BLASTX nr result

ID: Glycyrrhiza24_contig00004821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004821
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like ...   260   5e-67
ref|XP_003517122.1| PREDICTED: RING-H2 finger protein ATL8-like ...   248   2e-63
ref|XP_003612411.1| Ring finger protein [Medicago truncatula] gi...   248   3e-63
ref|XP_003629097.1| Ring finger protein [Medicago truncatula] gi...   193   6e-47
ref|XP_002532473.1| protein with unknown function [Ricinus commu...   183   6e-44

>ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
          Length = 226

 Score =  260 bits (664), Expect = 5e-67
 Identities = 133/184 (72%), Positives = 139/184 (75%), Gaps = 5/184 (2%)
 Frame = -3

Query: 928 MTRTLRILKSTDNXXXXXXXXXXXXXXXXXXSDFXXXXXXXXXXXXXXVGLIAVARCAWL 749
           MTR  RIL S DN                   DF              VGL+AVARCAWL
Sbjct: 1   MTRAFRILNSADNATAVAAAAPPPEAVALES-DFVVILAALLCALICVVGLVAVARCAWL 59

Query: 748 RRGTGAGNSPQQALANKGVKKKVVQSLPKFAYVDSNPSKWLATSECAICLSEFAAGDEIR 569
           RRG+GAGNSP+QALANKG+KKKV+QSLPKFAYVDSNPSKWLATSECAICL+EFAAGDEIR
Sbjct: 60  RRGSGAGNSPRQALANKGLKKKVLQSLPKFAYVDSNPSKWLATSECAICLAEFAAGDEIR 119

Query: 568 VLPQCGHGFHVACIDTWLGSHSSCPSCRQVLAAARCQKCGRFPATGAGVS-----EPELK 404
           VLPQCGHGFHV CIDTWLGSHSSCPSCRQVLA ARCQKCGRFPATGAG S     EPELK
Sbjct: 120 VLPQCGHGFHVPCIDTWLGSHSSCPSCRQVLAVARCQKCGRFPATGAGASRTPATEPELK 179

Query: 403 SRED 392
           SRED
Sbjct: 180 SRED 183


>ref|XP_003517122.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
          Length = 223

 Score =  248 bits (634), Expect = 2e-63
 Identities = 125/184 (67%), Positives = 136/184 (73%), Gaps = 5/184 (2%)
 Frame = -3

Query: 928 MTRTLRILKSTDNXXXXXXXXXXXXXXXXXXSDFXXXXXXXXXXXXXXVGLIAVARCAWL 749
           MTR  RIL S DN                   DF              VGL+AVARCAW 
Sbjct: 1   MTRAFRILGSADNATSLAAVAAPPEAVALES-DFVVILAALLCALICVVGLVAVARCAWF 59

Query: 748 RRGTGAGNSPQQALANKGVKKKVVQSLPKFAYVDSNPSKWLATSECAICLSEFAAGDEIR 569
           R+G+G G+SP+QALANKG+KKKV+QSLPKFAYVDSNPSKW+ATSECAICL++FAAGDEIR
Sbjct: 60  RQGSGGGSSPRQALANKGLKKKVLQSLPKFAYVDSNPSKWVATSECAICLADFAAGDEIR 119

Query: 568 VLPQCGHGFHVACIDTWLGSHSSCPSCRQVLAAARCQKCGRFPATGAGVS-----EPELK 404
           VLPQCGHGFHV CIDTWLGSHSSCPSCRQ+LA  RCQKCGRFPATGAG S     EPELK
Sbjct: 120 VLPQCGHGFHVPCIDTWLGSHSSCPSCRQILAVTRCQKCGRFPATGAGASRTPATEPELK 179

Query: 403 SRED 392
           SRED
Sbjct: 180 SRED 183


>ref|XP_003612411.1| Ring finger protein [Medicago truncatula]
           gi|355513746|gb|AES95369.1| Ring finger protein
           [Medicago truncatula] gi|388496508|gb|AFK36320.1|
           unknown [Medicago truncatula]
          Length = 215

 Score =  248 bits (632), Expect = 3e-63
 Identities = 127/184 (69%), Positives = 136/184 (73%), Gaps = 5/184 (2%)
 Frame = -3

Query: 928 MTRTLRILKSTDNXXXXXXXXXXXXXXXXXXSDFXXXXXXXXXXXXXXVGLIAVARCAWL 749
           MTR LRIL S +                    DF              VGLIAVARCAWL
Sbjct: 1   MTRPLRILLSMETTPTTVVVAPPPEAVAIES-DFVVILAALLCALICVVGLIAVARCAWL 59

Query: 748 RRGTGAGNSPQQALANKGVKKKVVQSLPKFAYVDSNPSKWLATSECAICLSEFAAGDEIR 569
           RR +GAGNSPQQALANKG+KKKV+QSLPKF+YVDSNP KWLAT+ECAICLS+FAAGDEIR
Sbjct: 60  RRDSGAGNSPQQALANKGLKKKVLQSLPKFSYVDSNPGKWLATTECAICLSDFAAGDEIR 119

Query: 568 VLPQCGHGFHVACIDTWLGSHSSCPSCRQVLAAARCQKCGRFP-----ATGAGVSEPELK 404
           VLPQCGHGFHVACIDTWLGSHSSCPSCRQ+LA  RCQKCGRFP     ATG  VSEPE+K
Sbjct: 120 VLPQCGHGFHVACIDTWLGSHSSCPSCRQILAVTRCQKCGRFPANGGEATGVTVSEPEMK 179

Query: 403 SRED 392
           SRED
Sbjct: 180 SRED 183


>ref|XP_003629097.1| Ring finger protein [Medicago truncatula]
           gi|355523119|gb|AET03573.1| Ring finger protein
           [Medicago truncatula]
          Length = 203

 Score =  193 bits (491), Expect = 6e-47
 Identities = 85/119 (71%), Positives = 97/119 (81%)
 Frame = -3

Query: 781 GLIAVARCAWLRRGTGAGNSPQQALANKGVKKKVVQSLPKFAYVDSNPSKWLATSECAIC 602
           GL A+ARCAWLRR   AG SP  A+ANKG+KKKV+ SLPKF Y+D  P KW+ +SECAIC
Sbjct: 42  GLTAIARCAWLRRTPVAGASPSAAVANKGLKKKVLNSLPKFTYLDDTPGKWVVSSECAIC 101

Query: 601 LSEFAAGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQVLAAARCQKCGRFPATGAG 425
           +SEF AG+E+RVLPQCGHGFHVAC+DTWLGSHSSCPSCR   A ARCQKCG +  T AG
Sbjct: 102 ISEFTAGEEVRVLPQCGHGFHVACVDTWLGSHSSCPSCRAPFAVARCQKCGLYQPTAAG 160


>ref|XP_002532473.1| protein with unknown function [Ricinus communis]
           gi|223527798|gb|EEF29897.1| protein with unknown
           function [Ricinus communis]
          Length = 204

 Score =  183 bits (465), Expect = 6e-44
 Identities = 87/135 (64%), Positives = 99/135 (73%), Gaps = 6/135 (4%)
 Frame = -3

Query: 781 GLIAVARCAWLRRGTGAGNSPQQALANKGVKKKVVQSLPKFAYVDSNPSKWLATSECAIC 602
           GLIAVARCAWLR    A +SP  A ANKG+KKK++QSLPKF Y  +  S   A++ECAIC
Sbjct: 45  GLIAVARCAWLRHSGSASSSPSHAAANKGLKKKILQSLPKFTYGSAAGSCKFASTECAIC 104

Query: 601 LSEFAAGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQVLAAARCQKCGRFPATGAGV 422
           L EFA GDE+RVLPQCGHGFHV CIDTWLGSHSSCPSCRQ+L  ARC  CGRFP   +  
Sbjct: 105 LGEFAQGDEVRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQILVVARCHTCGRFPTISSSS 164

Query: 421 S------EPELKSRE 395
           S      E + K+RE
Sbjct: 165 SCDGANAEADSKARE 179


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