BLASTX nr result

ID: Glycyrrhiza24_contig00005011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00005011
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46219.1| unknown [Medicago truncatula]                          284   3e-74
ref|NP_001241256.1| uncharacterized protein LOC100792250 [Glycin...   283   3e-74
dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus]                       274   2e-71
ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II tra...   268   1e-69
ref|XP_002531587.1| Cofactor required for Sp1 transcriptional ac...   259   7e-67

>gb|AFK46219.1| unknown [Medicago truncatula]
          Length = 168

 Score =  284 bits (726), Expect = 3e-74
 Identities = 146/167 (87%), Positives = 153/167 (91%)
 Frame = -1

Query: 739 MATATXXXXXXXYRLYKDYLQDPKSAXXXXXPIKGTYICFGGNYTTSDILPSLEEQGVRQ 560
           MATAT       YRLYKDY+QDP+SA     PI+GTYICFGG+YTTSD+LPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYVQDPESAPEPPPPIEGTYICFGGSYTTSDVLPSLEEQGVRQ 60

Query: 559 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 380
           LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL
Sbjct: 61  LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 120

Query: 379 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 239
           RPHQARATLIHILELQIERRKQA EDI RRREEAR++LNESLATLDG
Sbjct: 121 RPHQARATLIHILELQIERRKQAAEDINRRREEARRILNESLATLDG 167


>ref|NP_001241256.1| uncharacterized protein LOC100792250 [Glycine max]
           gi|255645739|gb|ACU23363.1| unknown [Glycine max]
          Length = 168

 Score =  283 bits (725), Expect = 3e-74
 Identities = 144/167 (86%), Positives = 153/167 (91%)
 Frame = -1

Query: 739 MATATXXXXXXXYRLYKDYLQDPKSAXXXXXPIKGTYICFGGNYTTSDILPSLEEQGVRQ 560
           MATAT       YRLYKDYLQDP SA     PI+GTY+CFG NYTTSD+LP+LEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYLQDPNSAPDPPPPIEGTYLCFGANYTTSDVLPTLEEQGVRQ 60

Query: 559 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 380
           LYSKGPN+DFKKELRSLNGELQLH+LELADILIERPSQYARRVEEISTVFKNLHHLLNSL
Sbjct: 61  LYSKGPNVDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTVFKNLHHLLNSL 120

Query: 379 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 239
           RPHQARATLIHILELQI+RRKQAVEDIK+RREEAR+LLNESLATLDG
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKKRREEARRLLNESLATLDG 167


>dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus]
          Length = 168

 Score =  274 bits (701), Expect = 2e-71
 Identities = 142/167 (85%), Positives = 148/167 (88%)
 Frame = -1

Query: 739 MATATXXXXXXXYRLYKDYLQDPKSAXXXXXPIKGTYICFGGNYTTSDILPSLEEQGVRQ 560
           MATAT       YRLYKDYLQ+P SA     PI+GTY+CFG NYTTSD+LPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYLQNPDSAPEPPPPIEGTYVCFGANYTTSDVLPSLEEQGVRQ 60

Query: 559 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 380
           LYSKGPNIDFKKELRSLN ELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL
Sbjct: 61  LYSKGPNIDFKKELRSLNAELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 120

Query: 379 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 239
           RPHQARATLIHILELQI+RRKQAVEDIKRRREEAR LL E+L  LDG
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKRRREEARSLLKEALTILDG 167


>ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Cucumis sativus]
          Length = 168

 Score =  268 bits (685), Expect = 1e-69
 Identities = 136/167 (81%), Positives = 148/167 (88%)
 Frame = -1

Query: 739 MATATXXXXXXXYRLYKDYLQDPKSAXXXXXPIKGTYICFGGNYTTSDILPSLEEQGVRQ 560
           MATAT       Y+LYKDYLQDPKSA     PI+GTY+CFG NYTT D+LPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 559 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 380
           LY +GPN+D+KKELRSLN ELQLHILELADIL+ERPSQYARRVEEIS +FKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 379 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 239
           RPHQARATLIHILELQIERR+QAVEDIKRRREEA++LL ESL TLDG
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDG 167


>ref|XP_002531587.1| Cofactor required for Sp1 transcriptional activation subunit,
           putative [Ricinus communis] gi|223528783|gb|EEF30790.1|
           Cofactor required for Sp1 transcriptional activation
           subunit, putative [Ricinus communis]
          Length = 168

 Score =  259 bits (662), Expect = 7e-67
 Identities = 131/167 (78%), Positives = 144/167 (86%)
 Frame = -1

Query: 739 MATATXXXXXXXYRLYKDYLQDPKSAXXXXXPIKGTYICFGGNYTTSDILPSLEEQGVRQ 560
           MATA        YRLYKDY+++PKSA     PI GTY CFG NYTT  +LPSLEEQGVRQ
Sbjct: 1   MATAAYPPPPPYYRLYKDYIENPKSAPEPPPPIDGTYTCFGANYTTEYVLPSLEEQGVRQ 60

Query: 559 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 380
           LY KGPN+DFKKELRSLN ELQLHILEL+D+L+ERPSQYARRVE+IS +FKNLHHLLNSL
Sbjct: 61  LYPKGPNVDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSL 120

Query: 379 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 239
           RPHQARATLIHILELQI+RRKQAVEDIKRRREEA+KLL E+L TLDG
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKEALGTLDG 167


Top