BLASTX nr result

ID: Glycyrrhiza24_contig00004916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004916
         (1615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523218.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   714   0.0  
ref|XP_003602643.1| E3 ubiquitin-protein ligase mib1 [Medicago t...   712   0.0  
ref|XP_003525130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   677   0.0  
ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|2...   563   e-158
ref|XP_002309925.1| predicted protein [Populus trichocarpa] gi|1...   563   e-158

>ref|XP_003523218.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Glycine max]
          Length = 432

 Score =  714 bits (1842), Expect = 0.0
 Identities = 350/439 (79%), Positives = 378/439 (86%)
 Frame = +2

Query: 125  MGNSESMYEAQDNFHQHPPSDGSSVNDSYHQPSTYAGSLDSTTTYHQPSSYAGXXXXXXX 304
            MGNSESMYE+QDNF+QHPPS      +SYHQPS YA + ++TT YH+PSSYA        
Sbjct: 1    MGNSESMYESQDNFYQHPPS----YYNSYHQPSPYAENSENTT-YHEPSSYA--WNSSNT 53

Query: 305  XXXXXXXXXXXXXXXQHKNKKHPTYIADNFSSLDQVVSALREAGLESSNLILGIDFTKSN 484
                           +H++ + PTYIADNFSSLDQVVS+LREAGLESSNLILGIDFTKSN
Sbjct: 54   TYYQSSTYAGSSENTRHQHTRQPTYIADNFSSLDQVVSSLREAGLESSNLILGIDFTKSN 113

Query: 485  EWTGKYSFHRKSLHHIGNTPNPYEQAISIVGRTLSSFDEDNMIPCFGFGDASTHDQNVFS 664
            EWTGK+SFHRKSLHHIGNTPNPYEQAISIVG TLSSFDEDN+IPCFGFGDASTHDQNVF 
Sbjct: 114  EWTGKHSFHRKSLHHIGNTPNPYEQAISIVGHTLSSFDEDNLIPCFGFGDASTHDQNVFC 173

Query: 665  FYCDDRYCHGFEEALARYREIVPLLKLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADG 844
            FY D+R+CHGFEE LARYREIVP +KLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADG
Sbjct: 174  FYQDNRFCHGFEEVLARYREIVPYIKLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADG 233

Query: 845  QVSRNPGTPRGKLSPQEQATISSIVAASHYPLSIILVGVGDGPWDEMQQFDDNITERLFD 1024
            QV+RNP  P GKLSPQEQATI+SI+AASHYPLSIILVGVGDGPWDEM+ +DDNITERLFD
Sbjct: 234  QVTRNPDVPYGKLSPQEQATINSIIAASHYPLSIILVGVGDGPWDEMKYYDDNITERLFD 293

Query: 1025 NFQFVNFTKIMSENMDTSKKEAAFALAALMEIPFQYRAAQNIQLTSREPVRYQHKRPLPP 1204
            NFQFVNFTKIMSEN + SKKEA FALAALMEIP QYRAAQNIQL  RE V +QHKRPLPP
Sbjct: 294  NFQFVNFTKIMSENTEASKKEATFALAALMEIPLQYRAAQNIQLNDRESVLHQHKRPLPP 353

Query: 1205 PKEVIDHDNALMAVPHIPKFESGEPTAPAGAEPVCPVCLTNPKDMAFGCGHTTCKECGAT 1384
            P EVI HDNA MA+PH+P  ES E TAPA AEPVCP+CLTNPKDMAFGCGHTTCKECG+T
Sbjct: 354  PNEVIHHDNARMAIPHMPNLESAESTAPAAAEPVCPICLTNPKDMAFGCGHTTCKECGST 413

Query: 1385 LSSCPMCRQQITTRLRLYT 1441
            LSSCPMCR QITTRLRLYT
Sbjct: 414  LSSCPMCRHQITTRLRLYT 432


>ref|XP_003602643.1| E3 ubiquitin-protein ligase mib1 [Medicago truncatula]
            gi|355491691|gb|AES72894.1| E3 ubiquitin-protein ligase
            mib1 [Medicago truncatula]
          Length = 432

 Score =  712 bits (1839), Expect = 0.0
 Identities = 351/435 (80%), Positives = 378/435 (86%), Gaps = 2/435 (0%)
 Frame = +2

Query: 143  MYEAQDNFH-QHPPS-DGSSVNDSYHQPSTYAGSLDSTTTYHQPSSYAGXXXXXXXXXXX 316
            M ++Q  F+ QHPP+ DGSSV++SYHQPS+Y GSLDSTT Y QPS+Y G           
Sbjct: 1    MSQSQHEFYYQHPPNYDGSSVSNSYHQPSSYTGSLDSTT-YDQPSAYTGNLGNTNHHQPS 59

Query: 317  XXXXXXXXXXXQHKNKKHPTYIADNFSSLDQVVSALREAGLESSNLILGIDFTKSNEWTG 496
                       +H + K PTYIADNFSSLDQVVSALREAGLESSNLILGIDFTKSNEWTG
Sbjct: 60   SHATSSVNT--RHHHNKQPTYIADNFSSLDQVVSALREAGLESSNLILGIDFTKSNEWTG 117

Query: 497  KYSFHRKSLHHIGNTPNPYEQAISIVGRTLSSFDEDNMIPCFGFGDASTHDQNVFSFYCD 676
            KYSFHRKSLHHIG+ PNPYEQAISI+GRTLS+FDEDN+IPCFGFGDASTHDQNVFSFY D
Sbjct: 118  KYSFHRKSLHHIGSAPNPYEQAISIIGRTLSTFDEDNLIPCFGFGDASTHDQNVFSFYPD 177

Query: 677  DRYCHGFEEALARYREIVPLLKLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQVSR 856
            +R CHGFEE LARYR+IVP LKLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQV+R
Sbjct: 178  NRVCHGFEEVLARYRQIVPHLKLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQVTR 237

Query: 857  NPGTPRGKLSPQEQATISSIVAASHYPLSIILVGVGDGPWDEMQQFDDNITERLFDNFQF 1036
            NPGTP GKLSPQEQATI+SI+AASHYPLSIILVGVGDGPWDEM+ FDDNIT R+FDNFQF
Sbjct: 238  NPGTPHGKLSPQEQATITSIIAASHYPLSIILVGVGDGPWDEMKHFDDNITGRVFDNFQF 297

Query: 1037 VNFTKIMSENMDTSKKEAAFALAALMEIPFQYRAAQNIQLTSREPVRYQHKRPLPPPKEV 1216
            VNFTKIMSEN + SKKE  FALAALMEIPFQYRAAQNIQL + EPV YQHKRPLPPPKE+
Sbjct: 298  VNFTKIMSENTEASKKETEFALAALMEIPFQYRAAQNIQLANSEPVHYQHKRPLPPPKEI 357

Query: 1217 IDHDNALMAVPHIPKFESGEPTAPAGAEPVCPVCLTNPKDMAFGCGHTTCKECGATLSSC 1396
            IDHDNA +A P I  F+S EPTAPA AEPVCP+CLTNPKDMAFGCGHTTCKECGATLS C
Sbjct: 358  IDHDNAFIATPRITNFDSIEPTAPASAEPVCPICLTNPKDMAFGCGHTTCKECGATLSLC 417

Query: 1397 PMCRQQITTRLRLYT 1441
            PMCRQQITTRLRLYT
Sbjct: 418  PMCRQQITTRLRLYT 432


>ref|XP_003525130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Glycine max]
          Length = 426

 Score =  677 bits (1747), Expect = 0.0
 Identities = 334/443 (75%), Positives = 370/443 (83%), Gaps = 4/443 (0%)
 Frame = +2

Query: 125  MGNSESMYEAQDNFHQHPPS-DGSSVNDS--YHQPSTYAGSLDSTT-TYHQPSSYAGXXX 292
            MGN ES +++ D+F + P S DGSS N S  YHQP +Y GS  +T+  YHQPSSYAG   
Sbjct: 1    MGNEESTHDSHDDFFRQPRSHDGSSPNTSHQYHQPPSYDGSSANTSHQYHQPSSYAGSSV 60

Query: 293  XXXXXXXXXXXXXXXXXXXQHKNKKHPTYIADNFSSLDQVVSALREAGLESSNLILGIDF 472
                               +H+ K+ PTYIAD+FSSLDQVVSALREAGLESSNLI+GIDF
Sbjct: 61   NT-----------------RHQYKQRPTYIADSFSSLDQVVSALREAGLESSNLIIGIDF 103

Query: 473  TKSNEWTGKYSFHRKSLHHIGNTPNPYEQAISIVGRTLSSFDEDNMIPCFGFGDASTHDQ 652
            TKSNEWTGK+SF+ KSLH  GNTPNPYEQAISI+GRTLSSFDEDN+IPCFGFGDASTHDQ
Sbjct: 104  TKSNEWTGKHSFNHKSLHFTGNTPNPYEQAISIIGRTLSSFDEDNLIPCFGFGDASTHDQ 163

Query: 653  NVFSFYCDDRYCHGFEEALARYREIVPLLKLSGPTSFAPVIDAAIDIVERNNGQYHVLVI 832
            NVFSFY D+ YCHGFE+ LARYREIVP LKL+GPTSFAPVIDAA+ IVER+NGQYHVLVI
Sbjct: 164  NVFSFYPDECYCHGFEQVLARYREIVPHLKLAGPTSFAPVIDAAVGIVERSNGQYHVLVI 223

Query: 833  IADGQVSRNPGTPRGKLSPQEQATISSIVAASHYPLSIILVGVGDGPWDEMQQFDDNITE 1012
            IADGQV+RN  TP GK SPQEQATI+SI+AASHYPLSIILVGVGDGPWDEMQ FDDNIT+
Sbjct: 224  IADGQVTRNSDTPHGKFSPQEQATINSIIAASHYPLSIILVGVGDGPWDEMQHFDDNITQ 283

Query: 1013 RLFDNFQFVNFTKIMSENMDTSKKEAAFALAALMEIPFQYRAAQNIQLTSREPVRYQHKR 1192
            RLFDNFQFVNFTKI SEN D SKKEAAFALAALMEIP QYR  QN+Q+ +  P  +Q KR
Sbjct: 284  RLFDNFQFVNFTKITSENKDASKKEAAFALAALMEIPIQYRITQNLQIANENPTSHQRKR 343

Query: 1193 PLPPPKEVIDHDNALMAVPHIPKFESGEPTAPAGAEPVCPVCLTNPKDMAFGCGHTTCKE 1372
            PLPPPKEVID DNA++AVPH+P FES EP+APA  E VCP+CLTNPKDMAFGCGHTTCKE
Sbjct: 344  PLPPPKEVIDRDNAVLAVPHVPNFESVEPSAPAAVESVCPICLTNPKDMAFGCGHTTCKE 403

Query: 1373 CGATLSSCPMCRQQITTRLRLYT 1441
            CG TLSSCPMCRQ+ITTRLRLYT
Sbjct: 404  CGVTLSSCPMCRQEITTRLRLYT 426


>ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|222855711|gb|EEE93258.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  563 bits (1451), Expect = e-158
 Identities = 269/356 (75%), Positives = 310/356 (87%), Gaps = 1/356 (0%)
 Frame = +2

Query: 377  YIADNFSSLDQVVSALREAGLESSNLILGIDFTKSNEWTGKYSFHRKSLHHIGNTPNPYE 556
            YIADNF+SLDQV+S+LREAGLESSNLILGIDFTKSNEWTG++SFHRKSLH IG+T NPYE
Sbjct: 2    YIADNFNSLDQVISSLREAGLESSNLILGIDFTKSNEWTGRHSFHRKSLHAIGSTLNPYE 61

Query: 557  QAISIVGRTLSSFDEDNMIPCFGFGDASTHDQNVFSFYCDDRYCHGFEEALARYREIVPL 736
            QAISI+GRTLS FDEDN+IPCFGFGDASTHD++VFSFY D+R C+G EEAL RYREIVP 
Sbjct: 62   QAISIIGRTLSPFDEDNLIPCFGFGDASTHDKHVFSFYPDNRPCNGLEEALTRYREIVPH 121

Query: 737  LKLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQVSRNPGTPRGKLSPQEQATISSI 916
            LKLSGPTSFAP+IDAAIDIVE++ GQYHVLV+IADGQV+R P TP G+ SPQE AT++SI
Sbjct: 122  LKLSGPTSFAPIIDAAIDIVEKSGGQYHVLVVIADGQVTRGPDTPPGRFSPQEHATVNSI 181

Query: 917  VAASHYPLSIILVGVGDGPWDEMQQFDDNITERLFDNFQFVNFTKIMSENMDTSKKEAAF 1096
            VAAS YP+SIILVGVGDGPWD MQQFDDNI +R FDNFQFVNFTKIMS+N + SKKE AF
Sbjct: 182  VAASKYPISIILVGVGDGPWDAMQQFDDNIPQRAFDNFQFVNFTKIMSDNTEASKKETAF 241

Query: 1097 ALAALMEIPFQYRAAQNIQLTSREPVRYQHKRPLPPPKEVIDHDNALMAVPHIPKFESGE 1276
            ALAALMEIP QYRA Q +QL         H R LPPP+EVIDHDNA+ ++PH+  F+  +
Sbjct: 242  ALAALMEIPLQYRATQTLQLGG------PHTRLLPPPREVIDHDNAVKSIPHMTNFKPVQ 295

Query: 1277 PTAP-AGAEPVCPVCLTNPKDMAFGCGHTTCKECGATLSSCPMCRQQITTRLRLYT 1441
            PTAP A  EPVCP+CL NPKD+AFGCGH TC++CGA++S+CP+CRQ ITTRLRL+T
Sbjct: 296  PTAPTASVEPVCPICLANPKDLAFGCGHMTCRDCGASISACPLCRQPITTRLRLFT 351


>ref|XP_002309925.1| predicted protein [Populus trichocarpa] gi|118486339|gb|ABK95010.1|
            unknown [Populus trichocarpa] gi|222852828|gb|EEE90375.1|
            predicted protein [Populus trichocarpa]
          Length = 364

 Score =  563 bits (1451), Expect = e-158
 Identities = 272/363 (74%), Positives = 316/363 (87%)
 Frame = +2

Query: 353  HKNKKHPTYIADNFSSLDQVVSALREAGLESSNLILGIDFTKSNEWTGKYSFHRKSLHHI 532
            ++ ++HPTYIADNF+SLDQV+SALREAGLESSNLILGIDFTKSNEWTG++SFHRKSLH I
Sbjct: 5    YQRRQHPTYIADNFNSLDQVISALREAGLESSNLILGIDFTKSNEWTGRHSFHRKSLHAI 64

Query: 533  GNTPNPYEQAISIVGRTLSSFDEDNMIPCFGFGDASTHDQNVFSFYCDDRYCHGFEEALA 712
            G+T NPYEQAISI+GRTLS FDEDN+IPCFGFGDASTHD+ VFSFY D+R C+  EEALA
Sbjct: 65   GSTLNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDKYVFSFYPDNRPCNDLEEALA 124

Query: 713  RYREIVPLLKLSGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQVSRNPGTPRGKLSPQ 892
            RYREIVP LKLSGPTSFA +I+AAIDIVE+ +GQYHVLVIIADGQV+R P TP G+LSPQ
Sbjct: 125  RYREIVPHLKLSGPTSFAAIINAAIDIVEK-SGQYHVLVIIADGQVTRTPDTPPGRLSPQ 183

Query: 893  EQATISSIVAASHYPLSIILVGVGDGPWDEMQQFDDNITERLFDNFQFVNFTKIMSENMD 1072
            EQAT++SIVAAS +PLSII VGVGDGPW+ MQQFDDNI +R FDNFQFVNFTKIM +N +
Sbjct: 184  EQATVNSIVAASKHPLSIIFVGVGDGPWNAMQQFDDNIPQREFDNFQFVNFTKIMLDNTE 243

Query: 1073 TSKKEAAFALAALMEIPFQYRAAQNIQLTSREPVRYQHKRPLPPPKEVIDHDNALMAVPH 1252
             SKKE AFALAALMEIP QYRA Q +Q T  + V     RPLPPP+EVIDHDNA+ ++PH
Sbjct: 244  ASKKETAFALAALMEIPLQYRATQRLQHTDHDLVGGPRTRPLPPPREVIDHDNAVKSIPH 303

Query: 1253 IPKFESGEPTAPAGAEPVCPVCLTNPKDMAFGCGHTTCKECGATLSSCPMCRQQITTRLR 1432
            I  FE+ +P+     EPVCP+CLTNPKDMAFGCGH TC++CGA+LS+CP+CRQ ITTRL+
Sbjct: 304  ITNFETVQPS--TSVEPVCPICLTNPKDMAFGCGHLTCRDCGASLSTCPICRQPITTRLK 361

Query: 1433 LYT 1441
            L+T
Sbjct: 362  LFT 364


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