLTKNGPTDWIEHTSATGRTFYYNKK 240

Query: 809 TKVSSWEKRSE 841
           TKVSSWEK  E
Sbjct: 241 TKVSSWEKPFE 251


>ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 983

 Score =  166 bits (420), Expect = 6e-39
 Identities = 108/253 (42%), Positives = 131/253 (51%), Gaps = 9/253 (3%)
 Frame = +2

Query: 110 MSNNPQFPGLQPLRPPIAGSVDPQRNFVPHMPVQFRPVVPSQLPQQFVPMPSQHYQPLGP 289
           M+NNPQ+ GLQPLRPP+ G +D  R+FVP M  QFRP VP    QQFVP+PS H+QPLG 
Sbjct: 1   MANNPQYSGLQPLRPPVVGPMDQGRSFVPPMTAQFRPAVPGPHSQQFVPLPSPHFQPLGQ 60

Query: 290 GVPMMNVGMXXXXXXXXXXXXXXXXXXRPTQQLPP-----PSQAIPMPVARPNMQIPSES 454
           GVP+MN GM                   P +   P     P Q IP+PVA+ N Q   E 
Sbjct: 61  GVPLMNAGMPPPPPQAQQSQFSQPVAHLPLRPCEPVHGTLPPQTIPLPVAQQNRQYTPEL 120

Query: 455 MMPQHDSQAPNGYTXXXXXXXXXXXXXXXXXXXXXGQVQTNFSSTSQYQPVPQIQAPAGS 634
              Q     P                         G  Q N+++T   QPVPQ  AP  S
Sbjct: 121 QQAQ-----PLTQPAAIGMPGPGGSGTSLSASYSYGPPQ-NYNTTI-VQPVPQSHAPVVS 173

Query: 635 S-SQI-TTPGTTPQSNS-EQPTVTSVMPSAPIVQPQP-AKVGSSDWIEHTSATGRRFYYN 802
           S  Q+ +    TP ++S EQP  TS + SA  V   P A   SS+W EHTS  GRR+YYN
Sbjct: 174 SGGQLGSLVSVTPLNHSREQPYATSSVTSAANVLLMPSATAASSEWREHTSPDGRRYYYN 233

Query: 803 KRTKVSSWEKRSE 841
           K+TK+SSWEK  E
Sbjct: 234 KKTKISSWEKPFE 246


>ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|222847542|gb|EEE85089.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score =  160 bits (405), Expect = 3e-37
 Identities = 95/254 (37%), Positives = 122/254 (48%), Gaps = 10/254 (3%)
 Frame = +2

Query: 110 MSNNPQFPGLQPLRPPIAGSVDPQRNFVPHMPVQFRPVVPSQLPQQFVPMPSQHYQPLGP 289
           M+NNPQF G+Q                       FRPV P Q  QQF+P+ S H+QP+G 
Sbjct: 1   MANNPQFSGMQ-----------------------FRPVGPVQPSQQFIPVSSPHFQPVGR 37

Query: 290 GVPMMNVGMXXXXXXXXXXXXXXXXXXRPTQQL--PPPSQAIPMPVARPNMQIPSESMMP 463
           GV +MN G+                  RP Q    PPP QAIP+P A+PN  + S S +P
Sbjct: 38  GVTVMNPGLPPQPPQPQFPHPMQQLPARPNQPSLGPPPPQAIPLPNAQPNRHVMSGSPLP 97

Query: 464 QHDSQAPNGYTXXXXXXXXXXXXXXXXXXXXXGQVQTNFSSTSQYQPVPQIQA------- 622
               Q PN Y                      GQ    F++ +Q+QP+PQ+         
Sbjct: 98  PPSVQTPNSYMPGLGGPGVPLSSSYTFAPSSYGQPPVTFNAVTQFQPMPQMHVQPIPTGG 157

Query: 623 -PAGSSSQITTPGTTPQSNSEQPTVTSVMPSAPIVQPQPAKVGSSDWIEHTSATGRRFYY 799
            PA S +  T P T  Q N EQ +VT+    A  +QP+P +   ++W EHTSA GRRFYY
Sbjct: 158 HPASSMNHNTAPVTPIQRNGEQSSVTTTNVRATSIQPKPTEEALTEWKEHTSANGRRFYY 217

Query: 800 NKRTKVSSWEKRSE 841
           NKRT+ SSWEK  E
Sbjct: 218 NKRTRQSSWEKPYE 231


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  159 bits (401), Expect = 1e-36
 Identities = 95/253 (37%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
 Frame = +2

Query: 110 MSNNPQFPGLQPLRPPIAGSVDPQRNFVPHMPVQFRPVVPSQLPQQFVPMPSQHYQPLGP 289
           M+NNPQ  G QPLRPP  GS+ PQ NF P + +QFRP VP Q    F+P  SQ ++P+G 
Sbjct: 1   MANNPQSSGAQPLRPPAVGSMGPQ-NFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQ 59

Query: 290 GVPMMNVG-MXXXXXXXXXXXXXXXXXXRPTQQLP--PPSQAIPMPVARPNMQIPSESMM 460
            +   NVG                    RP Q  P  P SQ IPMP  + N  + S S  
Sbjct: 60  NISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQ 119

Query: 461 PQHDSQAPNGYTXXXXXXXXXXXXXXXXXXXXXGQVQTNFSSTSQYQPVPQIQAPAG--- 631
           P   +   N +                      GQ Q+  ++++Q+QP+ Q+ AP G   
Sbjct: 120 PNQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTINASAQFQPISQMHAPVGGQP 179

Query: 632 ---SSSQITTPGTTPQSNSEQPTVTSVMPSAPIVQPQPAKVGSSDWIEHTSATGRRFYYN 802
              S SQ     T      +QP+VT+ +P+  +  P P    SSDW EHTSA GRR+YYN
Sbjct: 180 WLSSGSQSGALVTPVHQAGQQPSVTADIPAGNV--PNPTHQSSSDWQEHTSADGRRYYYN 237

Query: 803 KRTKVSSWEKRSE 841
           K+T++SSWEK  E
Sbjct: 238 KKTRLSSWEKPLE 250