BLASTX nr result

ID: Glycyrrhiza24_contig00004850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004850
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX54788.2| putative arginine/serine-rich splicing factor [Ar...    91   8e-18
ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing fac...    91   8e-18
ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycin...    91   8e-18
ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatul...    89   2e-17
ref|XP_003603553.1| Splicing factor arginine/serine-rich [Medica...    85   1e-16

>gb|ACX54788.2| putative arginine/serine-rich splicing factor [Arachis diogoi]
           gi|357018296|gb|AET50931.1| SR-protein [Arachis diogoi]
           gi|414005520|gb|AFW97328.1| SR protein [Arachis diogoi]
          Length = 181

 Score = 90.5 bits (223), Expect(2) = 8e-18
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 240 YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD 365
           YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD
Sbjct: 5   YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD 46



 Score = 24.6 bits (52), Expect(2) = 8e-18
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +2

Query: 131 MTRVYVGNLDS 163
           M+RVYVGNLDS
Sbjct: 1   MSRVYVGNLDS 11


>ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
           max]
          Length = 178

 Score = 90.5 bits (223), Expect(2) = 8e-18
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 240 YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD 365
           YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD
Sbjct: 5   YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD 46



 Score = 24.6 bits (52), Expect(2) = 8e-18
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +2

Query: 131 MTRVYVGNLDS 163
           M+RVYVGNLDS
Sbjct: 1   MSRVYVGNLDS 11


>ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycine max]
           gi|255625755|gb|ACU13222.1| unknown [Glycine max]
           gi|255635722|gb|ACU18210.1| unknown [Glycine max]
          Length = 178

 Score = 90.5 bits (223), Expect(2) = 8e-18
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 240 YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD 365
           YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD
Sbjct: 5   YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD 46



 Score = 24.6 bits (52), Expect(2) = 8e-18
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +2

Query: 131 MTRVYVGNLDS 163
           M+RVYVGNLDS
Sbjct: 1   MSRVYVGNLDS 11


>ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatula]
           gi|355477697|gb|AES58900.1| RNA-binding protein Rsf1
           [Medicago truncatula]
          Length = 190

 Score = 89.0 bits (219), Expect(2) = 2e-17
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 240 YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD 365
           YVGNLDSRV+ERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD
Sbjct: 5   YVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD 46



 Score = 24.6 bits (52), Expect(2) = 2e-17
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +2

Query: 131 MTRVYVGNLDS 163
           M+RVYVGNLDS
Sbjct: 1   MSRVYVGNLDS 11


>ref|XP_003603553.1| Splicing factor arginine/serine-rich [Medicago truncatula]
           gi|355492601|gb|AES73804.1| Splicing factor
           arginine/serine-rich [Medicago truncatula]
          Length = 199

 Score = 85.1 bits (209), Expect(2) = 1e-16
 Identities = 37/42 (88%), Positives = 41/42 (97%)
 Frame = +3

Query: 240 YVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFD 365
           Y+GNLDSR++ERDLED+F VFGVIRSVWVARRPPGYAFIDFD
Sbjct: 5   YIGNLDSRISERDLEDDFHVFGVIRSVWVARRPPGYAFIDFD 46



 Score = 25.8 bits (55), Expect(2) = 1e-16
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +2

Query: 131 MTRVYVGNLDS 163
           MTRVY+GNLDS
Sbjct: 1   MTRVYIGNLDS 11


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