BLASTX nr result

ID: Glycyrrhiza24_contig00004952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004952
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602457.1| 60S ribosomal protein L6 [Medicago truncatul...   359   6e-97
ref|XP_003602484.1| 60S ribosomal protein L6 [Medicago truncatul...   356   4e-96
gb|AFK35906.1| unknown [Lotus japonicus]                              352   6e-95
ref|XP_003531428.1| PREDICTED: 60S ribosomal protein L6-like [Gl...   352   1e-94
ref|XP_003531382.1| PREDICTED: 60S ribosomal protein L6-like [Gl...   352   1e-94

>ref|XP_003602457.1| 60S ribosomal protein L6 [Medicago truncatula]
           gi|355491505|gb|AES72708.1| 60S ribosomal protein L6
           [Medicago truncatula]
          Length = 233

 Score =  359 bits (921), Expect = 6e-97
 Identities = 183/233 (78%), Positives = 195/233 (83%)
 Frame = -3

Query: 966 MAPKQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXXX 787
           MAPKQR ARVSRNPELIRGIGKYS+S MYHKRG+WAIKAK+GG  PRHD           
Sbjct: 1   MAPKQRTARVSRNPELIRGIGKYSRSAMYHKRGLWAIKAKHGGAFPRHDPVAKPAAPVEK 60

Query: 786 XXKFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 607
             KFYPADDVKKP+RNKH+PKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  PPKFYPADDVKKPLRNKHRPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 120

Query: 606 TGPFKINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFSKEVQXXXXXXXXXXXXXX 427
           TGPFKINGVPLRRVNQ+YVIGTSTKVD+S+VNVDKFDDKYFSKE Q              
Sbjct: 121 TGPFKINGVPLRRVNQAYVIGTSTKVDISSVNVDKFDDKYFSKESQKKTKKGESEFFEAD 180

Query: 426 XXXKNVLPQEKKDDQKTVDSALLKAIESVPELKPYLGARFSLKAGMKPHELVF 268
              K VLPQEKKDDQKTVD+ LLKAI+SVP+LK YLGARFSLKAG+KPHELVF
Sbjct: 181 KEDKKVLPQEKKDDQKTVDAGLLKAIDSVPDLKTYLGARFSLKAGVKPHELVF 233


>ref|XP_003602484.1| 60S ribosomal protein L6 [Medicago truncatula]
           gi|217071394|gb|ACJ84057.1| unknown [Medicago
           truncatula] gi|217071824|gb|ACJ84272.1| unknown
           [Medicago truncatula] gi|355491532|gb|AES72735.1| 60S
           ribosomal protein L6 [Medicago truncatula]
           gi|388498428|gb|AFK37280.1| unknown [Medicago
           truncatula]
          Length = 233

 Score =  356 bits (914), Expect = 4e-96
 Identities = 182/233 (78%), Positives = 193/233 (82%)
 Frame = -3

Query: 966 MAPKQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXXX 787
           MAPK R ARVSRNPELIRGIGKYS+S MYHKRG+WAIKAK+GG  PRHD           
Sbjct: 1   MAPKTRTARVSRNPELIRGIGKYSRSAMYHKRGLWAIKAKHGGAFPRHDPVAKPAAPVEK 60

Query: 786 XXKFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 607
             KFYPADDVKKP+RNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  PPKFYPADDVKKPLRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 120

Query: 606 TGPFKINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFSKEVQXXXXXXXXXXXXXX 427
           TGPFKINGVPLRRVNQ+YVIGTSTKVD+S+VN DKFDDKYFSKE Q              
Sbjct: 121 TGPFKINGVPLRRVNQAYVIGTSTKVDISSVNADKFDDKYFSKESQKKTKKGEGEFFEAD 180

Query: 426 XXXKNVLPQEKKDDQKTVDSALLKAIESVPELKPYLGARFSLKAGMKPHELVF 268
              K VLPQEKKDDQKTVD+ LLKAI+SVP+LK YLGARFSLKAG+KPHELVF
Sbjct: 181 KEDKKVLPQEKKDDQKTVDAGLLKAIDSVPDLKTYLGARFSLKAGVKPHELVF 233


>gb|AFK35906.1| unknown [Lotus japonicus]
          Length = 233

 Score =  352 bits (904), Expect = 6e-95
 Identities = 180/233 (77%), Positives = 190/233 (81%)
 Frame = -3

Query: 966 MAPKQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXXX 787
           MA KQR  RV+RNP+LIRGIGKYSKSQMYHKRGIWA+KAKNGG  P HD           
Sbjct: 1   MAAKQRTKRVTRNPDLIRGIGKYSKSQMYHKRGIWALKAKNGGAFPHHDPKPKPEAPAVK 60

Query: 786 XXKFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 607
             KFYPADDVKKP+ NKHKP+PTKLRASITPGTVLILL GRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  APKFYPADDVKKPLLNKHKPRPTKLRASITPGTVLILLVGRFKGKRVVFLKQLPSGLLLV 120

Query: 606 TGPFKINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFSKEVQXXXXXXXXXXXXXX 427
           TGP+KINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFSKE Q              
Sbjct: 121 TGPYKINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFSKEAQKKKKKGEGEFFEAE 180

Query: 426 XXXKNVLPQEKKDDQKTVDSALLKAIESVPELKPYLGARFSLKAGMKPHELVF 268
              KN LPQEKKDDQKTVDS+L+ AIE VPELK YLGARFSLK+GMKPHEL+F
Sbjct: 181 KEEKNALPQEKKDDQKTVDSSLITAIEGVPELKAYLGARFSLKSGMKPHELLF 233


>ref|XP_003531428.1| PREDICTED: 60S ribosomal protein L6-like [Glycine max]
          Length = 232

 Score =  352 bits (902), Expect = 1e-94
 Identities = 183/233 (78%), Positives = 193/233 (82%)
 Frame = -3

Query: 966 MAPKQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXXX 787
           MAPK+ R   SRNP+L+RGIGKYS+SQMYHKRGIWAIKAKNGGVLP HD           
Sbjct: 1   MAPKKPRT-TSRNPDLVRGIGKYSRSQMYHKRGIWAIKAKNGGVLPLHDPKPKPEAPAQK 59

Query: 786 XXKFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 607
             KFYPADDVKKP+ NKHKPKP KLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV
Sbjct: 60  PPKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 119

Query: 606 TGPFKINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFSKEVQXXXXXXXXXXXXXX 427
           TGPFKINGVPLRRVNQSYVIGTSTKVD+S VNVDKFDDKYF+KE +              
Sbjct: 120 TGPFKINGVPLRRVNQSYVIGTSTKVDISDVNVDKFDDKYFAKEAKKKKTKGEGEFFEAE 179

Query: 426 XXXKNVLPQEKKDDQKTVDSALLKAIESVPELKPYLGARFSLKAGMKPHELVF 268
              KNVLPQEKKDDQKTVD+ALLKAIESVPELK YLGARFSLKAG+KPHELVF
Sbjct: 180 KEEKNVLPQEKKDDQKTVDTALLKAIESVPELKSYLGARFSLKAGVKPHELVF 232


>ref|XP_003531382.1| PREDICTED: 60S ribosomal protein L6-like [Glycine max]
          Length = 232

 Score =  352 bits (902), Expect = 1e-94
 Identities = 183/233 (78%), Positives = 195/233 (83%)
 Frame = -3

Query: 966 MAPKQRRARVSRNPELIRGIGKYSKSQMYHKRGIWAIKAKNGGVLPRHDXXXXXXXXXXX 787
           MAPK  R +VSRNPELIRGIGKYS+SQMYHKRGIWAIKAKNGGVLPRHD           
Sbjct: 1   MAPKITR-KVSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVLPRHDPKPKPETPTEK 59

Query: 786 XXKFYPADDVKKPIRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 607
             KFYPADDVKKP+ NKHKPKP KLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV
Sbjct: 60  PPKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLV 119

Query: 606 TGPFKINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFSKEVQXXXXXXXXXXXXXX 427
           TGPFK+NGVPLRRVNQ+YVIGTSTKVDVSAVNV+ FDDKYF+KE Q              
Sbjct: 120 TGPFKVNGVPLRRVNQAYVIGTSTKVDVSAVNVNNFDDKYFAKEAQRKKKKGEGEFFEAE 179

Query: 426 XXXKNVLPQEKKDDQKTVDSALLKAIESVPELKPYLGARFSLKAGMKPHELVF 268
              K+VLPQ+KKDDQKTVD+ALLKAIESVP+LK YLGARFSLKAG+KPHELVF
Sbjct: 180 KEEKSVLPQQKKDDQKTVDAALLKAIESVPDLKSYLGARFSLKAGVKPHELVF 232


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