BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004714
         (1614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-contain...   425   e-116
ref|XP_003517246.1| PREDICTED: methyl-CpG-binding domain-contain...   417   e-114
ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...   348   3e-93
ref|XP_002331442.1| methyl binding domain protein [Populus trich...   323   6e-86
ref|XP_002526239.1| DNA binding protein, putative [Ricinus commu...   318   3e-84

>ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Glycine max]
          Length = 309

 Score =  425 bits (1092), Expect = e-116
 Identities = 221/310 (71%), Positives = 238/310 (76%), Gaps = 16/310 (5%)
 Frame = -2

Query: 1409 MHRGKFSLTPKIQDKDLTGSSFPSYQHXXXXXXXXXXXXXXXXXXXXXXXXN-QLVLYDP 1233
            MHRGKFSLTPK + KDLTGSS  SY+H                        + QLVLYDP
Sbjct: 1    MHRGKFSLTPKNEVKDLTGSSLTSYKHSSLLDPIDVSSSSDDENDLPNDDVSNQLVLYDP 60

Query: 1232 VANGNNTVELVPDPLQCEPLLHPRSKPSSSAPRVLPSVGAFTVQCASCFKWRLIPTKEKY 1053
            VANGNN +EL PDPLQCE  L PRSKPS S PRVLPSVGAFTVQCASCFKWRLIPTKEKY
Sbjct: 61   VANGNNAIELAPDPLQCEHPLLPRSKPSHSVPRVLPSVGAFTVQCASCFKWRLIPTKEKY 120

Query: 1052 EEIREHILEQPFVCQKTRDWRPDVSCDDPEDISQDGSRIWAIDKPNIAQPPDGWQRLLRI 873
            EEIREHILEQPFVCQK R+WRP VSCDDPEDISQDGSR+WAIDKPNIAQPP GW+RLLRI
Sbjct: 121  EEIREHILEQPFVCQKAREWRPHVSCDDPEDISQDGSRVWAIDKPNIAQPPAGWERLLRI 180

Query: 872  RGEGSTKFADIYYLAPSGKRLRSMVEIQKFLMDHPEYTKDGVTLSQFSFQTPKPLQENYV 693
            R EGS+KFADIYY+APSGKRLRSMVEIQKFLM+HPEYT+DGVTLSQFSFQ P+PLQENYV
Sbjct: 181  RAEGSSKFADIYYIAPSGKRLRSMVEIQKFLMEHPEYTRDGVTLSQFSFQIPRPLQENYV 240

Query: 692  RKRPAR------------PEEVSPLAWAGPEDGANSHERRLGLPA-PCMGSDVSTP--IS 558
            RKRPAR             E+VSPLAW  PE     H RRLGLPA P M S    P  IS
Sbjct: 241  RKRPARLTSSYEVSEPVEHEQVSPLAWVDPE----GHGRRLGLPAPPFMESHDIDPISIS 296

Query: 557  RPAKKQASQR 528
            RP+K+QA+ +
Sbjct: 297  RPSKRQATHK 306


>ref|XP_003517246.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Glycine max]
          Length = 312

 Score =  417 bits (1072), Expect = e-114
 Identities = 214/313 (68%), Positives = 236/313 (75%), Gaps = 19/313 (6%)
 Frame = -2

Query: 1409 MHRGKFSLTPKIQDKDLTGSSFPSYQHXXXXXXXXXXXXXXXXXXXXXXXXN-QLVLYDP 1233
            M+ GKFSLTPK + KDLTGSSFPSY+H                        + QLVLYDP
Sbjct: 1    MYHGKFSLTPKNEVKDLTGSSFPSYKHSSQLDPIDVSSSSDDENDLPNDDVSNQLVLYDP 60

Query: 1232 VANGNNTVELVPDPLQCEPLLHPRSKPSSSAPRVLPSVGAFTVQCASCFKWRLIPTKEKY 1053
            VANGNN +EL PDPLQCEP L PRSKPS S PR LPSVG FTVQCASC KWRLIPTKEKY
Sbjct: 61   VANGNNAIELAPDPLQCEPPLLPRSKPSHSVPRALPSVGVFTVQCASCLKWRLIPTKEKY 120

Query: 1052 EEIREHILEQPFVCQKTRDWRPDVSCDDPEDISQDGSRIWAIDKPNIAQPPDGWQRLLRI 873
            EEIREHI+EQPFVCQK R+WRPDVSCDDPEDISQDGSR+WAIDKPNIAQPP GW+RLLRI
Sbjct: 121  EEIREHIIEQPFVCQKAREWRPDVSCDDPEDISQDGSRVWAIDKPNIAQPPAGWERLLRI 180

Query: 872  RGEGSTKFADIYYLAPSGKRLRSMVEIQKFLMDHPEYTKDGVTLSQFSFQTPKPLQENYV 693
            R EGS+KFADIYY+APSGKRLRSMVE+QKFLM+HPEYT+DGVTLSQFSFQ P+PLQENYV
Sbjct: 181  RAEGSSKFADIYYIAPSGKRLRSMVEVQKFLMEHPEYTRDGVTLSQFSFQIPRPLQENYV 240

Query: 692  RKRPAR------------PEEVSPLAWAGPEDGANSHERRLGL-PAPCMGS-----DVST 567
            RKR AR             ++VSPLAW  PE        RLGL P P MGS      ++ 
Sbjct: 241  RKRSARLTSSYEVSEPVEHQQVSPLAWVDPEGCGG----RLGLPPPPFMGSHDLDTTINM 296

Query: 566  PISRPAKKQASQR 528
             ISRPAK+QA+ +
Sbjct: 297  SISRPAKRQATHK 309


>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
            vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  348 bits (892), Expect = 3e-93
 Identities = 184/326 (56%), Positives = 214/326 (65%), Gaps = 28/326 (8%)
 Frame = -2

Query: 1406 HRGKFSLTPKIQDKDLTGSSFPSYQHXXXXXXXXXXXXXXXXXXXXXXXXN--------- 1254
            H GK       ++ DLTGSS P Y                          +         
Sbjct: 3    HPGKIYRKANKEENDLTGSSLPRYLDALQVPIDLSSSEEEEEDFYAEEDDDNHSYENTSN 62

Query: 1253 QLVLYDPVANGNNTVELVPDPLQCEPLLHPRSKPSSSAPRVLPSVGAFTVQCASCFKWRL 1074
            QLV+YDPVAN    VE VPDP+Q           +++  RVLPSVGAFTVQCA+CFKWRL
Sbjct: 63   QLVVYDPVANSATEVEPVPDPIQYRLPSFTGYSTTNAPSRVLPSVGAFTVQCANCFKWRL 122

Query: 1073 IPTKEKYEEIREHILEQPFVCQKTRDWRPDVSCDDPEDISQDGSRIWAIDKPNIAQPPDG 894
            IPTKEKYEEIREHILEQPFVC+  R+WRP+VSCDDP DISQDGSR+WAIDKPNIAQPP G
Sbjct: 123  IPTKEKYEEIREHILEQPFVCETAREWRPNVSCDDPADISQDGSRLWAIDKPNIAQPPAG 182

Query: 893  WQRLLRIRGEGSTKFADIYYLAPSGKRLRSMVEIQKFLMDHPEYTKDGVTLSQFSFQTPK 714
            WQRLLRIRGEGSTKFAD+YY+APSGKRLRSMVE+QK+L++HPEY   GVTLSQFSFQ PK
Sbjct: 183  WQRLLRIRGEGSTKFADVYYVAPSGKRLRSMVEVQKYLLEHPEYMVHGVTLSQFSFQIPK 242

Query: 713  PLQENYVRKRPAR-------------------PEEVSPLAWAGPEDGANSHERRLGLPAP 591
            PLQENYVRKRPAR                   P EV+PL+WAGP +  +   R  GL AP
Sbjct: 243  PLQENYVRKRPARVNAGSYDDTTSSGMSRPLEPGEVNPLSWAGPAECIDLQLRTPGLSAP 302

Query: 590  CMGSDVSTPISRPAKKQASQRSFHKD 513
               + V  P+SRP K+  ++R+  +D
Sbjct: 303  YFEAPVFDPVSRPTKQ--ARRTLPRD 326


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
            gi|222873656|gb|EEF10787.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 343

 Score =  323 bits (829), Expect = 6e-86
 Identities = 163/252 (64%), Positives = 186/252 (73%), Gaps = 13/252 (5%)
 Frame = -2

Query: 1253 QLVLYDPVANGNNTVELVPDPLQCEPLLHP--RSKPSSSAPRVLPSVGAFTVQCASCFKW 1080
            QLVLYDP+AN    +E VP P+      HP  R    +   RVLPSVGAFTVQCA CFKW
Sbjct: 64   QLVLYDPLANDAGEIEPVPQPILSH---HPFRRYSDLNVPSRVLPSVGAFTVQCAKCFKW 120

Query: 1079 RLIPTKEKYEEIREHILEQPFVCQKTRDWRPDVSCDDPEDISQDGSRIWAIDKPNIAQPP 900
            RLIPTK+KYEE+REHILE+PF C+  R+WRPD+SCDDP DI QDGSR+WAIDKPNIAQPP
Sbjct: 121  RLIPTKQKYEELREHILEEPFFCETAREWRPDISCDDPTDIDQDGSRLWAIDKPNIAQPP 180

Query: 899  DGWQRLLRIRGEGSTKFADIYYLAPSGKRLRSMVEIQKFLMDHPEYTKDGVTLSQFSFQT 720
             GWQRLLRIRGEGSTKFAD+YY APSGKRLRSMVEIQK+L++HPEY +DG+TL+QFSFQ 
Sbjct: 181  PGWQRLLRIRGEGSTKFADVYYQAPSGKRLRSMVEIQKYLIEHPEYMRDGITLTQFSFQI 240

Query: 719  PKPLQENYVRKRPAR-------PEEVSPLAWAGPEDGANSHERRLG----LPAPCMGSDV 573
            PKPLQENYVRK+  R       P E +PL W GP D     E +LG    LP P + S  
Sbjct: 241  PKPLQENYVRKKRPRLSASCLEPGEANPLKWVGPGD---CTELQLGRPAILPPPLIQSSA 297

Query: 572  STPISRPAKKQA 537
              P   P KK+A
Sbjct: 298  YLPFYWPVKKKA 309


>ref|XP_002526239.1| DNA binding protein, putative [Ricinus communis]
            gi|223534433|gb|EEF36136.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 271

 Score =  318 bits (814), Expect = 3e-84
 Identities = 148/193 (76%), Positives = 166/193 (86%)
 Frame = -2

Query: 1253 QLVLYDPVANGNNTVELVPDPLQCEPLLHPRSKPSSSAPRVLPSVGAFTVQCASCFKWRL 1074
            Q+VLYDPVANG+  +E+VP PLQC P    R        RVLPSVGAFTVQCA CFKWRL
Sbjct: 62   QIVLYDPVANGSGQIEIVPQPLQCRPHPSARRPGFLMHSRVLPSVGAFTVQCAKCFKWRL 121

Query: 1073 IPTKEKYEEIREHILEQPFVCQKTRDWRPDVSCDDPEDISQDGSRIWAIDKPNIAQPPDG 894
            IPTKEKYEEIREHILEQPF C+  R+WRPD+SC+DP DISQDGSR+WAIDKPNIAQPP G
Sbjct: 122  IPTKEKYEEIREHILEQPFYCETAREWRPDISCNDPADISQDGSRLWAIDKPNIAQPPRG 181

Query: 893  WQRLLRIRGEGSTKFADIYYLAPSGKRLRSMVEIQKFLMDHPEYTKDGVTLSQFSFQTPK 714
            WQRLLRIRGEGS+KFAD+YY APSGKRLRSMVEI+++LM +PEY ++GV LSQFSFQ P+
Sbjct: 182  WQRLLRIRGEGSSKFADVYYQAPSGKRLRSMVEIERYLMANPEYVQNGVKLSQFSFQIPR 241

Query: 713  PLQENYVRKRPAR 675
            PLQENYVRKRPAR
Sbjct: 242  PLQENYVRKRPAR 254