BLASTX nr result

ID: Glycyrrhiza24_contig00004993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004993
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540480.1| PREDICTED: transcription factor TCP3-like [G...   246   8e-63
ref|XP_003541822.1| PREDICTED: transcription factor TCP3-like [G...   160   1e-36
emb|CAD19990.1| TCP1 protein [Lupinus albus]                          135   3e-29
gb|ADN92994.2| TCP family transcription factor TCP4 [Ipomoea nil]     119   1e-24
ref|NP_001234335.1| cycloidea [Solanum lycopersicum] gi|12002867...   118   3e-24

>ref|XP_003540480.1| PREDICTED: transcription factor TCP3-like [Glycine max]
          Length = 377

 Score =  246 bits (629), Expect = 8e-63
 Identities = 173/345 (50%), Positives = 189/345 (54%), Gaps = 27/345 (7%)
 Frame = -2

Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLAX 1249
            KDRHSKVCTAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA+DWLINKAK AIDQLA 
Sbjct: 27   KDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSAIDQLAH 86

Query: 1248 XXXXXXXXXXXXXXXXXXXXNDDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSGFCFP 1069
                                N +                                    P
Sbjct: 87   LPPWKPTLPAPQNDDESDKLNPNPNPIPIHHPDAEILHQFNENDTENLRCDGGGGSSYLP 146

Query: 1068 FDTDIADTIRCFYPATTSSSPIQFQSYPPDLLSRTSSQDLRLSLQSFQDPILXXXXXXXX 889
             D    D IR F+P TT+SS + FQSYPPDLLSRTSSQDLRLSLQS QDP+L        
Sbjct: 147  MDN---DAIRSFFP-TTTSSLVHFQSYPPDLLSRTSSQDLRLSLQSLQDPVL---LHQNH 199

Query: 888  XXXXXVLFTGT-LDGMLAWNS--------XXXXXXXXXXXXXXXXXXXGFVF----TAXX 748
                 VLF GT  + M+AWNS                           GFVF    T   
Sbjct: 200  HNNEHVLFAGTGFENMVAWNSSSNNNNNTASNDTCGGGGGGGGGGGGGGFVFNAPSTLTG 259

Query: 747  XXXXXXPAVMY----GQNQYLSQRGPLQSSNNPSFRAWIDAPSFV--AADHR---RHCLS 595
                  PAV++    GQ QY +QRGPLQSSN+PS RAWIDAPSFV  AADHR    H LS
Sbjct: 260  PATVASPAVVFGHGLGQGQYFTQRGPLQSSNSPSVRAWIDAPSFVAAAADHRHHHHHYLS 319

Query: 594  PAAAP---VHQSTSPVAEFASR--GFSGFRVPARIQGDHEEEHGG 475
            PAAA    V+QS    A FA+   GFSGFRVPA+IQG  EEEH G
Sbjct: 320  PAAAAAALVYQSAPSTAAFAAAPGGFSGFRVPAQIQG--EEEHDG 362


>ref|XP_003541822.1| PREDICTED: transcription factor TCP3-like [Glycine max]
          Length = 393

 Score =  160 bits (404), Expect = 1e-36
 Identities = 117/234 (50%), Positives = 122/234 (52%), Gaps = 42/234 (17%)
 Frame = -2

Query: 1050 DTIRCFYPATTSSSPIQFQSYPPDLLSRTSSQDLRLSLQSFQDPILXXXXXXXXXXXXXV 871
            D IR F+P TTSS  +QFQSYPPDLLSRTSSQDLRLSLQS QDPIL              
Sbjct: 151  DAIRSFFPTTTSSL-VQFQSYPPDLLSRTSSQDLRLSLQSLQDPILLHHNHNNNEHV--- 206

Query: 870  LFTGT-LDGMLAWN-------------------------SXXXXXXXXXXXXXXXXXXXG 769
            LF GT  D M+AWN                         S                   G
Sbjct: 207  LFAGTAFDNMVAWNNNSNNNHNNNNHNNNNNNNNNNNTASNDTCGGGGGGGGGGGGGGGG 266

Query: 768  FVFTAXXXXXXXXPAVM--------YGQNQYLSQRGPLQSSNNPSFRAWIDAPSFV--AA 619
            FVF A                    YGQ QY SQRGPLQSSN+PS RAWIDAPSFV  AA
Sbjct: 267  FVFNAPSTLPGPATVASPTVVFGHGYGQGQYFSQRGPLQSSNSPSVRAWIDAPSFVAAAA 326

Query: 618  DHR-RHCLSPAAAP---VHQSTSPVAEF--ASRGFSGFRVPARIQGDHEEEHGG 475
            DHR  H LSPAAA    V+QS  P A F  A  GFSGFRVPARIQG  EEEH G
Sbjct: 327  DHRHHHYLSPAAAAAALVYQSAPPTAAFTAAPGGFSGFRVPARIQG--EEEHDG 378



 Score =  117 bits (294), Expect = 6e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)
 Frame = -2

Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLA 1252
            KDRHSKVCTAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA+DWLINKAK +IDQLA
Sbjct: 24   KDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSSIDQLA 82


>emb|CAD19990.1| TCP1 protein [Lupinus albus]
          Length = 407

 Score =  135 bits (339), Expect = 3e-29
 Identities = 98/228 (42%), Positives = 114/228 (50%), Gaps = 23/228 (10%)
 Frame = -2

Query: 1086 SGFCFP-FDTDIADTIRCFYP----ATTSSSPIQFQSYPPDLLSRTSS---------QDL 949
            SGF  P  DTDIADTI+ F+P    A T+++     S PPDLLSRT+S         QDL
Sbjct: 184  SGFLPPSMDTDIADTIKSFFPMVAAAETTTTSFHNYSTPPDLLSRTTSAAANHHNHQQDL 243

Query: 948  RLSLQSFQDPILXXXXXXXXXXXXXVLFTGTLDGMLAWNSXXXXXXXXXXXXXXXXXXXG 769
            RLSLQSFQDP+L                 G    M+AWN+                    
Sbjct: 244  RLSLQSFQDPVLLHHHGEEQEHDH-----GRFHRMVAWNAAIADAANSGHGGG------- 291

Query: 768  FVFTAXXXXXXXXPAVMYGQNQYLSQRGPLQSSNNPSFRAWIDAPSFVAA---------D 616
            FVF +         A+     QY SQRGPLQSSN PS RAWID  SF AA          
Sbjct: 292  FVFNSPPPSTVAPAAMFGHHGQYFSQRGPLQSSNTPSIRAWIDPNSFAAAATVAAASHPH 351

Query: 615  HRRHCLSPAAAPVHQSTSPVAEFASRGFSGFRVPARIQGDHEEEHGGV 472
            +  H LSPA   +HQ++       S GFSGFR+PARIQG  EEEH GV
Sbjct: 352  YHHHYLSPA---IHQASVSGFATPSSGFSGFRIPARIQG--EEEHDGV 394



 Score =  116 bits (291), Expect = 1e-23
 Identities = 55/59 (93%), Positives = 57/59 (96%)
 Frame = -2

Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLA 1252
            KDRHSKVCTAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA+DWLI KAK AIDQLA
Sbjct: 41   KDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDQLA 99


>gb|ADN92994.2| TCP family transcription factor TCP4 [Ipomoea nil]
          Length = 400

 Score =  119 bits (299), Expect = 1e-24
 Identities = 55/59 (93%), Positives = 59/59 (100%)
 Frame = -2

Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLA 1252
            KDRHSKVCTAKGPRDRRVRL+AHTAI+FYDVQDRLGYDRPSKA+DWLINKAKPAID+LA
Sbjct: 39   KDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKPAIDELA 97



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
 Frame = -2

Query: 714 GQNQYL-SQRGPLQSSNNPSFRAWIDAPSFVAADHRRHCLSPAAAPVHQSTSPVAEFAS- 541
           GQNQ+  SQRGPLQSS +PS RAWID    +A             P++ S+     F++ 
Sbjct: 305 GQNQFFPSQRGPLQSSYSPSVRAWIDPSPAIAIASVDPNQQHYQLPIYPSSLSGIGFSTG 364

Query: 540 -RGFSGFRVPARIQGDHEEEHGGV 472
              FSGFR+PARIQG+ EEEH G+
Sbjct: 365 VGEFSGFRIPARIQGE-EEEHDGI 387


>ref|NP_001234335.1| cycloidea [Solanum lycopersicum] gi|12002867|gb|AAG43412.1| cycloidea
            [Solanum lycopersicum]
          Length = 396

 Score =  118 bits (296), Expect = 3e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)
 Frame = -2

Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLA 1252
            KDRHSKVCTAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA+DWLI KAKPAID+LA
Sbjct: 143  KDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKPAIDELA 201


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