BLASTX nr result

ID: Glycyrrhiza24_contig00004718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004718
         (2420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containin...   706   0.0  
ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containin...   700   0.0  
ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containin...   625   e-176
ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containin...   621   e-175
ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric...   613   e-173

>ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
            [Glycine max]
          Length = 427

 Score =  706 bits (1821), Expect = 0.0
 Identities = 341/434 (78%), Positives = 365/434 (84%), Gaps = 2/434 (0%)
 Frame = -2

Query: 2044 MDVDGGNKRVYHRLGGPTGDSKNQKVCFHWQAGKCNRHPCAFLHSELPPSN--SNGTSSK 1871
            MDVDGGNKRVY+RLGG   D+K+QKVCFHWQAGKCNR+PC FLHSELP ++  +NG SSK
Sbjct: 1    MDVDGGNKRVYNRLGG---DAKHQKVCFHWQAGKCNRYPCPFLHSELPANSHHANGASSK 57

Query: 1870 RPYGPGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRGDTVCNYWVQGNC 1691
            R Y   DN             NTW                   VVV+ + VCNYW+QGNC
Sbjct: 58   RAY---DNSGFSGPRRSPSFNNTWGRGGSRGGGGAGAGAGR-GVVVKAEKVCNYWIQGNC 113

Query: 1690 SFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGSTDETVRVWDCQSG 1511
            S+GERCKFLH+WS+GDGFSLLTQLEGH+K VS I+ PSGSDKLYTGSTDET R+WDCQSG
Sbjct: 114  SYGERCKFLHTWSVGDGFSLLTQLEGHQKAVSAIAFPSGSDKLYTGSTDETARIWDCQSG 173

Query: 1510 KCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVGQVYALVVNNDML 1331
            KC+ VINLGGEVGCMISEGPWVFVGIPNFVK WNTQN  ELSL+GPVGQVYALVVNNDML
Sbjct: 174  KCVGVINLGGEVGCMISEGPWVFVGIPNFVKAWNTQNLSELSLNGPVGQVYALVVNNDML 233

Query: 1330 FAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGSMDNTIRVWNLEN 1151
            FAGTQDGSIL WKFNV  NCFEPAASLKGH+RGVVSLVVGANRLYSGSMDNTIRVWNLE 
Sbjct: 234  FAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIRVWNLET 293

Query: 1150 LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHNEENGILTLC 971
            LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVW+ATESGNLEVTYTHNEENGILTLC
Sbjct: 294  LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYTHNEENGILTLC 353

Query: 970  GMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPGSIFFTGDGTGQV 791
            GMHDSQGKP+LLC+ NDNTV LYDLPSFAERGKI TK+EVRAIQ GP  IFFTGDGTG+V
Sbjct: 354  GMHDSQGKPILLCACNDNTVHLYDLPSFAERGKILTKKEVRAIQIGPNGIFFTGDGTGEV 413

Query: 790  RVWNWIPEPTPILQ 749
            RVWNWI E T   Q
Sbjct: 414  RVWNWIAEATTTTQ 427


>ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
            [Glycine max]
          Length = 426

 Score =  700 bits (1807), Expect = 0.0
 Identities = 338/434 (77%), Positives = 364/434 (83%), Gaps = 2/434 (0%)
 Frame = -2

Query: 2044 MDVDGGNKRVYHRLGGPTGDSKNQKVCFHWQAGKCNRHPCAFLHSELPPSN--SNGTSSK 1871
            MDVDGGNKRVY+RLGG   D+K+QKVC+HWQAGKCNR+PC FLHSE P ++  +NGTSSK
Sbjct: 1    MDVDGGNKRVYNRLGG---DAKHQKVCYHWQAGKCNRYPCPFLHSESPANSHHANGTSSK 57

Query: 1870 RPYGPGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRGDTVCNYWVQGNC 1691
            R Y   DN             NTW                   VVV+ + VCNYW+QG+C
Sbjct: 58   RTY---DNSGFSGPRRSPNFNNTWGRGGGRGGGGGGGAGR--GVVVKAEKVCNYWIQGSC 112

Query: 1690 SFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGSTDETVRVWDCQSG 1511
            S+GERCKFLHSWS+GDGFSLLTQLEGH+K VS I+ PSGSDKLYTGSTDET R+WDCQ G
Sbjct: 113  SYGERCKFLHSWSVGDGFSLLTQLEGHQKAVSAIAFPSGSDKLYTGSTDETARIWDCQCG 172

Query: 1510 KCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVGQVYALVVNNDML 1331
            KC+ VINLGGEVGCMISEGPWVFVGIPNFVK WNTQN  ELSL+GPVGQVYALVVNNDML
Sbjct: 173  KCVGVINLGGEVGCMISEGPWVFVGIPNFVKAWNTQNLSELSLNGPVGQVYALVVNNDML 232

Query: 1330 FAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGSMDNTIRVWNLEN 1151
            FAGTQDGSIL WKFNV  NCFEPAASLKGH+RGVVSLVVGANRLYSGSMDNTI+VWNLE 
Sbjct: 233  FAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIKVWNLET 292

Query: 1150 LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHNEENGILTLC 971
            LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVW+ATESGNLEVTY+HNEENGILTLC
Sbjct: 293  LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYSHNEENGILTLC 352

Query: 970  GMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPGSIFFTGDGTGQV 791
            GMHDSQGKP+LLC+ NDNTV LYDLPSFAERGKI TKQEVRAIQ GP  IFFTGDGTG+V
Sbjct: 353  GMHDSQGKPILLCACNDNTVHLYDLPSFAERGKILTKQEVRAIQIGPNGIFFTGDGTGEV 412

Query: 790  RVWNWIPEPTPILQ 749
            RVWNWI E T   Q
Sbjct: 413  RVWNWIAEATTTTQ 426


>ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis
            vinifera] gi|297741123|emb|CBI31854.3| unnamed protein
            product [Vitis vinifera]
          Length = 442

 Score =  625 bits (1613), Expect = e-176
 Identities = 301/437 (68%), Positives = 342/437 (78%), Gaps = 11/437 (2%)
 Frame = -2

Query: 2044 MDVDG-GNKRVYHRLGGPTGDSKNQKVCFHWQAGKCNRHPCAFLHSELP--------PSN 1892
            MDVD  GNKRV+ RLG      K  KVC+HW+AG+CN+ PC +LH ELP        P  
Sbjct: 1    MDVDEHGNKRVFQRLGASNDSGKQHKVCYHWRAGRCNKFPCPYLHRELPAPPPQQHQPFI 60

Query: 1891 SNGTSSKRP-YGPGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRG-DTV 1718
            SNG+SSKRP  G  D+              TW                 G  V R  + +
Sbjct: 61   SNGSSSKRPNQGVHDDRSFSGARRSPNFNPTWGRVHGAGAGNRAQGSGAGNRVFRKIEKL 120

Query: 1717 CNYWVQGNCSFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGSTDET 1538
            CNYW+QGNCS+GE+CKFLHSWS+GD FS LTQLEGH+KVVSGI++PSGSDKLYTGS DET
Sbjct: 121  CNYWLQGNCSYGEKCKFLHSWSVGDCFSSLTQLEGHQKVVSGIALPSGSDKLYTGSKDET 180

Query: 1537 VRVWDCQSGKCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVGQVY 1358
            VR+WDCQSG+C  V+NLGGEVGCMISEGPW+FVGIPN VK W+TQN+ ELSL GP GQVY
Sbjct: 181  VRIWDCQSGQCTGVVNLGGEVGCMISEGPWLFVGIPNVVKAWHTQNNTELSLSGPTGQVY 240

Query: 1357 ALVVNNDMLFAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGSMDN 1178
            ALVV ND+LFAG QDG+IL WKFN ++NCFEPAASLKGHT+ V++LVVGANRLYSGSMD 
Sbjct: 241  ALVVGNDLLFAGVQDGAILAWKFNAVSNCFEPAASLKGHTQSVITLVVGANRLYSGSMDR 300

Query: 1177 TIRVWNLENLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHN 998
            +IRVWNLENLQCLQTLTEHTSVVMS+LCWDQFLLSCSLD TVKVW ATESGNLEVTYTHN
Sbjct: 301  SIRVWNLENLQCLQTLTEHTSVVMSLLCWDQFLLSCSLDGTVKVWVATESGNLEVTYTHN 360

Query: 997  EENGILTLCGMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPGSIF 818
            EE G+L LCGMHD + KPVLLCS NDNTV +YDLPSF+ERGKIF ++ +RAIQ GPG +F
Sbjct: 361  EEQGVLYLCGMHDPEAKPVLLCSCNDNTVRVYDLPSFSERGKIFAREGIRAIQIGPGGLF 420

Query: 817  FTGDGTGQVRVWNWIPE 767
            FTGDG+GQVRVWNW  E
Sbjct: 421  FTGDGSGQVRVWNWSTE 437


>ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
            [Cucumis sativus] gi|449521989|ref|XP_004168011.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            48-like [Cucumis sativus]
          Length = 432

 Score =  621 bits (1601), Expect = e-175
 Identities = 293/435 (67%), Positives = 350/435 (80%), Gaps = 9/435 (2%)
 Frame = -2

Query: 2044 MDVDGGNKRVYHRLGGPTGDSKNQKVCFHWQAGKCNRHPCAFLHSEL---PPSNSNGTS- 1877
            MDVDGG KRV+ RLG P+GDS+NQKVCFHW+AGKC+R+PC +LH EL   P + SNG + 
Sbjct: 1    MDVDGGGKRVFQRLGAPSGDSRNQKVCFHWRAGKCSRYPCPYLHRELNGPPHAASNGAAN 60

Query: 1876 --SKRPYG---PGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRGDTVCN 1712
              SKR +G      +             +TW                   ++ + + +CN
Sbjct: 61   AASKRGHGFASDDSSVSVPRRSPNFSGGSTWGRVHGGGNR----------IIRKTEKLCN 110

Query: 1711 YWVQGNCSFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGSTDETVR 1532
            +WVQGNC+FG++C++LHSWSLG+ FS LTQL+GH+KV++GI+ PSGSDKLYTGS DETVR
Sbjct: 111  FWVQGNCTFGDKCRYLHSWSLGESFSHLTQLDGHQKVITGITFPSGSDKLYTGSKDETVR 170

Query: 1531 VWDCQSGKCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVGQVYAL 1352
            VWDCQSG+C+A+INLGG+VG MI+EGPWVFVGIPN VK WN Q S +LSL GPVG VY+L
Sbjct: 171  VWDCQSGQCMAIINLGGQVGSMIAEGPWVFVGIPNCVKAWNIQTSADLSLSGPVGLVYSL 230

Query: 1351 VVNNDMLFAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGSMDNTI 1172
            VV ND+LFAGTQDGSIL WKFNV  NCFEPAASL GHT  VVSLVVGANRLYSGSMD+TI
Sbjct: 231  VVGNDLLFAGTQDGSILAWKFNVATNCFEPAASLSGHTLPVVSLVVGANRLYSGSMDHTI 290

Query: 1171 RVWNLENLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHNEE 992
            +VW+LE+LQCLQTLT+HTSVVMSVLCW+QFLLSCSLDKT+KVW ATESGNLEVTYT  E+
Sbjct: 291  KVWSLESLQCLQTLTDHTSVVMSVLCWEQFLLSCSLDKTIKVWAATESGNLEVTYTQKED 350

Query: 991  NGILTLCGMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPGSIFFT 812
            +G+LTLCGMHD  GKP+LLCS NDN+V LYDLPSF+ERGKI++K+E+R+IQAGPG IFFT
Sbjct: 351  HGLLTLCGMHDLDGKPILLCSCNDNSVRLYDLPSFSERGKIYSKEEIRSIQAGPGGIFFT 410

Query: 811  GDGTGQVRVWNWIPE 767
            GDGTGQV+VW W+ E
Sbjct: 411  GDGTGQVKVWTWLTE 425


>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
            gi|223549969|gb|EEF51456.1| F-box and wd40 domain
            protein, putative [Ricinus communis]
          Length = 445

 Score =  613 bits (1580), Expect = e-173
 Identities = 293/444 (65%), Positives = 341/444 (76%), Gaps = 12/444 (2%)
 Frame = -2

Query: 2050 LSMDVDGGN---KRVYHRLGGP-----TGDSKNQKVCFHWQAGKCNRHPCAFLHSELPPS 1895
            + +D  GGN    RV++RLGG      T D + QKVC HW+AG+CNR PC +LH ELPP 
Sbjct: 1    MDLDAQGGNTNSNRVFNRLGGAQLSSSTNDPRQQKVCHHWRAGRCNRFPCPYLHRELPPP 60

Query: 1894 ----NSNGTSSKRPYGPGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRG 1727
                 SNG SS     P                +                     V+ + 
Sbjct: 61   PPPHGSNGHSSSNNNAPSKRGFSNDSGFSGPSGSRRSGNFNNASSWGRVGNNSNKVLRKT 120

Query: 1726 DTVCNYWVQGNCSFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGST 1547
            + VCN+WVQG CS+G++C+FLHSW+LG+ FSLLTQL+GH+KVV+GI++PSGSDKLYTGS 
Sbjct: 121  EKVCNFWVQGKCSYGDKCRFLHSWNLGESFSLLTQLDGHQKVVTGIALPSGSDKLYTGSK 180

Query: 1546 DETVRVWDCQSGKCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVG 1367
            DETVRVWDCQSG+C+AVI LGGEVGCMISEGPW+FVGIPN VK WNTQ + +LSL GPVG
Sbjct: 181  DETVRVWDCQSGQCMAVIQLGGEVGCMISEGPWIFVGIPNVVKAWNTQTNTDLSLTGPVG 240

Query: 1366 QVYALVVNNDMLFAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGS 1187
            QVYALVV ND+LFAGTQDG+IL+WK+N     FEPAASL GHT  VVSLVVGANRLYSGS
Sbjct: 241  QVYALVVGNDLLFAGTQDGAILVWKYNAATFNFEPAASLPGHTVAVVSLVVGANRLYSGS 300

Query: 1186 MDNTIRVWNLENLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTY 1007
            MD++IRVWNLE LQC+QTLT+HTSVVMSVLCWDQFLLSCSLD+ +KVW ATESGNL+VTY
Sbjct: 301  MDHSIRVWNLETLQCVQTLTDHTSVVMSVLCWDQFLLSCSLDQKIKVWAATESGNLDVTY 360

Query: 1006 THNEENGILTLCGMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPG 827
            THNEE+G+LTLCGMHD +GKPVLLCS NDN+V L DLPSF+ERGKIF KQE+RAIQ GPG
Sbjct: 361  THNEEHGLLTLCGMHDLEGKPVLLCSCNDNSVRLLDLPSFSERGKIFAKQEIRAIQTGPG 420

Query: 826  SIFFTGDGTGQVRVWNWIPEPTPI 755
             +FFTGDGTGQVRVW W+ EPT I
Sbjct: 421  GLFFTGDGTGQVRVWKWVAEPTAI 444


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