BLASTX nr result

ID: Glycyrrhiza24_contig00004870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004870
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37785.1| unknown [Lotus japonicus] gi|388516355|gb|AFK4623...   176   5e-42
ref|NP_001237080.1| uncharacterized protein LOC100305559 [Glycin...   164   2e-38
ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatu...   157   2e-36
ref|NP_001235661.1| uncharacterized protein LOC100306481 [Glycin...   152   1e-34
ref|XP_002324518.1| predicted protein [Populus trichocarpa] gi|2...   148   2e-33

>gb|AFK37785.1| unknown [Lotus japonicus] gi|388516355|gb|AFK46239.1| unknown
           [Lotus japonicus]
          Length = 148

 Score =  176 bits (447), Expect = 5e-42
 Identities = 101/153 (66%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
 Frame = +2

Query: 110 MALACATATVSFAFKPLPXXXXXXXXXXTRLSYGSVRFXXXXXXXXXXXXXXXXXXXXXX 289
           MALA ATAT S AF  LP          TRLSY SVR                       
Sbjct: 1   MALASATATASSAFSFLPCSSSP-----TRLSYASVRLPPSHKTNSVKLSSSACISTPIF 55

Query: 290 HQNLCTITPPP-RSLTIVCAKGYKMKTHKASAKRFRVTGGGKIMRRRAGKQHLLAKKNTK 466
            Q LCT+TPP  RSLTIV AKGYKMKTHKASAKRFRVTG GKI+RRRAGKQHLL KKNTK
Sbjct: 56  QQKLCTVTPPSSRSLTIVAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLQKKNTK 115

Query: 467 RKLRLSKLHMVSRSDYDNVIGALPYLKVNRKAT 565
           RKLRLSK+H V+RSDYDNVIGALPYLKVNR AT
Sbjct: 116 RKLRLSKMHPVNRSDYDNVIGALPYLKVNRNAT 148


>ref|NP_001237080.1| uncharacterized protein LOC100305559 [Glycine max]
           gi|255625911|gb|ACU13300.1| unknown [Glycine max]
          Length = 147

 Score =  164 bits (415), Expect = 2e-38
 Identities = 94/149 (63%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
 Frame = +2

Query: 131 ATVSFAFKPLPXXXXXXXXXXTRLSYGSVRFXXXXXXXXXXXXXXXXXXXXXXHQNLCTI 310
           A+VSFA   LP          TR+SYGSVRF                      HQ LCT+
Sbjct: 2   ASVSFAVGLLPCSSSSCY---TRVSYGSVRFPVLNNANPLKLSSSANISSPILHQKLCTV 58

Query: 311 TPP----PRSLTIVCAKGYKMKTHKASAKRFRVTGGGKIMRRRAGKQHLLAKKNTKRKLR 478
             P    PR LTIV AKGYKMKTHKASAKRFRVTG GKI+ RRAGKQHLL KKNTKRK R
Sbjct: 59  PSPLALRPRPLTIVSAKGYKMKTHKASAKRFRVTGRGKIVCRRAGKQHLLVKKNTKRKSR 118

Query: 479 LSKLHMVSRSDYDNVIGALPYLKVNRKAT 565
           LSK+H VSRSDYDNVIGALPYLKVNR AT
Sbjct: 119 LSKMHAVSRSDYDNVIGALPYLKVNRNAT 147


>ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatula]
           gi|217071304|gb|ACJ84012.1| unknown [Medicago
           truncatula] gi|355511318|gb|AES92460.1| 50S ribosomal
           protein L35 [Medicago truncatula]
           gi|388495356|gb|AFK35744.1| unknown [Medicago
           truncatula]
          Length = 148

 Score =  157 bits (398), Expect = 2e-36
 Identities = 93/152 (61%), Positives = 102/152 (67%)
 Frame = +2

Query: 110 MALACATATVSFAFKPLPXXXXXXXXXXTRLSYGSVRFXXXXXXXXXXXXXXXXXXXXXX 289
           MALA ATATVS +F  L           TR+S+ SV+                       
Sbjct: 1   MALASATATVS-SFAAL---RLSPPSTSTRVSFSSVKSPFSNNVNSLKLNWSCSISAPIL 56

Query: 290 HQNLCTITPPPRSLTIVCAKGYKMKTHKASAKRFRVTGGGKIMRRRAGKQHLLAKKNTKR 469
           +QN   +T  PRSLTIV AKGYKMKTHKASAKRFRVTG GKI+RRRAGKQHLL KKN KR
Sbjct: 57  NQNHSIVTTSPRSLTIVSAKGYKMKTHKASAKRFRVTGAGKIVRRRAGKQHLLYKKNKKR 116

Query: 470 KLRLSKLHMVSRSDYDNVIGALPYLKVNRKAT 565
           KLRLSK+  V+RSDYDNVIGALPYLKVNRKAT
Sbjct: 117 KLRLSKMIQVNRSDYDNVIGALPYLKVNRKAT 148


>ref|NP_001235661.1| uncharacterized protein LOC100306481 [Glycine max]
           gi|255628681|gb|ACU14685.1| unknown [Glycine max]
          Length = 138

 Score =  152 bits (384), Expect = 1e-34
 Identities = 83/128 (64%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
 Frame = +2

Query: 200 LSYGSVRFXXXXXXXXXXXXXXXXXXXXXXHQNLCTI------TPPPRSLTIVCAKGYKM 361
           L Y SVRF                       Q LC++      +P PR LTIV AKGYKM
Sbjct: 11  LPYASVRFPVLSNANSLKLSSSASISTPILQQKLCSLLSPLPLSPRPRPLTIVSAKGYKM 70

Query: 362 KTHKASAKRFRVTGGGKIMRRRAGKQHLLAKKNTKRKLRLSKLHMVSRSDYDNVIGALPY 541
           KTHKASAKRFRVTG GKI+RRRAGKQHLL KKNTKRK RLSK+H VSRSDYDNVIGALPY
Sbjct: 71  KTHKASAKRFRVTGQGKIVRRRAGKQHLLVKKNTKRKSRLSKMHAVSRSDYDNVIGALPY 130

Query: 542 LKVNRKAT 565
           LKVNR AT
Sbjct: 131 LKVNRNAT 138


>ref|XP_002324518.1| predicted protein [Populus trichocarpa] gi|222865952|gb|EEF03083.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/90 (82%), Positives = 82/90 (91%)
 Frame = +2

Query: 296 NLCTITPPPRSLTIVCAKGYKMKTHKASAKRFRVTGGGKIMRRRAGKQHLLAKKNTKRKL 475
           ++ ++T   +SLT+  AKGYKMKTHKASAKRFRVTG GKI+RRRAGKQHLLAKKNTKRKL
Sbjct: 61  SITSLTQRFQSLTVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKL 120

Query: 476 RLSKLHMVSRSDYDNVIGALPYLKVNRKAT 565
           RLSK+H VSRSDYDNVIGALPYLKVNRKAT
Sbjct: 121 RLSKMHPVSRSDYDNVIGALPYLKVNRKAT 150


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