BLASTX nr result

ID: Glycyrrhiza24_contig00004909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004909
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [...   167   6e-40
ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...   164   5e-39
ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [...   158   4e-37
ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [...   156   1e-36
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...   150   8e-35

>ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1064

 Score =  167 bits (424), Expect = 6e-40
 Identities = 86/96 (89%), Positives = 91/96 (94%)
 Frame = +3

Query: 3   KNEQIIKEGMVFNVSLGFQNLQSEKTKSKNKLFSLLLADTVIISKDKTEVVTSMSSKALK 182
           KNEQI+KEGMVFNVSLGFQN+Q E TKSK+K FSLLLADTVII+KDKTEVVTSMSSKALK
Sbjct: 391 KNEQIVKEGMVFNVSLGFQNVQRESTKSKSKHFSLLLADTVIINKDKTEVVTSMSSKALK 450

Query: 183 DIAYSFNEDEEEEKPTAKADANGAEPSMSKTTLRSD 290
           DIAYSFNEDEEEE P+AKADANGAEP MSKTTLRSD
Sbjct: 451 DIAYSFNEDEEEENPSAKADANGAEPLMSKTTLRSD 486


>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
           gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
           subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score =  164 bits (416), Expect = 5e-39
 Identities = 83/96 (86%), Positives = 89/96 (92%)
 Frame = +3

Query: 3   KNEQIIKEGMVFNVSLGFQNLQSEKTKSKNKLFSLLLADTVIISKDKTEVVTSMSSKALK 182
           KNEQ++KEGMVFNVSLGFQN+Q E +KSKNK FSLLLADTVII+KDKTEVVTSMSSKALK
Sbjct: 394 KNEQLVKEGMVFNVSLGFQNVQRESSKSKNKHFSLLLADTVIINKDKTEVVTSMSSKALK 453

Query: 183 DIAYSFNEDEEEEKPTAKADANGAEPSMSKTTLRSD 290
           D+AYSFNEDEEEE P AKAD NGAEP MSKTTLRSD
Sbjct: 454 DVAYSFNEDEEEENPRAKADTNGAEPLMSKTTLRSD 489


>ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/96 (83%), Positives = 88/96 (91%)
 Frame = +3

Query: 3   KNEQIIKEGMVFNVSLGFQNLQSEKTKSKNKLFSLLLADTVIISKDKTEVVTSMSSKALK 182
           KNEQII+EGMVFNVSLGFQNLQ EK+KSKNK FSLLLADTVII+KDKTE+VT+ SSKALK
Sbjct: 394 KNEQIIREGMVFNVSLGFQNLQCEKSKSKNKQFSLLLADTVIITKDKTEIVTATSSKALK 453

Query: 183 DIAYSFNEDEEEEKPTAKADANGAEPSMSKTTLRSD 290
           D+AYSFNEDEEEE+P+ K DA  AEP MSKTTLRSD
Sbjct: 454 DVAYSFNEDEEEERPSTKPDAKKAEPFMSKTTLRSD 489


>ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  156 bits (395), Expect = 1e-36
 Identities = 79/96 (82%), Positives = 87/96 (90%)
 Frame = +3

Query: 3   KNEQIIKEGMVFNVSLGFQNLQSEKTKSKNKLFSLLLADTVIISKDKTEVVTSMSSKALK 182
           KNEQII+EGMVFNVSLGFQNLQ E +KSKNK FSLLLADTVII+KDKTE+VTS SSKALK
Sbjct: 394 KNEQIIREGMVFNVSLGFQNLQCENSKSKNKQFSLLLADTVIITKDKTEIVTSTSSKALK 453

Query: 183 DIAYSFNEDEEEEKPTAKADANGAEPSMSKTTLRSD 290
           D+AYSFNEDEEEE+P+ K+DA  AEP M KTTLRSD
Sbjct: 454 DVAYSFNEDEEEERPSTKSDAKKAEPFMCKTTLRSD 489


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
           gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
           [Medicago truncatula]
          Length = 1066

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/96 (78%), Positives = 87/96 (90%)
 Frame = +3

Query: 3   KNEQIIKEGMVFNVSLGFQNLQSEKTKSKNKLFSLLLADTVIISKDKTEVVTSMSSKALK 182
           KN+QI+KEGM FNVSLGFQNLQ E +KSKNK+F+LLLADTVII+KDK++VVTS+SSKALK
Sbjct: 394 KNDQIVKEGMTFNVSLGFQNLQCENSKSKNKVFALLLADTVIINKDKSDVVTSVSSKALK 453

Query: 183 DIAYSFNEDEEEEKPTAKADANGAEPSMSKTTLRSD 290
           D+AYSFNEDEEEEKP +KAD +G E   SKTTLRSD
Sbjct: 454 DVAYSFNEDEEEEKPKSKADHSGTEHLASKTTLRSD 489


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