BLASTX nr result

ID: Glycyrrhiza24_contig00004836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004836
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624959.1| General transcription factor IIH subunit [Me...    74   2e-11
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...    73   3e-11
gb|ACU17743.1| unknown [Glycine max]                                   73   3e-11
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ...    70   2e-10

>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355499974|gb|AES81177.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 426

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/39 (87%), Positives = 36/39 (92%), Gaps = 2/39 (5%)
 Frame = -2

Query: 111 MNNIAQRPLNGDIEDDDEDEAN--GLEAWERAYTEDRSW 1
           MNNIA +PLNGD+EDDDEDEAN  GLEAWERAYTEDRSW
Sbjct: 1   MNNIAGKPLNGDLEDDDEDEANDDGLEAWERAYTEDRSW 39


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2-like [Glycine
           max]
          Length = 420

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -2

Query: 111 MNNIAQRPLNGDIEDDDEDEANGLEAWERAYTEDRSW 1
           MNN+A+RPLNGD+EDDDED+  GLEAWER Y EDRSW
Sbjct: 1   MNNVAERPLNGDVEDDDEDDGGGLEAWERTYAEDRSW 37


>gb|ACU17743.1| unknown [Glycine max]
          Length = 214

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -2

Query: 111 MNNIAQRPLNGDIEDDDEDEANGLEAWERAYTEDRSW 1
           MNN+A+RPLNGD+EDDDED+  GLEAWER Y EDRSW
Sbjct: 1   MNNVAERPLNGDVEDDDEDDGGGLEAWERTYAEDRSW 37


>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like [Glycine
           max]
          Length = 419

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -2

Query: 111 MNNIAQRPLNGDIEDDDEDEANGLEAWERAYTEDRSW 1
           MNN+A+RPLN D+EDDDED+  GLEAWER Y EDRSW
Sbjct: 1   MNNVAERPLNKDVEDDDEDDGGGLEAWERTYAEDRSW 37


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