BLASTX nr result

ID: Glycyrrhiza24_contig00004965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004965
         (1453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   565   e-158
dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]                          558   e-156
ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|2...   556   e-156
ref|XP_003519077.1| PREDICTED: transcription initiation factor I...   555   e-155
ref|XP_002534470.1| transcription initiation factor iib, putativ...   554   e-155

>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
            sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
            transcription initiation factor IIB-2-like [Cucumis
            sativus]
          Length = 312

 Score =  565 bits (1456), Expect = e-158
 Identities = 283/312 (90%), Positives = 285/312 (91%)
 Frame = +1

Query: 202  MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 381
            MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 382  GPTNPLLTDGGLSTVIAKPNXXXXXXXXXXXXRWQNRGSNPDRGLILAFKTIATMSDRLG 561
            GPTNPLL DGGLSTVIAKPN            RWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 562  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 741
            LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 742  KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSEEF 921
            KEIGRAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGMNN            SEEF
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 922  DIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWY 1101
            DIRRSPISIAAAVIYIITQLSDDKKPLKDIS+ATGVAEGTIRNSYKDLYPHVSKI+P WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKILPGWY 300

Query: 1102 AKEEDLKNLCSP 1137
            AKEEDLKNLCSP
Sbjct: 301  AKEEDLKNLCSP 312


>dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]
          Length = 312

 Score =  558 bits (1437), Expect = e-156
 Identities = 279/312 (89%), Positives = 283/312 (90%)
 Frame = +1

Query: 202  MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 381
            M DAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1    MGDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 382  GPTNPLLTDGGLSTVIAKPNXXXXXXXXXXXXRWQNRGSNPDRGLILAFKTIATMSDRLG 561
            GPTNPLL DGGLSTVIAKPN            RWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 562  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 741
            LVATIKDRANEIYK+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 742  KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSEEF 921
            KEIGRAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGMNN            SEEF
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEF 240

Query: 922  DIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWY 1101
            DIRRSPISIAAAVIYII+QLSDDKKPL++IS ATGVAEGTIRNSYKDLYPHVSKIIP WY
Sbjct: 241  DIRRSPISIAAAVIYIISQLSDDKKPLREISQATGVAEGTIRNSYKDLYPHVSKIIPGWY 300

Query: 1102 AKEEDLKNLCSP 1137
            AKEEDLKNLCSP
Sbjct: 301  AKEEDLKNLCSP 312


>ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|222867352|gb|EEF04483.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score =  556 bits (1434), Expect = e-156
 Identities = 278/312 (89%), Positives = 283/312 (90%)
 Frame = +1

Query: 202  MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 381
            M DAFCSDCKR TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1    MGDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 382  GPTNPLLTDGGLSTVIAKPNXXXXXXXXXXXXRWQNRGSNPDRGLILAFKTIATMSDRLG 561
            GPTNPLLTDGGLSTVIAKPN            RWQNRGSNPDRGLI AFKTIATMSDRLG
Sbjct: 61   GPTNPLLTDGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLITAFKTIATMSDRLG 120

Query: 562  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 741
            LVATIKDRANEIYK+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 742  KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSEEF 921
            KEIGRAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGM+N            SE+F
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQF 240

Query: 922  DIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWY 1101
            DIRRSPISIAAAVIYIITQLSDDKKPL+DISLATGVAEGTIRNSYKDLYPHVSKIIP+WY
Sbjct: 241  DIRRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPSWY 300

Query: 1102 AKEEDLKNLCSP 1137
            A EEDLKNLCSP
Sbjct: 301  ASEEDLKNLCSP 312


>ref|XP_003519077.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 314

 Score =  555 bits (1429), Expect = e-155
 Identities = 281/314 (89%), Positives = 284/314 (90%), Gaps = 2/314 (0%)
 Frame = +1

Query: 202  MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 381
            MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDP RVG
Sbjct: 1    MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 382  GPTNPLLTDGGLSTVIAKPNXXXXXXXXXXXX--RWQNRGSNPDRGLILAFKTIATMSDR 555
            GP+NPLLTDGGLSTVIAKPN              RWQNRGSNPDR LI+AFKTIATMSDR
Sbjct: 61   GPSNPLLTDGGLSTVIAKPNGGGGGGEFLSSSLGRWQNRGSNPDRALIIAFKTIATMSDR 120

Query: 556  LGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 735
            LGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA
Sbjct: 121  LGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 180

Query: 736  TKKEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSE 915
            TKKEIGRAKEYIVKQLGLENG +VEMGTIHAGDFMRRFCSNL MNN            SE
Sbjct: 181  TKKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVHKSE 240

Query: 916  EFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPN 1095
            EFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPN
Sbjct: 241  EFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPN 300

Query: 1096 WYAKEEDLKNLCSP 1137
            WYAKEEDLKNLCSP
Sbjct: 301  WYAKEEDLKNLCSP 314


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
            gi|223525233|gb|EEF27913.1| transcription initiation
            factor iib, putative [Ricinus communis]
          Length = 312

 Score =  554 bits (1428), Expect = e-155
 Identities = 278/312 (89%), Positives = 283/312 (90%)
 Frame = +1

Query: 202  MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 381
            M DA+CSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1    MGDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 382  GPTNPLLTDGGLSTVIAKPNXXXXXXXXXXXXRWQNRGSNPDRGLILAFKTIATMSDRLG 561
            GPTNPLL DGGLSTVIAKPN            RWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61   GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 562  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 741
            LVATIKDRANEIYK+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121  LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 742  KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSEEF 921
            KEIGRAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGMNN            SEEF
Sbjct: 181  KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEF 240

Query: 922  DIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWY 1101
            DIRRSPISIAAAVIYII+QLSDDKK L+DIS ATGVAEGTIRNSYKDLYPHVSKIIP+WY
Sbjct: 241  DIRRSPISIAAAVIYIISQLSDDKKLLRDISHATGVAEGTIRNSYKDLYPHVSKIIPSWY 300

Query: 1102 AKEEDLKNLCSP 1137
            AKEEDLKNLCSP
Sbjct: 301  AKEEDLKNLCSP 312


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