BLASTX nr result
ID: Glycyrrhiza24_contig00004993
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00004993 (1429 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540480.1| PREDICTED: transcription factor TCP3-like [G... 246 8e-63 ref|XP_003541822.1| PREDICTED: transcription factor TCP3-like [G... 160 1e-36 emb|CAD19990.1| TCP1 protein [Lupinus albus] 135 3e-29 gb|ADN92994.2| TCP family transcription factor TCP4 [Ipomoea nil] 119 1e-24 ref|NP_001234335.1| cycloidea [Solanum lycopersicum] gi|12002867... 118 3e-24 >ref|XP_003540480.1| PREDICTED: transcription factor TCP3-like [Glycine max] Length = 377 Score = 246 bits (629), Expect = 8e-63 Identities = 173/345 (50%), Positives = 189/345 (54%), Gaps = 27/345 (7%) Frame = -2 Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLAX 1249 KDRHSKVCTAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA+DWLINKAK AIDQLA Sbjct: 27 KDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSAIDQLAH 86 Query: 1248 XXXXXXXXXXXXXXXXXXXXNDDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSGFCFP 1069 N + P Sbjct: 87 LPPWKPTLPAPQNDDESDKLNPNPNPIPIHHPDAEILHQFNENDTENLRCDGGGGSSYLP 146 Query: 1068 FDTDIADTIRCFYPATTSSSPIQFQSYPPDLLSRTSSQDLRLSLQSFQDPILXXXXXXXX 889 D D IR F+P TT+SS + FQSYPPDLLSRTSSQDLRLSLQS QDP+L Sbjct: 147 MDN---DAIRSFFP-TTTSSLVHFQSYPPDLLSRTSSQDLRLSLQSLQDPVL---LHQNH 199 Query: 888 XXXXXVLFTGT-LDGMLAWNS--------XXXXXXXXXXXXXXXXXXXGFVF----TAXX 748 VLF GT + M+AWNS GFVF T Sbjct: 200 HNNEHVLFAGTGFENMVAWNSSSNNNNNTASNDTCGGGGGGGGGGGGGGFVFNAPSTLTG 259 Query: 747 XXXXXXPAVMY----GQNQYLSQRGPLQSSNNPSFRAWIDAPSFV--AADHR---RHCLS 595 PAV++ GQ QY +QRGPLQSSN+PS RAWIDAPSFV AADHR H LS Sbjct: 260 PATVASPAVVFGHGLGQGQYFTQRGPLQSSNSPSVRAWIDAPSFVAAAADHRHHHHHYLS 319 Query: 594 PAAAP---VHQSTSPVAEFASR--GFSGFRVPARIQGDHEEEHGG 475 PAAA V+QS A FA+ GFSGFRVPA+IQG EEEH G Sbjct: 320 PAAAAAALVYQSAPSTAAFAAAPGGFSGFRVPAQIQG--EEEHDG 362 >ref|XP_003541822.1| PREDICTED: transcription factor TCP3-like [Glycine max] Length = 393 Score = 160 bits (404), Expect = 1e-36 Identities = 117/234 (50%), Positives = 122/234 (52%), Gaps = 42/234 (17%) Frame = -2 Query: 1050 DTIRCFYPATTSSSPIQFQSYPPDLLSRTSSQDLRLSLQSFQDPILXXXXXXXXXXXXXV 871 D IR F+P TTSS +QFQSYPPDLLSRTSSQDLRLSLQS QDPIL Sbjct: 151 DAIRSFFPTTTSSL-VQFQSYPPDLLSRTSSQDLRLSLQSLQDPILLHHNHNNNEHV--- 206 Query: 870 LFTGT-LDGMLAWN-------------------------SXXXXXXXXXXXXXXXXXXXG 769 LF GT D M+AWN S G Sbjct: 207 LFAGTAFDNMVAWNNNSNNNHNNNNHNNNNNNNNNNNTASNDTCGGGGGGGGGGGGGGGG 266 Query: 768 FVFTAXXXXXXXXPAVM--------YGQNQYLSQRGPLQSSNNPSFRAWIDAPSFV--AA 619 FVF A YGQ QY SQRGPLQSSN+PS RAWIDAPSFV AA Sbjct: 267 FVFNAPSTLPGPATVASPTVVFGHGYGQGQYFSQRGPLQSSNSPSVRAWIDAPSFVAAAA 326 Query: 618 DHR-RHCLSPAAAP---VHQSTSPVAEF--ASRGFSGFRVPARIQGDHEEEHGG 475 DHR H LSPAAA V+QS P A F A GFSGFRVPARIQG EEEH G Sbjct: 327 DHRHHHYLSPAAAAAALVYQSAPPTAAFTAAPGGFSGFRVPARIQG--EEEHDG 378 Score = 117 bits (294), Expect = 6e-24 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = -2 Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLA 1252 KDRHSKVCTAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA+DWLINKAK +IDQLA Sbjct: 24 KDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSSIDQLA 82 >emb|CAD19990.1| TCP1 protein [Lupinus albus] Length = 407 Score = 135 bits (339), Expect = 3e-29 Identities = 98/228 (42%), Positives = 114/228 (50%), Gaps = 23/228 (10%) Frame = -2 Query: 1086 SGFCFP-FDTDIADTIRCFYP----ATTSSSPIQFQSYPPDLLSRTSS---------QDL 949 SGF P DTDIADTI+ F+P A T+++ S PPDLLSRT+S QDL Sbjct: 184 SGFLPPSMDTDIADTIKSFFPMVAAAETTTTSFHNYSTPPDLLSRTTSAAANHHNHQQDL 243 Query: 948 RLSLQSFQDPILXXXXXXXXXXXXXVLFTGTLDGMLAWNSXXXXXXXXXXXXXXXXXXXG 769 RLSLQSFQDP+L G M+AWN+ Sbjct: 244 RLSLQSFQDPVLLHHHGEEQEHDH-----GRFHRMVAWNAAIADAANSGHGGG------- 291 Query: 768 FVFTAXXXXXXXXPAVMYGQNQYLSQRGPLQSSNNPSFRAWIDAPSFVAA---------D 616 FVF + A+ QY SQRGPLQSSN PS RAWID SF AA Sbjct: 292 FVFNSPPPSTVAPAAMFGHHGQYFSQRGPLQSSNTPSIRAWIDPNSFAAAATVAAASHPH 351 Query: 615 HRRHCLSPAAAPVHQSTSPVAEFASRGFSGFRVPARIQGDHEEEHGGV 472 + H LSPA +HQ++ S GFSGFR+PARIQG EEEH GV Sbjct: 352 YHHHYLSPA---IHQASVSGFATPSSGFSGFRIPARIQG--EEEHDGV 394 Score = 116 bits (291), Expect = 1e-23 Identities = 55/59 (93%), Positives = 57/59 (96%) Frame = -2 Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLA 1252 KDRHSKVCTAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA+DWLI KAK AIDQLA Sbjct: 41 KDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDQLA 99 >gb|ADN92994.2| TCP family transcription factor TCP4 [Ipomoea nil] Length = 400 Score = 119 bits (299), Expect = 1e-24 Identities = 55/59 (93%), Positives = 59/59 (100%) Frame = -2 Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLA 1252 KDRHSKVCTAKGPRDRRVRL+AHTAI+FYDVQDRLGYDRPSKA+DWLINKAKPAID+LA Sbjct: 39 KDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKPAIDELA 97 Score = 64.7 bits (156), Expect = 6e-08 Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 3/84 (3%) Frame = -2 Query: 714 GQNQYL-SQRGPLQSSNNPSFRAWIDAPSFVAADHRRHCLSPAAAPVHQSTSPVAEFAS- 541 GQNQ+ SQRGPLQSS +PS RAWID +A P++ S+ F++ Sbjct: 305 GQNQFFPSQRGPLQSSYSPSVRAWIDPSPAIAIASVDPNQQHYQLPIYPSSLSGIGFSTG 364 Query: 540 -RGFSGFRVPARIQGDHEEEHGGV 472 FSGFR+PARIQG+ EEEH G+ Sbjct: 365 VGEFSGFRIPARIQGE-EEEHDGI 387 >ref|NP_001234335.1| cycloidea [Solanum lycopersicum] gi|12002867|gb|AAG43412.1| cycloidea [Solanum lycopersicum] Length = 396 Score = 118 bits (296), Expect = 3e-24 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = -2 Query: 1428 KDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKALDWLINKAKPAIDQLA 1252 KDRHSKVCTAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA+DWLI KAKPAID+LA Sbjct: 143 KDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKPAIDELA 201