BLASTX nr result

ID: Glycyrrhiza24_contig00005058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005058
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40441.1| unknown [Lotus japonicus]                              373   e-101
ref|XP_003523350.1| PREDICTED: thylakoid lumenal 17.4 kDa protei...   365   7e-99
ref|NP_001241901.1| uncharacterized protein LOC100785667 [Glycin...   356   4e-96
gb|ACJ84164.1| unknown [Medicago truncatula]                          352   1e-94
ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protei...   301   1e-79

>gb|AFK40441.1| unknown [Lotus japonicus]
          Length = 239

 Score =  373 bits (957), Expect = e-101
 Identities = 193/217 (88%), Positives = 198/217 (91%)
 Frame = +2

Query: 41  NVSIPLPRNGLSIRNFSTKRHRRFTTSASTLRITCSGGDELDGSESKAGLLNFNRVKGVA 220
           NVSIPLPRNGLSI N STKR    TTS STLRI+CSG  ELDGSE K  LLNFN +K VA
Sbjct: 4   NVSIPLPRNGLSIHNHSTKRSC-LTTSPSTLRISCSGVGELDGSECKGRLLNFNGIKSVA 62

Query: 221 CGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRLCDF 400
           CGILAAC V S+AFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRLCDF
Sbjct: 63  CGILAACAVTSAAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRLCDF 122

Query: 401 TNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 580
           TNEKSNLKGK+LSAALMSDAKFDGADM+EVVMSKAYAVG SFKGVDFSNAVLDRVNF KA
Sbjct: 123 TNEKSNLKGKTLSAALMSDAKFDGADMTEVVMSKAYAVGGSFKGVDFSNAVLDRVNFEKA 182

Query: 581 DLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDL 691
           DLQGAVFKNTVLSGSTFDDAKLE AVFEDTIIGYIDL
Sbjct: 183 DLQGAVFKNTVLSGSTFDDAKLEGAVFEDTIIGYIDL 219


>ref|XP_003523350.1| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 240

 Score =  365 bits (938), Expect = 7e-99
 Identities = 185/220 (84%), Positives = 201/220 (91%), Gaps = 1/220 (0%)
 Frame = +2

Query: 35  MANVSIPLPRNGLSIRNFSTKRHRRFTTSASTLRITCSGGDELDGS-ESKAGLLNFNRVK 211
           M  VSIP+P+NG SIRNFST +   FT S STLRI+CSG  ELDGS E+K GL NFN +K
Sbjct: 1   MGKVSIPVPQNGFSIRNFSTSKRSCFTPSPSTLRISCSGVAELDGSHENKGGLFNFNGIK 60

Query: 212 GVACGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRL 391
           GVACGILAACTV S+AFPVTAA QRLPPLST+P+RCERAF+GNTIGQANGVYDKPLDLR 
Sbjct: 61  GVACGILAACTVTSAAFPVTAATQRLPPLSTEPHRCERAFIGNTIGQANGVYDKPLDLRQ 120

Query: 392 CDFTNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 571
           CDFT+EK+NLKGKSLSAALMSDAKFDGADM+EVVMSKAYAVGASFKGVDFSNAVLDRVNF
Sbjct: 121 CDFTDEKTNLKGKSLSAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVLDRVNF 180

Query: 572 GKADLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDL 691
            KADL+GAVFKNTVLSGSTFDDAKL++AVFEDTIIGYIDL
Sbjct: 181 EKADLEGAVFKNTVLSGSTFDDAKLDNAVFEDTIIGYIDL 220


>ref|NP_001241901.1| uncharacterized protein LOC100785667 [Glycine max]
           gi|255647148|gb|ACU24042.1| unknown [Glycine max]
          Length = 239

 Score =  356 bits (914), Expect = 4e-96
 Identities = 184/219 (84%), Positives = 196/219 (89%), Gaps = 1/219 (0%)
 Frame = +2

Query: 35  MANVSIPLPRNGLSIRNFSTKRHRRFTTSASTLRITCSGGDELDGS-ESKAGLLNFNRVK 211
           MANVSIPLPRNG S  N+STKR   FT SASTLRI+CSG  E DGS + K GL NFN +K
Sbjct: 1   MANVSIPLPRNGFSKPNYSTKRPC-FTPSASTLRISCSGVAEFDGSHQKKGGLFNFNGIK 59

Query: 212 GVACGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLRL 391
           GVACGILAAC V S+AFPVTAA QRLPPLST+PNRCERAFVGNTIGQANGVYDKPLDLR 
Sbjct: 60  GVACGILAACAVTSAAFPVTAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRQ 119

Query: 392 CDFTNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 571
           CDFTNEK+NLKGKS SAALMSDAKFDGADM+EVVMSKAYA GASFKGVDFSNAVLDRVNF
Sbjct: 120 CDFTNEKTNLKGKSPSAALMSDAKFDGADMTEVVMSKAYAAGASFKGVDFSNAVLDRVNF 179

Query: 572 GKADLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYID 688
            KADL+GA+FKNTVLSGS FDDAKL++AVFEDTIIGYID
Sbjct: 180 EKADLEGAIFKNTVLSGSPFDDAKLDNAVFEDTIIGYID 218


>gb|ACJ84164.1| unknown [Medicago truncatula]
          Length = 240

 Score =  352 bits (902), Expect = 1e-94
 Identities = 185/221 (83%), Positives = 196/221 (88%), Gaps = 2/221 (0%)
 Frame = +2

Query: 35  MANVSIPLPRNGLSIRNFSTKRHRRFTTSASTLRITCS--GGDELDGSESKAGLLNFNRV 208
           MAN+SI LPR  LSIRNFSTKR   FTTSA    ITCS  G  ELDG+E+K  LL+ N++
Sbjct: 1   MANLSIQLPRTSLSIRNFSTKRPC-FTTSALPFTITCSVVGEAELDGTENKPRLLSLNKI 59

Query: 209 KGVACGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPLDLR 388
           KGVACGILAA  V S++FPVTAA QRLPPLSTDPNRCERAFVGNTIGQANGVYDK LDLR
Sbjct: 60  KGVACGILAAYAVTSASFPVTAATQRLPPLSTDPNRCERAFVGNTIGQANGVYDKALDLR 119

Query: 389 LCDFTNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVN 568
            CDFTNEKSNLKGK+LSAALMSDAKFDGADM+EVVMSKAYAVG SFKGVDFSNAVLDRVN
Sbjct: 120 KCDFTNEKSNLKGKTLSAALMSDAKFDGADMTEVVMSKAYAVGGSFKGVDFSNAVLDRVN 179

Query: 569 FGKADLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDL 691
           FGKADLQGAVF+NTVLSGSTFDDAKLE AVFEDTIIGYIDL
Sbjct: 180 FGKADLQGAVFRNTVLSGSTFDDAKLEGAVFEDTIIGYIDL 220


>ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Vitis
           vinifera]
          Length = 244

 Score =  301 bits (772), Expect = 1e-79
 Identities = 166/224 (74%), Positives = 183/224 (81%), Gaps = 1/224 (0%)
 Frame = +2

Query: 23  REKTMANVSIPLPRNGLSIRNFSTKRHRRFTTSA-STLRITCSGGDELDGSESKAGLLNF 199
           REK MA +SIPL     S+++ S KRHR       S  RI+CS     D  E KA    F
Sbjct: 10  REK-MATLSIPL-----SLQHSSPKRHRFSVPELHSPFRISCSAS--WDSPELKASSSQF 61

Query: 200 NRVKGVACGILAACTVASSAFPVTAANQRLPPLSTDPNRCERAFVGNTIGQANGVYDKPL 379
             +K VA GILA C V ++A PV AA+QRLPPLST+PNRCERAFVGNTIGQANGVYDKP+
Sbjct: 62  KELKNVAFGILAVCAV-TAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPI 120

Query: 380 DLRLCDFTNEKSNLKGKSLSAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLD 559
           DLR CD+TNEKSNLKGKSL+AALMS+AKFDGADMSEVVMSKAYAVGASFKGVDF+NAVLD
Sbjct: 121 DLRFCDYTNEKSNLKGKSLAAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLD 180

Query: 560 RVNFGKADLQGAVFKNTVLSGSTFDDAKLEDAVFEDTIIGYIDL 691
           RVNFGKA+LQGAVFKNTVLSGSTFD A+LEDAVFEDTIIGYIDL
Sbjct: 181 RVNFGKANLQGAVFKNTVLSGSTFDQAQLEDAVFEDTIIGYIDL 224


Top