BLASTX nr result

ID: Glycyrrhiza24_contig00004996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004996
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39550.1| unknown [Lotus japonicus]                              130   1e-28
ref|XP_003591645.1| Ethylene-responsive transcription factor RAP...   119   2e-25
ref|XP_003536272.1| PREDICTED: ethylene-responsive transcription...   105   4e-21
ref|XP_003556324.1| PREDICTED: ethylene-responsive transcription...   100   1e-19
gb|ACU23778.1| unknown [Glycine max]                                   99   3e-19

>gb|AFK39550.1| unknown [Lotus japonicus]
          Length = 404

 Score =  130 bits (326), Expect = 1e-28
 Identities = 74/118 (62%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 APSPEKPFWCSKSTPMKEEVPLATMISHTHIPAKFNNHEDMEKGKAKNHPFSGFSSISTP 172
           A SPEK   C  S+ MKEEVPLAT+ISH H PAKFN+ EDME GKAK  P SGF+S +TP
Sbjct: 58  ASSPEKLLSCPDSSSMKEEVPLATLISH-HSPAKFNDPEDMENGKAKKQPLSGFNSTTTP 116

Query: 171 G-VPASDIKHSSIPLNLLENLPALTIXXXXXXXXXXXXXXXXSTPKYPNLTLFLQEPS 1
             VPASDIKHSSIPLNLLE LPAL                  + PK+PNLTLFLQEPS
Sbjct: 117 SFVPASDIKHSSIPLNLLETLPALA---TALVSDDPAASSSSAPPKFPNLTLFLQEPS 171


>ref|XP_003591645.1| Ethylene-responsive transcription factor RAP2-3 [Medicago
           truncatula] gi|355480693|gb|AES61896.1|
           Ethylene-responsive transcription factor RAP2-3
           [Medicago truncatula]
          Length = 403

 Score =  119 bits (299), Expect = 2e-25
 Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
 Frame = -2

Query: 345 SPEKPFWC-SKSTPMKEEVPLATMISHTHIPAKFNNH-EDMEKGKAKNHPFSGFSSISTP 172
           SP+K FWC S ST MK+EVPL T+++   IPAKFN+H +DM+  KA N   S F+SIS P
Sbjct: 43  SPQKLFWCTSNSTSMKQEVPLTTLVNQ--IPAKFNDHHDDMKNMKAINQSISEFNSISNP 100

Query: 171 GVPASDIKHSSIPLNLLENLPALTIXXXXXXXXXXXXXXXXSTPKYPNLTLFLQEPS 1
            V ASDIKHS +PLNLLE LPALT+                +TPK PNLTLFLQEPS
Sbjct: 101 NVLASDIKHSFVPLNLLETLPALTVAPMSDEPAVSLASSTCATPKSPNLTLFLQEPS 157


>ref|XP_003536272.1| PREDICTED: ethylene-responsive transcription factor ERF062-like
           [Glycine max]
          Length = 387

 Score =  105 bits (262), Expect = 4e-21
 Identities = 65/117 (55%), Positives = 71/117 (60%)
 Frame = -2

Query: 351 APSPEKPFWCSKSTPMKEEVPLATMISHTHIPAKFNNHEDMEKGKAKNHPFSGFSSISTP 172
           A SPE  F CS  T MKEE PLAT ISH  IPAKFN H+D++ GK KN   S F      
Sbjct: 38  ASSPENLFSCSNPTSMKEEAPLATWISH--IPAKFNVHQDIKNGKEKNQSNSIF------ 89

Query: 171 GVPASDIKHSSIPLNLLENLPALTIXXXXXXXXXXXXXXXXSTPKYPNLTLFLQEPS 1
             PASD K+SSIPLNLLE LP LTI                + PK+PNLTLFLQEPS
Sbjct: 90  --PASDTKNSSIPLNLLETLPPLTI-APCFDEPVTSLASSSAIPKFPNLTLFLQEPS 143


>ref|XP_003556324.1| PREDICTED: ethylene-responsive transcription factor ERF062-like
           [Glycine max]
          Length = 386

 Score =  100 bits (249), Expect = 1e-19
 Identities = 62/113 (54%), Positives = 67/113 (59%)
 Frame = -2

Query: 339 EKPFWCSKSTPMKEEVPLATMISHTHIPAKFNNHEDMEKGKAKNHPFSGFSSISTPGVPA 160
           EK   CS S  MKEE PLAT ISH  IPAKFN HED++ GK KN   S F        P 
Sbjct: 41  EKLLLCSNSVSMKEEAPLATWISH--IPAKFNGHEDIKNGKEKNQSNSIF--------PV 90

Query: 159 SDIKHSSIPLNLLENLPALTIXXXXXXXXXXXXXXXXSTPKYPNLTLFLQEPS 1
           SDIK+SSIPLNLLE LP LTI                + PK+PNLTLFL EPS
Sbjct: 91  SDIKNSSIPLNLLETLPPLTI-APCFDDPVASLASSSARPKFPNLTLFLPEPS 142


>gb|ACU23778.1| unknown [Glycine max]
          Length = 386

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 62/113 (54%), Positives = 67/113 (59%)
 Frame = -2

Query: 339 EKPFWCSKSTPMKEEVPLATMISHTHIPAKFNNHEDMEKGKAKNHPFSGFSSISTPGVPA 160
           EK   CS S  MKEE PLAT ISH  IPAKFN HED++ GK KN   S F        P 
Sbjct: 41  EKLLLCSNSVSMKEEAPLATWISH--IPAKFNGHEDIKNGKEKNQSNSIF--------PV 90

Query: 159 SDIKHSSIPLNLLENLPALTIXXXXXXXXXXXXXXXXSTPKYPNLTLFLQEPS 1
           SDIK+SSIPLNLLE LP LTI                + PK+PNLTLFL EPS
Sbjct: 91  SDIKNSSIPLNLLEILPPLTI-APCFDDPVASLASSSARPKFPNLTLFLPEPS 142


Top