BLASTX nr result

ID: Glycyrrhiza24_contig00005056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005056
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540320.1| PREDICTED: cyclin-U1-1-like [Glycine max]         366   5e-99
ref|XP_003597030.1| Cyclin-U1-1 [Medicago truncatula] gi|3554860...   365   1e-98
ref|NP_001235448.1| uncharacterized protein LOC100527137 [Glycin...   365   1e-98
gb|ABX10779.1| putative cyclin-dependent protein kinase [Glycine...   322   8e-86
ref|XP_002310464.1| predicted protein [Populus trichocarpa] gi|2...   299   7e-79

>ref|XP_003540320.1| PREDICTED: cyclin-U1-1-like [Glycine max]
          Length = 232

 Score =  366 bits (940), Expect = 5e-99
 Identities = 188/232 (81%), Positives = 200/232 (86%), Gaps = 3/232 (1%)
 Frame = -3

Query: 911 MLGASEYSNHGRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSCG 732
           ML A +YSNHGR LQP T  AELNLPRVLCVLSS LEKLVARNEKL+D L+Q+LDGL+ G
Sbjct: 1   MLTAGDYSNHGRPLQPETSLAELNLPRVLCVLSSMLEKLVARNEKLIDILSQELDGLNSG 60

Query: 731 SVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYVDRLTHRHPDSLVLS 552
           SVRLG SLN FHGVRAP ISIPKYLERIYKYT+CSPSCFVVGYVY+DRLTHRHPDSLV S
Sbjct: 61  SVRLGNSLNTFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTS 120

Query: 551 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXLDFNVMVSSRV 372
           LNVHRLLVTSVMVASKMLDDEHYNNA+YARVGGVSNA            LDF VMVSSRV
Sbjct: 121 LNVHRLLVTSVMVASKMLDDEHYNNAIYARVGGVSNAELNKLELELLFLLDFRVMVSSRV 180

Query: 371 FENYCLHLEKEMVVNGTGLKIERALTPKA---IETEISIEDSQSFSPPQIVD 225
           FE+YC HLEKEMVVNGTG+KIERALTPKA   +ETEISIED QS SPPQIV+
Sbjct: 181 FESYCFHLEKEMVVNGTGMKIERALTPKAMDDLETEISIEDKQSPSPPQIVE 232


>ref|XP_003597030.1| Cyclin-U1-1 [Medicago truncatula] gi|355486078|gb|AES67281.1|
           Cyclin-U1-1 [Medicago truncatula]
          Length = 233

 Score =  365 bits (937), Expect = 1e-98
 Identities = 186/230 (80%), Positives = 199/230 (86%)
 Frame = -3

Query: 911 MLGASEYSNHGRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSCG 732
           ML ASEYSNH RQ QP T  AELNLPRVL +LSSTLEKLV+RNEKLVD+LNQ+LD L+ G
Sbjct: 1   MLTASEYSNHSRQNQPVTGPAELNLPRVLWILSSTLEKLVSRNEKLVDELNQELDKLNNG 60

Query: 731 SVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYVDRLTHRHPDSLVLS 552
           SVRLGKSLN FHGVRAPGISIPKYLERIYKYT+CSPSCFVVGYVY+D LTH+HPDSLVLS
Sbjct: 61  SVRLGKSLNLFHGVRAPGISIPKYLERIYKYTNCSPSCFVVGYVYIDMLTHKHPDSLVLS 120

Query: 551 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXLDFNVMVSSRV 372
           LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNA            LDF VMV  RV
Sbjct: 121 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAELNKLELELLFLLDFKVMVCPRV 180

Query: 371 FENYCLHLEKEMVVNGTGLKIERALTPKAIETEISIEDSQSFSPPQIVDY 222
           FE+YCLHLEKEM+VNGTGLKIER L+PK+ ETEIS+ED QS SPP IVDY
Sbjct: 181 FESYCLHLEKEMLVNGTGLKIERILSPKSFETEISVEDQQSSSPPPIVDY 230


>ref|NP_001235448.1| uncharacterized protein LOC100527137 [Glycine max]
           gi|255631636|gb|ACU16185.1| unknown [Glycine max]
          Length = 232

 Score =  365 bits (937), Expect = 1e-98
 Identities = 187/232 (80%), Positives = 197/232 (84%), Gaps = 3/232 (1%)
 Frame = -3

Query: 911 MLGASEYSNHGRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSCG 732
           ML A EYSNH   LQP T   ELNLPRVLC+LSS LEKLVARNEKLVD L+QQLDGL+CG
Sbjct: 1   MLTAGEYSNHSWPLQPETSLTELNLPRVLCILSSMLEKLVARNEKLVDILSQQLDGLNCG 60

Query: 731 SVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYVDRLTHRHPDSLVLS 552
           SVRLG SLN FHGVRAP ISIPKYLERIYKYT+CSPSCFVVGYVY+DRLTHRHPDSLV S
Sbjct: 61  SVRLGNSLNTFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTS 120

Query: 551 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXLDFNVMVSSRV 372
           LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSN             LDF VMVSSRV
Sbjct: 121 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNTELNKLELELLFLLDFRVMVSSRV 180

Query: 371 FENYCLHLEKEMVVNGTGLKIERALTPKA---IETEISIEDSQSFSPPQIVD 225
           FE+YC HLEKEMV+NGTG+KIERALTPKA   +ETEIS+ED QS SPPQIVD
Sbjct: 181 FESYCFHLEKEMVINGTGMKIERALTPKAMDDLETEISVEDKQSPSPPQIVD 232


>gb|ABX10779.1| putative cyclin-dependent protein kinase [Glycine max]
           gi|159902361|gb|ABX10780.1| putative cyclin-dependent
           protein kinase [Glycine soja]
          Length = 198

 Score =  322 bits (826), Expect = 8e-86
 Identities = 162/198 (81%), Positives = 171/198 (86%)
 Frame = -3

Query: 911 MLGASEYSNHGRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSCG 732
           ML A +YSNHGR LQP T  AELNLPRVLCVLSS LEKLVARNEKL+D L+Q+LDGL+ G
Sbjct: 1   MLTAGDYSNHGRPLQPETSLAELNLPRVLCVLSSMLEKLVARNEKLIDILSQELDGLNSG 60

Query: 731 SVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYVDRLTHRHPDSLVLS 552
           SVRLG SLN FHGVRAP ISIPKYLERIYKYT+CSPSCFVVGYVY+DRLTHRHPDSLV S
Sbjct: 61  SVRLGNSLNTFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTS 120

Query: 551 LNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXLDFNVMVSSRV 372
           LNVHRLLVTSVMVASKMLDDEHYNNA+YARVGGVSNA            LDF VMVSSRV
Sbjct: 121 LNVHRLLVTSVMVASKMLDDEHYNNAIYARVGGVSNAELNKLELELLFLLDFRVMVSSRV 180

Query: 371 FENYCLHLEKEMVVNGTG 318
           FE+YC HLEKEMVVNGTG
Sbjct: 181 FESYCFHLEKEMVVNGTG 198


>ref|XP_002310464.1| predicted protein [Populus trichocarpa] gi|222853367|gb|EEE90914.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  299 bits (766), Expect = 7e-79
 Identities = 154/232 (66%), Positives = 184/232 (79%), Gaps = 3/232 (1%)
 Frame = -3

Query: 911 MLGASEY-SNHGRQLQPATMAAELNLPRVLCVLSSTLEKLVARNEKLVDDLNQQLDGLSC 735
           MLG+ +  SN  RQ +P+   +E   PRVL +LS  +EKLVARN+KLVDD++++LDG+S 
Sbjct: 1   MLGSGDLTSNLSRQSEPSP--SESTTPRVLTILSHVIEKLVARNDKLVDDMDKKLDGVSS 58

Query: 734 GSVRLGKSLNAFHGVRAPGISIPKYLERIYKYTDCSPSCFVVGYVYVDRLTHRHPDSLVL 555
           G  R+GKSLN FHGVRAP ISI KYLER+YKYT CSPSCFVVGYVY+DRLTH+HPDSLV+
Sbjct: 59  GLARVGKSLNVFHGVRAPNISIVKYLERLYKYTSCSPSCFVVGYVYIDRLTHKHPDSLVI 118

Query: 554 SLNVHRLLVTSVMVASKMLDDEHYNNAVYARVGGVSNAXXXXXXXXXXXXLDFNVMVSSR 375
           SLNVHRLLVTSVMVASKMLDD HYNNA YARVGGVSNA            LDF V+VSSR
Sbjct: 119 SLNVHRLLVTSVMVASKMLDDVHYNNAFYARVGGVSNAELNRLEMEFLFLLDFGVVVSSR 178

Query: 374 VFENYCLHLEKEMVVNGTGLKIERALTPKAIE--TEISIEDSQSFSPPQIVD 225
           VFE+YC HLEKEM++NG   +IERA+   A++  TE+S+ED+QS SPPQ +D
Sbjct: 179 VFESYCSHLEKEMMINGASQRIERAIVSNAVDDVTELSVEDTQSSSPPQGMD 230


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