BLASTX nr result

ID: Glycyrrhiza24_contig00005046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005046
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602090.1| Ribonuclease J [Medicago truncatula] gi|3554...   243   2e-62
ref|XP_003526967.1| PREDICTED: ribonuclease J-like [Glycine max]      238   5e-61
ref|XP_003522430.1| PREDICTED: ribonuclease J-like [Glycine max]      238   7e-61
emb|CBI15641.3| unnamed protein product [Vitis vinifera]              226   3e-57
ref|XP_002279798.1| PREDICTED: ribonuclease J-like [Vitis vinifera]   226   3e-57

>ref|XP_003602090.1| Ribonuclease J [Medicago truncatula] gi|355491138|gb|AES72341.1|
           Ribonuclease J [Medicago truncatula]
          Length = 959

 Score =  243 bits (620), Expect = 2e-62
 Identities = 122/150 (81%), Positives = 127/150 (84%), Gaps = 2/150 (1%)
 Frame = -2

Query: 445 RSKPTRLSVSVSALP--GTDXXXXXXXXXXXXXXXXXXKSMEDSVQRKMEQFYEGSDGPP 272
           RSKPTRLSVS SAL   G D                  KSMEDSVQR+MEQFYEG+DGPP
Sbjct: 18  RSKPTRLSVSASALSASGNDGSTSRVPQKRRRRIEGPRKSMEDSVQRRMEQFYEGNDGPP 77

Query: 271 LRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIE 92
           LRVLPIGGLGEIGMNCMLVGNHDRYILIDAG+MFPDYD+LGVQKIIPDTTFIRKWSHKIE
Sbjct: 78  LRVLPIGGLGEIGMNCMLVGNHDRYILIDAGIMFPDYDDLGVQKIIPDTTFIRKWSHKIE 137

Query: 91  ALVITHGHEDHIGALPWVIPALDSDTPIFA 2
           ALVITHGHEDHIGALPWVIPALDS+TPIFA
Sbjct: 138 ALVITHGHEDHIGALPWVIPALDSNTPIFA 167


>ref|XP_003526967.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 874

 Score =  238 bits (607), Expect = 5e-61
 Identities = 118/151 (78%), Positives = 125/151 (82%), Gaps = 3/151 (1%)
 Frame = -2

Query: 445 RSKPTRLSVSVSALPGTDXXXXXXXXXXXXXXXXXXK---SMEDSVQRKMEQFYEGSDGP 275
           R KPT LS S+SA+PG+                       SMEDSVQRKMEQFYEGSDGP
Sbjct: 17  RPKPTTLSASLSAIPGSSDGSKTKVPPRKRRTGRIEGPRKSMEDSVQRKMEQFYEGSDGP 76

Query: 274 PLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKI 95
           PLR+LPIGGLGEIGMNCMLVGN+DRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKI
Sbjct: 77  PLRILPIGGLGEIGMNCMLVGNNDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKI 136

Query: 94  EALVITHGHEDHIGALPWVIPALDSDTPIFA 2
           EAL+ITHGHEDHIGALPWVIPALDS+TPIFA
Sbjct: 137 EALIITHGHEDHIGALPWVIPALDSNTPIFA 167


>ref|XP_003522430.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 888

 Score =  238 bits (606), Expect = 7e-61
 Identities = 122/153 (79%), Positives = 126/153 (82%), Gaps = 5/153 (3%)
 Frame = -2

Query: 445 RSKPTR-LSVSVSALPGTDXXXXXXXXXXXXXXXXXXK----SMEDSVQRKMEQFYEGSD 281
           R KPT  LS S+SA+PGT                   +    SMEDSVQRKMEQFYEGSD
Sbjct: 17  RPKPTTSLSASLSAIPGTGSSDGSKTKVPPRKRTRRIEGPRKSMEDSVQRKMEQFYEGSD 76

Query: 280 GPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSH 101
           GPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSH
Sbjct: 77  GPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSH 136

Query: 100 KIEALVITHGHEDHIGALPWVIPALDSDTPIFA 2
           KIEALVITHGHEDHIGALPWVIPALDS+TPIFA
Sbjct: 137 KIEALVITHGHEDHIGALPWVIPALDSNTPIFA 169


>emb|CBI15641.3| unnamed protein product [Vitis vinifera]
          Length = 1659

 Score =  226 bits (575), Expect = 3e-57
 Identities = 114/147 (77%), Positives = 120/147 (81%)
 Frame = -2

Query: 442  SKPTRLSVSVSALPGTDXXXXXXXXXXXXXXXXXXKSMEDSVQRKMEQFYEGSDGPPLRV 263
            S PT +  SVS +P                     KSMEDSVQRKMEQFYEGS+GPPLRV
Sbjct: 804  SAPTSVGTSVSKVP----------RKRSRRMEGVKKSMEDSVQRKMEQFYEGSEGPPLRV 853

Query: 262  LPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALV 83
            LPIGGLGEIGMNCMLVGN+DRYILIDAGVMFPDYDELGVQKIIPDTTFI+KWSHKIEA+V
Sbjct: 854  LPIGGLGEIGMNCMLVGNYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEAVV 913

Query: 82   ITHGHEDHIGALPWVIPALDSDTPIFA 2
            ITHGHEDHIGALPWVIPALDS TPIFA
Sbjct: 914  ITHGHEDHIGALPWVIPALDSHTPIFA 940


>ref|XP_002279798.1| PREDICTED: ribonuclease J-like [Vitis vinifera]
          Length = 886

 Score =  226 bits (575), Expect = 3e-57
 Identities = 114/147 (77%), Positives = 120/147 (81%)
 Frame = -2

Query: 442 SKPTRLSVSVSALPGTDXXXXXXXXXXXXXXXXXXKSMEDSVQRKMEQFYEGSDGPPLRV 263
           S PT +  SVS +P                     KSMEDSVQRKMEQFYEGS+GPPLRV
Sbjct: 31  SAPTSVGTSVSKVP----------RKRSRRMEGVKKSMEDSVQRKMEQFYEGSEGPPLRV 80

Query: 262 LPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALV 83
           LPIGGLGEIGMNCMLVGN+DRYILIDAGVMFPDYDELGVQKIIPDTTFI+KWSHKIEA+V
Sbjct: 81  LPIGGLGEIGMNCMLVGNYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEAVV 140

Query: 82  ITHGHEDHIGALPWVIPALDSDTPIFA 2
           ITHGHEDHIGALPWVIPALDS TPIFA
Sbjct: 141 ITHGHEDHIGALPWVIPALDSHTPIFA 167


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