BLASTX nr result

ID: Glycyrrhiza24_contig00005038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005038
         (1716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546337.1| PREDICTED: coatomer subunit beta'-2-like [Gl...   559   e-157
ref|XP_002304183.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120
ref|XP_002299635.1| predicted protein [Populus trichocarpa] gi|2...   434   e-119
ref|NP_001185203.1| coatomer subunit beta'-2 [Arabidopsis thalia...   432   e-118
ref|XP_002891693.1| hypothetical protein ARALYDRAFT_474357 [Arab...   432   e-118

>ref|XP_003546337.1| PREDICTED: coatomer subunit beta'-2-like [Glycine max]
          Length = 307

 Score =  559 bits (1441), Expect = e-157
 Identities = 262/307 (85%), Positives = 284/307 (92%)
 Frame = +3

Query: 309  MEQTLSFEIEHDFVQSSERVKSVDLHPTEPWVLLGLYSGTISIWNYQTKTEEKSFKLSEF 488
            MEQTLSFE EH+FVQ++ RVKSVD+HPTEPW+LLGLYSGTISIWNYQTKTEEKS K+SE 
Sbjct: 1    MEQTLSFEFEHEFVQNTARVKSVDMHPTEPWILLGLYSGTISIWNYQTKTEEKSLKISES 60

Query: 489  PVRSAKFIARENWVVAATDDKYIRVYNYEKMEKLVEFEAHKDYIRSLAVHPSLPYVVSAS 668
            PVRSAKFIARENW+VAATDDK I VYNY+KMEK+VEF  HKDYIRSLAVHP LPYV+SAS
Sbjct: 61   PVRSAKFIARENWIVAATDDKNIHVYNYDKMEKIVEFAEHKDYIRSLAVHPVLPYVISAS 120

Query: 669  DDQVLKLWNWNKGWACHETFEGHSHYVMQVAFNPKDPSTFVSASLDGTLKIWSLDSSAPD 848
            DDQVLKLWNW KGW+C+E FEGHSHYVMQVAFNPKDPSTF SASLDGTLKIWSLDSSAP+
Sbjct: 121  DDQVLKLWNWRKGWSCYENFEGHSHYVMQVAFNPKDPSTFASASLDGTLKIWSLDSSAPN 180

Query: 849  FTLDGHLKGVNCVDYFVSNDKQYLLSGSDDYTAKVWDYCSRNCVQTLEGHENNVTAACAH 1028
            FTL+GH KGVNCVDYF++NDKQYLLSGSDDYTAKVWDY SRNCVQTLEGHENNVTA CAH
Sbjct: 181  FTLEGHQKGVNCVDYFITNDKQYLLSGSDDYTAKVWDYHSRNCVQTLEGHENNVTAICAH 240

Query: 1029 PELPIIITASEDSTVKIWDAVTFRLHTMLNFGLERGWSIGYKKGSSQLAFGCDKGFIIVT 1208
            PELPIIITASEDSTVKIWDAVT+RL T LNFGL+R WSIGYKKGSSQLAFGCD+GF+IV 
Sbjct: 241  PELPIIITASEDSTVKIWDAVTYRLQTTLNFGLKRVWSIGYKKGSSQLAFGCDQGFLIVK 300

Query: 1209 VNSATCQ 1229
            ++    Q
Sbjct: 301  ISEGRPQ 307


>ref|XP_002304183.1| predicted protein [Populus trichocarpa] gi|222841615|gb|EEE79162.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  437 bits (1123), Expect = e-120
 Identities = 205/343 (59%), Positives = 256/343 (74%)
 Frame = +3

Query: 255  QPNVLGSTIEFEATKSPNMEQTLSFEIEHDFVQSSERVKSVDLHPTEPWVLLGLYSGTIS 434
            +  VL + I+F  TK     Q L  EI+    Q SERVKSVDLHPTEPW+L+ LYSGT+ 
Sbjct: 15   ESEVLDARIDFLVTKWS--VQPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGTVC 72

Query: 435  IWNYQTKTEEKSFKLSEFPVRSAKFIARENWVVAATDDKYIRVYNYEKMEKLVEFEAHKD 614
            IWNYQ++T  KSF+++E PVRSAKFIAR+ WVVA  DD +IRVYNY  M+K+  FEAH D
Sbjct: 73   IWNYQSQTMAKSFEVTELPVRSAKFIARKQWVVAGADDMHIRVYNYNTMDKIKVFEAHTD 132

Query: 615  YIRSLAVHPSLPYVVSASDDQVLKLWNWNKGWACHETFEGHSHYVMQVAFNPKDPSTFVS 794
            YIR +AVHP+LPYV+S+SDD ++KLW+W KGWAC + FEGHSHYVMQV FNPKD +TF S
Sbjct: 133  YIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFAS 192

Query: 795  ASLDGTLKIWSLDSSAPDFTLDGHLKGVNCVDYFVSNDKQYLLSGSDDYTAKVWDYCSRN 974
            ASLD T+KIW+L S  P+FTLD H KGVNCVDYF   DK YL++GSDD+TAKVWDY +++
Sbjct: 193  ASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 252

Query: 975  CVQTLEGHENNVTAACAHPELPIIITASEDSTVKIWDAVTFRLHTMLNFGLERGWSIGYK 1154
            CVQTLEGH +NV+A C HPE+PIIIT SED TV+IW + T+RL   LN+GLER W++GY 
Sbjct: 253  CVQTLEGHTHNVSAVCFHPEIPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYM 312

Query: 1155 KGSSQLAFGCDKGFIIVTVNSATCQVKQD*TSKLDYFIRLWKK 1283
            KGS ++  G D+G I+V +         D + K+     +W K
Sbjct: 313  KGSRRVVIGYDEGTIMVKIGREEPVASMDNSGKI-----IWAK 350


>ref|XP_002299635.1| predicted protein [Populus trichocarpa] gi|222846893|gb|EEE84440.1|
            predicted protein [Populus trichocarpa]
          Length = 922

 Score =  434 bits (1115), Expect = e-119
 Identities = 199/323 (61%), Positives = 247/323 (76%)
 Frame = +3

Query: 315  QTLSFEIEHDFVQSSERVKSVDLHPTEPWVLLGLYSGTISIWNYQTKTEEKSFKLSEFPV 494
            Q L  EI+    Q SERVKSVDLHPTEPW+L+ LYSGT+ IWNYQ++T  KSF+++E PV
Sbjct: 1    QPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGTVCIWNYQSQTMAKSFEVTELPV 60

Query: 495  RSAKFIARENWVVAATDDKYIRVYNYEKMEKLVEFEAHKDYIRSLAVHPSLPYVVSASDD 674
            RSAKFIAR+ WVVA  DD +IRVYNY  M+K+  FEAH DYIR +AVHP+LPYV+S+SDD
Sbjct: 61   RSAKFIARKQWVVAGADDMHIRVYNYNTMDKIKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120

Query: 675  QVLKLWNWNKGWACHETFEGHSHYVMQVAFNPKDPSTFVSASLDGTLKIWSLDSSAPDFT 854
             ++KLW+W KGWAC + FEGHSHYVMQV FNPKD +TF SASLD T+KIW+L S  P+FT
Sbjct: 121  MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180

Query: 855  LDGHLKGVNCVDYFVSNDKQYLLSGSDDYTAKVWDYCSRNCVQTLEGHENNVTAACAHPE 1034
            LD H KGVNCVDYF   DK YL++GSDD+TAKVWDY +++CVQTL+GH +NV+A C HPE
Sbjct: 181  LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240

Query: 1035 LPIIITASEDSTVKIWDAVTFRLHTMLNFGLERGWSIGYKKGSSQLAFGCDKGFIIVTVN 1214
            LPIIIT SED TV+IW + T+RL   LN+GLER W++GY KGS ++  G D+G I+V + 
Sbjct: 241  LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRIVIGYDEGTIMVKIG 300

Query: 1215 SATCQVKQD*TSKLDYFIRLWKK 1283
                    D + K+     +W K
Sbjct: 301  REEPVASMDNSGKI-----IWAK 318


>ref|NP_001185203.1| coatomer subunit beta'-2 [Arabidopsis thaliana]
            gi|332194672|gb|AEE32793.1| coatomer subunit beta'-2
            [Arabidopsis thaliana]
          Length = 970

 Score =  432 bits (1112), Expect = e-118
 Identities = 201/323 (62%), Positives = 244/323 (75%)
 Frame = +3

Query: 315  QTLSFEIEHDFVQSSERVKSVDLHPTEPWVLLGLYSGTISIWNYQTKTEEKSFKLSEFPV 494
            + L  EI+    Q SERVKSVDLHPTEPW+L  LYSGT+ IWNYQT+   KSF+++E PV
Sbjct: 45   EPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPV 104

Query: 495  RSAKFIARENWVVAATDDKYIRVYNYEKMEKLVEFEAHKDYIRSLAVHPSLPYVVSASDD 674
            RSAKF+AR+ WVVA  DD YIRVYNY  M+K+  FEAH DYIR +AVHP+LPYV+S+SDD
Sbjct: 105  RSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 164

Query: 675  QVLKLWNWNKGWACHETFEGHSHYVMQVAFNPKDPSTFVSASLDGTLKIWSLDSSAPDFT 854
             ++KLW+W KGWAC + FEGHSHYVMQV FNPKD +TF SASLD T+KIW+L S  P+FT
Sbjct: 165  MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 224

Query: 855  LDGHLKGVNCVDYFVSNDKQYLLSGSDDYTAKVWDYCSRNCVQTLEGHENNVTAACAHPE 1034
            LD H KGVNCVDYF   DK YL++GSDD+TAKVWDY +++CVQTLEGH +NV+A C HPE
Sbjct: 225  LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 284

Query: 1035 LPIIITASEDSTVKIWDAVTFRLHTMLNFGLERGWSIGYKKGSSQLAFGCDKGFIIVTVN 1214
            LPIIIT SED TV+IW A T+RL   LN+GLER W+IGY K S ++  G D+G I+V + 
Sbjct: 285  LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG 344

Query: 1215 SATCQVKQD*TSKLDYFIRLWKK 1283
                    D T K+     +W K
Sbjct: 345  REIPVASMDNTGKI-----IWAK 362


>ref|XP_002891693.1| hypothetical protein ARALYDRAFT_474357 [Arabidopsis lyrata subsp.
            lyrata] gi|297337535|gb|EFH67952.1| hypothetical protein
            ARALYDRAFT_474357 [Arabidopsis lyrata subsp. lyrata]
          Length = 922

 Score =  432 bits (1112), Expect = e-118
 Identities = 202/321 (62%), Positives = 243/321 (75%)
 Frame = +3

Query: 321  LSFEIEHDFVQSSERVKSVDLHPTEPWVLLGLYSGTISIWNYQTKTEEKSFKLSEFPVRS 500
            L  EI+    Q SERVKSVDLHPTEPW+L  LYSGT+ IWNYQT+   KSF+++E PVRS
Sbjct: 3    LRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRS 62

Query: 501  AKFIARENWVVAATDDKYIRVYNYEKMEKLVEFEAHKDYIRSLAVHPSLPYVVSASDDQV 680
            AKFIAR+ WVVA  DD YIRVYNY  M+K+  FEAH DYIR +AVHP+LPYV+S+SDD +
Sbjct: 63   AKFIARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDML 122

Query: 681  LKLWNWNKGWACHETFEGHSHYVMQVAFNPKDPSTFVSASLDGTLKIWSLDSSAPDFTLD 860
            +KLW+W KGWAC + FEGHSHYVMQV FNPKD +TF SASLD T+KIW+L S  P+FTLD
Sbjct: 123  IKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182

Query: 861  GHLKGVNCVDYFVSNDKQYLLSGSDDYTAKVWDYCSRNCVQTLEGHENNVTAACAHPELP 1040
             H KGVNCVDYF   DK YL++GSDD+TAKVWDY +++CVQTLEGH +NV+A C HPELP
Sbjct: 183  AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242

Query: 1041 IIITASEDSTVKIWDAVTFRLHTMLNFGLERGWSIGYKKGSSQLAFGCDKGFIIVTVNSA 1220
            IIIT SED TV+IW A T+RL   LN+GLER W+IGY K S ++  G D+G I+V +   
Sbjct: 243  IIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGRE 302

Query: 1221 TCQVKQD*TSKLDYFIRLWKK 1283
                  D T K+     +W K
Sbjct: 303  IPVASMDNTGKI-----IWAK 318


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