BLASTX nr result

ID: Glycyrrhiza24_contig00004944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004944
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote...   367   2e-99
ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicag...   365   9e-99
gb|AFK40642.1| unknown [Lotus japonicus]                              363   3e-98
gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]      355   9e-96
ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycin...   353   3e-95

>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Glycine max]
          Length = 217

 Score =  367 bits (943), Expect = 2e-99
 Identities = 178/217 (82%), Positives = 192/217 (88%)
 Frame = +3

Query: 60  MNSVAVRLAKHLRVSSLISSSHAGVPRSGTIWYSTLLSESDVDQPSSDKDGPTNEELDEE 239
           MNS+AVRLAKHLR+S+L S S  GVPRSG  WYST LS  + D P  D D P  E LDEE
Sbjct: 1   MNSMAVRLAKHLRLSALTSFSLGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEALDEE 60

Query: 240 IDDFLGSKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG 419
            DDFLG KPELQLQGVDPK+GWGFRGVHKAIICGKVGQAPVQKILRNG+N+TIFTVGTGG
Sbjct: 61  FDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTVGTGG 120

Query: 420 MYDQRIVGAKDLPKPAQWHRIAVHNDVLGAYAVQQIFKNSSVYVEGEIETRVYNDSINGE 599
           M+DQRI G KDLPKPAQWHRIAVHND+LG YAVQQ+FKNSSVYVEG+IETRVYNDSING 
Sbjct: 121 MFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGN 180

Query: 600 VKSIPEICVRRDGKIRLIKSGESVDKISLDELREGLF 710
           VKSIPEICVRRDG+IRLIK+GES+DK SLDELREGLF
Sbjct: 181 VKSIPEICVRRDGRIRLIKNGESIDKTSLDELREGLF 217


>ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355480238|gb|AES61441.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
           gi|388493454|gb|AFK34793.1| unknown [Medicago
           truncatula]
          Length = 212

 Score =  365 bits (937), Expect = 9e-99
 Identities = 181/217 (83%), Positives = 193/217 (88%)
 Frame = +3

Query: 60  MNSVAVRLAKHLRVSSLISSSHAGVPRSGTIWYSTLLSESDVDQPSSDKDGPTNEELDEE 239
           MNSVA+RL+KHLR      SSHA VPRS  + YST  SE+D  QPS D +G   EELD+E
Sbjct: 1   MNSVALRLSKHLR-----RSSHASVPRSTVLCYSTFTSETDAGQPSRDNNGLNKEELDDE 55

Query: 240 IDDFLGSKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG 419
            DDFLG +PELQLQGVDP RGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG
Sbjct: 56  FDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG 115

Query: 420 MYDQRIVGAKDLPKPAQWHRIAVHNDVLGAYAVQQIFKNSSVYVEGEIETRVYNDSINGE 599
           MYDQRIVG+KDLPKPAQWHRIAVHN+VLGAYAVQQ+FKNSSVYVEGEIETRVYNDSINGE
Sbjct: 116 MYDQRIVGSKDLPKPAQWHRIAVHNEVLGAYAVQQLFKNSSVYVEGEIETRVYNDSINGE 175

Query: 600 VKSIPEICVRRDGKIRLIKSGESVDKISLDELREGLF 710
           VKSIPEICVRRDGK+RLI+SGESVDK SLDE REGLF
Sbjct: 176 VKSIPEICVRRDGKLRLIRSGESVDKTSLDEFREGLF 212


>gb|AFK40642.1| unknown [Lotus japonicus]
          Length = 220

 Score =  363 bits (933), Expect = 3e-98
 Identities = 183/220 (83%), Positives = 193/220 (87%), Gaps = 3/220 (1%)
 Frame = +3

Query: 60  MNSVAVRLAKHLRVSSLISSSHAGVPRS---GTIWYSTLLSESDVDQPSSDKDGPTNEEL 230
           MNS+AVR+AKHLR++S +  +  GV R       WYST LSE + DQPS    G  NEEL
Sbjct: 1   MNSIAVRVAKHLRITSNVGVAGGGVWRRHGPAASWYSTFLSEGEGDQPSRGNGGLNNEEL 60

Query: 231 DEEIDDFLGSKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVG 410
           DEEIDDFLG KPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVG
Sbjct: 61  DEEIDDFLGGKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVG 120

Query: 411 TGGMYDQRIVGAKDLPKPAQWHRIAVHNDVLGAYAVQQIFKNSSVYVEGEIETRVYNDSI 590
           TGGM DQRIVGA+D+PKP QWHRIAVHNDVLGAYAVQQI KNSSVYVEG+IETRVYNDSI
Sbjct: 121 TGGMSDQRIVGARDMPKPPQWHRIAVHNDVLGAYAVQQICKNSSVYVEGDIETRVYNDSI 180

Query: 591 NGEVKSIPEICVRRDGKIRLIKSGESVDKISLDELREGLF 710
           NGEVKSIPEICVRRDGKIRLIKSGES DKISLDELREGLF
Sbjct: 181 NGEVKSIPEICVRRDGKIRLIKSGESADKISLDELREGLF 220


>gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]
          Length = 216

 Score =  355 bits (911), Expect = 9e-96
 Identities = 176/211 (83%), Positives = 188/211 (89%)
 Frame = +3

Query: 60  MNSVAVRLAKHLRVSSLISSSHAGVPRSGTIWYSTLLSESDVDQPSSDKDGPTNEELDEE 239
           MNSVA+RL+KHLR      SSHA VPRS  + YST  SE+D  QPS D +G   EELD+E
Sbjct: 1   MNSVALRLSKHLR-----RSSHASVPRSTVLCYSTFTSETDAGQPSRDNNGLNKEELDDE 55

Query: 240 IDDFLGSKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG 419
            DDFLG +PELQLQGVDP RGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG
Sbjct: 56  FDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG 115

Query: 420 MYDQRIVGAKDLPKPAQWHRIAVHNDVLGAYAVQQIFKNSSVYVEGEIETRVYNDSINGE 599
           MYDQRIVG+KDLPKPAQWHRIAVHN+VLGAYAVQQ+FKNSSVYVEGEIETRVYNDSINGE
Sbjct: 116 MYDQRIVGSKDLPKPAQWHRIAVHNEVLGAYAVQQLFKNSSVYVEGEIETRVYNDSINGE 175

Query: 600 VKSIPEICVRRDGKIRLIKSGESVDKISLDE 692
           VKSIPEICVRRDGK+RLI+SGESVDK SLDE
Sbjct: 176 VKSIPEICVRRDGKLRLIRSGESVDKTSLDE 206


>ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycine max]
           gi|255627623|gb|ACU14156.1| unknown [Glycine max]
          Length = 236

 Score =  353 bits (907), Expect = 3e-95
 Identities = 177/226 (78%), Positives = 194/226 (85%)
 Frame = +3

Query: 60  MNSVAVRLAKHLRVSSLISSSHAGVPRSGTIWYSTLLSESDVDQPSSDKDGPTNEELDEE 239
           MNS+AVRL KHL++S+  SSS  GVPRSG  WYST LS  +  QPS D   P NE LD E
Sbjct: 1   MNSMAVRLVKHLQLSAPTSSSFGGVPRSGASWYSTSLSGGEY-QPSQDNVAPKNEALDGE 59

Query: 240 IDDFLGSKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGG 419
           +DDFLG K ELQLQGVDPK+GWGFRGVHKAIICGKVGQAPVQKILRNG+N+TIFTVGTGG
Sbjct: 60  LDDFLGEKAELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVGTGG 119

Query: 420 MYDQRIVGAKDLPKPAQWHRIAVHNDVLGAYAVQQIFKNSSVYVEGEIETRVYNDSINGE 599
           M+DQRI G KDLPKPAQWHRIAVHND+LGAYAVQ++FKNSSVYVEG+IE RVYNDSINGE
Sbjct: 120 MFDQRIQGPKDLPKPAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSINGE 179

Query: 600 VKSIPEICVRRDGKIRLIKSGESVDKISLDELREGLF*KKAAHLME 737
           VKSIPEICVRRDGKI LIKSGES+DK SLDELRE +   K+ HL E
Sbjct: 180 VKSIPEICVRRDGKICLIKSGESIDKTSLDELRERVVLGKSDHLTE 225


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