BLASTX nr result

ID: Glycyrrhiza24_contig00004941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004941
         (1389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607043.1| Signal recognition particle receptor subunit...   424   e-116
gb|ACJ84671.1| unknown [Medicago truncatula]                          423   e-116
gb|AFK37552.1| unknown [Medicago truncatula]                          420   e-115
gb|AFK36205.1| unknown [Lotus japonicus]                              409   e-112
ref|XP_003519824.1| PREDICTED: signal recognition particle recep...   402   e-109

>ref|XP_003607043.1| Signal recognition particle receptor subunit beta [Medicago
            truncatula] gi|355508098|gb|AES89240.1| Signal
            recognition particle receptor subunit beta [Medicago
            truncatula]
          Length = 260

 Score =  424 bits (1091), Expect = e-116
 Identities = 217/259 (83%), Positives = 222/259 (85%)
 Frame = -3

Query: 1195 MQQEMEQWKEQASHLWLVATDYLREVPPNQXXXXXXXXXXXXXXXXXXXXXXRAKSNTIV 1016
            MQ E+EQWKEQ SHLW VA DYLR+VPPNQ                      R KSNTIV
Sbjct: 1    MQHELEQWKEQFSHLWNVANDYLRDVPPNQLYAAAAIAIFTTLLLLFLRVLKRTKSNTIV 60

Query: 1015 LTGLSGSGKTVLFYQLKDGSTHQGTVTSMEPNEGTFILHGETTKKGKIKPVHIVDVPGHS 836
            LTGLSGSGKTVLFYQL+DGSTHQGTVTSMEPNEGTFILHGET KKGKIKPVHIVDVPGHS
Sbjct: 61   LTGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHS 120

Query: 835  RLRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD 656
            RLRPKLDE+LPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD
Sbjct: 121  RLRPKLDEFLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD 180

Query: 655  KVTAHTKEFIRRQLEKEIDKLXXXXXXXXXADVTNEFTLGVPGEPFSFTQCSNKVTTADA 476
            KVTAHTKEFIRRQ+EKEIDKL         ADVTNEFTLGVPGEPFSFTQCSNKVTTADA
Sbjct: 181  KVTAHTKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTTADA 240

Query: 475  SGLTGEISQLQEFIREYVK 419
            SGLTGEISQLQEFIREYVK
Sbjct: 241  SGLTGEISQLQEFIREYVK 259


>gb|ACJ84671.1| unknown [Medicago truncatula]
          Length = 260

 Score =  423 bits (1087), Expect = e-116
 Identities = 216/259 (83%), Positives = 222/259 (85%)
 Frame = -3

Query: 1195 MQQEMEQWKEQASHLWLVATDYLREVPPNQXXXXXXXXXXXXXXXXXXXXXXRAKSNTIV 1016
            MQ E+EQWKEQ SHLW VA DYLR+VPPNQ                      R +SNTIV
Sbjct: 1    MQHELEQWKEQFSHLWNVANDYLRDVPPNQLYAAAAIAIFTTLLLLFLRVLKRTESNTIV 60

Query: 1015 LTGLSGSGKTVLFYQLKDGSTHQGTVTSMEPNEGTFILHGETTKKGKIKPVHIVDVPGHS 836
            LTGLSGSGKTVLFYQL+DGSTHQGTVTSMEPNEGTFILHGET KKGKIKPVHIVDVPGHS
Sbjct: 61   LTGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHS 120

Query: 835  RLRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD 656
            RLRPKLDE+LPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD
Sbjct: 121  RLRPKLDEFLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD 180

Query: 655  KVTAHTKEFIRRQLEKEIDKLXXXXXXXXXADVTNEFTLGVPGEPFSFTQCSNKVTTADA 476
            KVTAHTKEFIRRQ+EKEIDKL         ADVTNEFTLGVPGEPFSFTQCSNKVTTADA
Sbjct: 181  KVTAHTKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTTADA 240

Query: 475  SGLTGEISQLQEFIREYVK 419
            SGLTGEISQLQEFIREYVK
Sbjct: 241  SGLTGEISQLQEFIREYVK 259


>gb|AFK37552.1| unknown [Medicago truncatula]
          Length = 260

 Score =  420 bits (1080), Expect = e-115
 Identities = 215/259 (83%), Positives = 221/259 (85%)
 Frame = -3

Query: 1195 MQQEMEQWKEQASHLWLVATDYLREVPPNQXXXXXXXXXXXXXXXXXXXXXXRAKSNTIV 1016
            MQ E+EQWKEQ SHLW VA DYLR+VPPNQ                      R KSNTIV
Sbjct: 1    MQHELEQWKEQFSHLWNVANDYLRDVPPNQLYAAAAVAVFTTLLLLLLRVLKRTKSNTIV 60

Query: 1015 LTGLSGSGKTVLFYQLKDGSTHQGTVTSMEPNEGTFILHGETTKKGKIKPVHIVDVPGHS 836
            LTGLSGSGKTVLFYQL+DGSTHQGTVTSMEPNEGTFILHGET KKGKIKPVHIVDVPGHS
Sbjct: 61   LTGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHS 120

Query: 835  RLRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD 656
            R +PKLDE+LPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD
Sbjct: 121  RRQPKLDEFLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD 180

Query: 655  KVTAHTKEFIRRQLEKEIDKLXXXXXXXXXADVTNEFTLGVPGEPFSFTQCSNKVTTADA 476
            KVTAHTKEFIRRQ+EKEIDKL         ADVTNEFTLGVPGEPFSFTQCSNKVTTADA
Sbjct: 181  KVTAHTKEFIRRQVEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTTADA 240

Query: 475  SGLTGEISQLQEFIREYVK 419
            SGLTGEISQLQEFIREYVK
Sbjct: 241  SGLTGEISQLQEFIREYVK 259


>gb|AFK36205.1| unknown [Lotus japonicus]
          Length = 259

 Score =  409 bits (1052), Expect = e-112
 Identities = 205/258 (79%), Positives = 219/258 (84%)
 Frame = -3

Query: 1189 QEMEQWKEQASHLWLVATDYLREVPPNQXXXXXXXXXXXXXXXXXXXXXXRAKSNTIVLT 1010
            QE+E WKE+ S LWL A+DYLR+VPP Q                      RAK+NT+VLT
Sbjct: 2    QELEHWKEELSRLWLTASDYLRQVPPEQLYIAAAIAVFTTLLLLSLRLFKRAKTNTVVLT 61

Query: 1009 GLSGSGKTVLFYQLKDGSTHQGTVTSMEPNEGTFILHGETTKKGKIKPVHIVDVPGHSRL 830
            GL+GSGKTVLFYQL+DGSTHQGTVTSMEPNEGTFILH ETTKKGK+KPVHIVDVPGHSRL
Sbjct: 62   GLTGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHSETTKKGKVKPVHIVDVPGHSRL 121

Query: 829  RPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKV 650
            RPKLDEYLPQAAG+VFVVDA+DFLPNCRAASEYLYD+LTKGSVV+KKIPLLILCNKTDKV
Sbjct: 122  RPKLDEYLPQAAGVVFVVDAVDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDKV 181

Query: 649  TAHTKEFIRRQLEKEIDKLXXXXXXXXXADVTNEFTLGVPGEPFSFTQCSNKVTTADASG 470
            TAHTKEFIRRQLEKEIDKL         ADVTNEFTLGVPGE FSFTQC NKVTTADASG
Sbjct: 182  TAHTKEFIRRQLEKEIDKLRASRSAVSDADVTNEFTLGVPGEAFSFTQCCNKVTTADASG 241

Query: 469  LTGEISQLQEFIREYVKP 416
            LTGEISQL+EFIREYVKP
Sbjct: 242  LTGEISQLEEFIREYVKP 259


>ref|XP_003519824.1| PREDICTED: signal recognition particle receptor subunit beta-like
            [Glycine max]
          Length = 259

 Score =  402 bits (1033), Expect = e-109
 Identities = 204/257 (79%), Positives = 217/257 (84%)
 Frame = -3

Query: 1189 QEMEQWKEQASHLWLVATDYLREVPPNQXXXXXXXXXXXXXXXXXXXXXXRAKSNTIVLT 1010
            +E+EQWKEQ SH   +A D LREVPPNQ                      RAKSNTIVLT
Sbjct: 2    EELEQWKEQLSHFANLALDRLREVPPNQLYAAAAIAIFTTLLLLSIRLFKRAKSNTIVLT 61

Query: 1009 GLSGSGKTVLFYQLKDGSTHQGTVTSMEPNEGTFILHGETTKKGKIKPVHIVDVPGHSRL 830
            GLSGSGKTVLFYQL+DGSTHQGTVTSMEPNEGTFILH E T+KGKIKPVH+VDVPGHSRL
Sbjct: 62   GLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHNEKTRKGKIKPVHVVDVPGHSRL 121

Query: 829  RPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKV 650
            RPKLDEYLPQAAG+VFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIP+LILCNKTDKV
Sbjct: 122  RPKLDEYLPQAAGVVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPMLILCNKTDKV 181

Query: 649  TAHTKEFIRRQLEKEIDKLXXXXXXXXXADVTNEFTLGVPGEPFSFTQCSNKVTTADASG 470
            TAHTKEFIR+Q+EKEIDKL         AD+ NEFTLGVPGEPFSFTQCSNKVTTADASG
Sbjct: 182  TAHTKEFIRKQMEKEIDKLRASRSAISAADIANEFTLGVPGEPFSFTQCSNKVTTADASG 241

Query: 469  LTGEISQLQEFIREYVK 419
            LTGEISQL+EFIRE+VK
Sbjct: 242  LTGEISQLEEFIREHVK 258


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