BLASTX nr result

ID: Glycyrrhiza24_contig00004786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004786
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633543.1| PREDICTED: uncharacterized protein LOC100255...   258   2e-66
emb|CAN72907.1| hypothetical protein VITISV_033868 [Vitis vinifera]   258   2e-66
ref|NP_001237285.1| uncharacterized protein LOC100527780 [Glycin...   233   4e-61
ref|XP_002299223.1| predicted protein [Populus trichocarpa] gi|2...   216   1e-53
emb|CBI28617.3| unnamed protein product [Vitis vinifera]              210   7e-52

>ref|XP_003633543.1| PREDICTED: uncharacterized protein LOC100255414 [Vitis vinifera]
          Length = 260

 Score =  258 bits (660), Expect = 2e-66
 Identities = 146/264 (55%), Positives = 177/264 (67%), Gaps = 13/264 (4%)
 Frame = +2

Query: 194 MDDGNAELSDKLSDNVLFSNPQSSSNFQASTSVNT-VTELXXXXXXXXXXXXXNPPGPDD 370
           MDDG  ELSD    +VL SNP SSSNFQ ST +++ + +              NPPGPD 
Sbjct: 1   MDDGEVELSD----HVLLSNPNSSSNFQGSTPIDSFLDDFLKNTRTCTHTHTCNPPGPD- 55

Query: 371 AXXXXXXXXXXXQVFASEDDTN--------SRPKRPSGNREAVRKYREKKKAHTAYLEEE 526
           A           QVFASE+D          S+ +RPSGNREAVRKYREKKKAHTAYLEEE
Sbjct: 56  AAHTHTCYHTHTQVFASEEDEVPNNKEHLISKVRRPSGNREAVRKYREKKKAHTAYLEEE 115

Query: 527 VKKLRLVNQQLVRKLQGQALLEAELSRLRNTLAHLKGKIDSELGSFPFQKQCSTSTVFKE 706
           VKKLRL+NQQLV+KLQGQA+LEAE+ RLR+ L  L+GKID+ELG FPFQKQC+T+  FKE
Sbjct: 116 VKKLRLLNQQLVKKLQGQAVLEAEVLRLRSLLLDLRGKIDNELGVFPFQKQCNTTLSFKE 175

Query: 707 G----LSTSRTIGLQCQNNLPCFHPHAGSSSSKANTCAYGKSMIPWEGNCQHEIVDCQVA 874
           G     S S  I  +C+ +LPCFHPH G SSS+A+    GK ++ WEGNCQ  +VDC+  
Sbjct: 176 GDCGLQSASGAIDPRCEMDLPCFHPHVG-SSSQASISGSGKMVVSWEGNCQPAVVDCRGN 234

Query: 875 ANNMTNTEGQTRDTMDNFTSSASQ 946
            N+M + EG T DT++   SSASQ
Sbjct: 235 INDMVSAEGHTMDTVEALVSSASQ 258


>emb|CAN72907.1| hypothetical protein VITISV_033868 [Vitis vinifera]
          Length = 260

 Score =  258 bits (660), Expect = 2e-66
 Identities = 146/264 (55%), Positives = 177/264 (67%), Gaps = 13/264 (4%)
 Frame = +2

Query: 194 MDDGNAELSDKLSDNVLFSNPQSSSNFQASTSVNT-VTELXXXXXXXXXXXXXNPPGPDD 370
           MDDG  ELSD    +VL SNP SSSNFQ ST +++ + +              NPPGPD 
Sbjct: 1   MDDGEVELSD----HVLLSNPNSSSNFQGSTPIDSFLDDFLKNTRTCTHTHTCNPPGPD- 55

Query: 371 AXXXXXXXXXXXQVFASEDDTN--------SRPKRPSGNREAVRKYREKKKAHTAYLEEE 526
           A           QVFASE+D          S+ +RPSGNREAVRKYREKKKAHTAYLEEE
Sbjct: 56  AAHTHTCYHTHTQVFASEEDEVPNNKEHXISKVRRPSGNREAVRKYREKKKAHTAYLEEE 115

Query: 527 VKKLRLVNQQLVRKLQGQALLEAELSRLRNTLAHLKGKIDSELGSFPFQKQCSTSTVFKE 706
           VKKLRL+NQQLV+KLQGQA+LEAE+ RLR+ L  L+GKID+ELG FPFQKQC+T+  FKE
Sbjct: 116 VKKLRLLNQQLVKKLQGQAVLEAEVLRLRSLLLDLRGKIDNELGVFPFQKQCNTTLSFKE 175

Query: 707 G----LSTSRTIGLQCQNNLPCFHPHAGSSSSKANTCAYGKSMIPWEGNCQHEIVDCQVA 874
           G     S S  I  +C+ +LPCFHPH G SSS+A+    GK ++ WEGNCQ  +VDC+  
Sbjct: 176 GDCGLQSASGAIDPRCEMDLPCFHPHVG-SSSQASISGSGKMVVSWEGNCQPAVVDCRGN 234

Query: 875 ANNMTNTEGQTRDTMDNFTSSASQ 946
            N+M + EG T DT++   SSASQ
Sbjct: 235 INDMVSAEGHTMDTVEALVSSASQ 258


>ref|NP_001237285.1| uncharacterized protein LOC100527780 [Glycine max]
           gi|255633196|gb|ACU16954.1| unknown [Glycine max]
          Length = 199

 Score =  233 bits (595), Expect(2) = 4e-61
 Identities = 135/200 (67%), Positives = 148/200 (74%), Gaps = 7/200 (3%)
 Frame = +2

Query: 194 MDDGNAELSDKLSDN-VLFSNPQSSSNFQASTSVNTVTELXXXXXXXXXXXXXNPPGPDD 370
           MDDGNAELSDKLSDN VLF NP+S S+FQAS+S  T T               NPPGPD 
Sbjct: 1   MDDGNAELSDKLSDNNVLFLNPESCSSFQASSSSRTCTHTHTC----------NPPGPD- 49

Query: 371 AXXXXXXXXXXXQVFASEDD----TNSRPKRPSGNREAVRKYREKKKAHTAYLEEEVKKL 538
           A           QVFA EDD    +NS+ KRPSGNREAVRKYREKKKAHTAYLEEEVKKL
Sbjct: 50  AAHTHTCYHTHTQVFAPEDDGRKHSNSKQKRPSGNREAVRKYREKKKAHTAYLEEEVKKL 109

Query: 539 RLVNQQLVRKLQGQALLEAELSRLRNTLAHLKGKIDSELGSFPFQKQ-CSTSTVFKEGLS 715
            +VNQQLVRKLQGQALLEAEL+RLR+ LA LKGKIDSELG++PFQKQ C+TS +FKEG  
Sbjct: 110 HMVNQQLVRKLQGQALLEAELARLRSILARLKGKIDSELGAWPFQKQYCNTSYIFKEG-- 167

Query: 716 TSRTIGLQCQ-NNLPCFHPH 772
                GL+CQ NNLPCFHPH
Sbjct: 168 ---DAGLECQKNNLPCFHPH 184



 Score = 29.3 bits (64), Expect(2) = 4e-61
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 768 HMQDHHHPRLTLVHMENP 821
           H    HHPR T VH+ENP
Sbjct: 182 HPHVDHHPRSTFVHVENP 199


>ref|XP_002299223.1| predicted protein [Populus trichocarpa] gi|222846481|gb|EEE84028.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  216 bits (550), Expect = 1e-53
 Identities = 126/263 (47%), Positives = 155/263 (58%), Gaps = 12/263 (4%)
 Frame = +2

Query: 194 MDDGNAELSDKLSDNVLFSNPQSSSNFQASTSVNTVT-ELXXXXXXXXXXXXXNPPGPDD 370
           MDDG  ELSD    +VL  NP SS + Q+S SV+++  E              NP GPD 
Sbjct: 1   MDDGEIELSD----HVLLPNPDSSGSLQSSASVDSLLDEFLKNTRTCTHTHTCNPLGPDI 56

Query: 371 AXXXXXXXXXXXQVFASEDD-------TNSRPKRPSGNREAVRKYREKKKAHTAYLEEEV 529
                        + + EDD       +NS+ KRP+GNREAVRKYR+KKKAHTAYLEEEV
Sbjct: 57  THTHTCYHTHTQVITSEEDDDVNNREHSNSKVKRPAGNREAVRKYRQKKKAHTAYLEEEV 116

Query: 530 KKLRLVNQQLVRKLQGQALLEAELSRLRNTLAHLKGKIDSELGSFPFQKQCSTSTVFKEG 709
           KKLR+ NQQLVRK+Q Q +LEAE+ RLR+ L  L+GKID+ELG  PFQ Q   +  FK+G
Sbjct: 117 KKLRISNQQLVRKIQQQVILEAEVLRLRSILMGLRGKIDTELGVLPFQNQGDATAAFKDG 176

Query: 710 ----LSTSRTIGLQCQNNLPCFHPHAGSSSSKANTCAYGKSMIPWEGNCQHEIVDCQVAA 877
                ST   + LQCQ +LPCFH     SSS+ N     K M  WEG CQ  I++ Q   
Sbjct: 177 NCGAQSTGGPMNLQCQTDLPCFHTQVVGSSSRVNIDGNDKLMESWEGTCQPVILNSQANM 236

Query: 878 NNMTNTEGQTRDTMDNFTSSASQ 946
           +NM  TEG   D ++   SSASQ
Sbjct: 237 DNMATTEGHAMDMVEALMSSASQ 259


>emb|CBI28617.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score =  210 bits (534), Expect = 7e-52
 Identities = 124/250 (49%), Positives = 153/250 (61%), Gaps = 13/250 (5%)
 Frame = +2

Query: 212 ELSDKLSDNVLFSNPQSSSNFQASTSVNT-VTELXXXXXXXXXXXXXNPPGPDDAXXXXX 388
           E+  +LSD+VL SNP SSSNFQ ST +++ + +              NPPGPD A     
Sbjct: 104 EIIVELSDHVLLSNPNSSSNFQGSTPIDSFLDDFLKNTRTCTHTHTCNPPGPD-AAHTHT 162

Query: 389 XXXXXXQVFASEDDTN--------SRPKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRL 544
                 QVFASE+D          S+ +RPSGNREAVRKYREKKKAHTAYLEEEVKKLRL
Sbjct: 163 CYHTHTQVFASEEDEVPNNKEHLISKVRRPSGNREAVRKYREKKKAHTAYLEEEVKKLRL 222

Query: 545 VNQQLVRKLQGQALLEAELSRLRNTLAHLKGKIDSELGSFPFQKQCSTSTVFKEG----L 712
           +NQQLV+KLQGQA+LEAE+ RLR+ L  L+GKID+ELG FPFQKQC+T+  FKEG     
Sbjct: 223 LNQQLVKKLQGQAVLEAEVLRLRSLLLDLRGKIDNELGVFPFQKQCNTTLSFKEGDCGLQ 282

Query: 713 STSRTIGLQCQNNLPCFHPHAGSSSSKANTCAYGKSMIPWEGNCQHEIVDCQVAANNMTN 892
           S S  I  +C+ +LPCFHPH                           +VDC+   N+M +
Sbjct: 283 SASGAIDPRCEMDLPCFHPHPA-------------------------VVDCRGNINDMVS 317

Query: 893 TEGQTRDTMD 922
            EG T DT++
Sbjct: 318 AEGHTMDTVE 327


Top