BLASTX nr result

ID: Glycyrrhiza24_contig00004709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004709
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49535.1| unknown [Lotus japonicus]                              284   2e-74
ref|NP_001236901.1| nonclathrin coat protein zeta2-COP [Glycine ...   275   8e-72
ref|NP_001237435.1| uncharacterized protein LOC100527022 [Glycin...   273   3e-71
gb|ACU14304.1| unknown [Glycine max]                                  269   6e-70
emb|CBI30821.3| unnamed protein product [Vitis vinifera]              269   7e-70

>gb|AFK49535.1| unknown [Lotus japonicus]
          Length = 182

 Score =  284 bits (727), Expect = 2e-74
 Identities = 148/182 (81%), Positives = 152/182 (83%)
 Frame = +3

Query: 102 MSPPPNGSCPSVKNILLLDSDGKRVAVKYFSDDWPTNGAKETFEKLVFTKTQKTNARTEA 281
           MSPPPN  CPSVKNILLLDSDGKRVAVKYFSDDWPTN A+E FEKLVFTKTQKTNARTEA
Sbjct: 1   MSPPPNELCPSVKNILLLDSDGKRVAVKYFSDDWPTNSAQEAFEKLVFTKTQKTNARTEA 60

Query: 282 EIAMFENNIVVYKFVQDLHFFVTGGDDENELILATVLQAFFDSVGLLLRGNVDKREAXXX 461
           EI M EN IVVYKFVQDLHFFVTGGD+ENELILATVLQAFFDSVGLLLRGNVDK+EA   
Sbjct: 61  EITMLENYIVVYKFVQDLHFFVTGGDEENELILATVLQAFFDSVGLLLRGNVDKKEALEN 120

Query: 462 XXXXXXXXXXXXXXXXXXXTDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSL 641
                              TDPNVIAGKVASNSIDSGAPLSEQTL+QALATAREH ARSL
Sbjct: 121 LDLILLCIDEIIDGGIILETDPNVIAGKVASNSIDSGAPLSEQTLTQALATAREHFARSL 180

Query: 642 LK 647
           LK
Sbjct: 181 LK 182


>ref|NP_001236901.1| nonclathrin coat protein zeta2-COP [Glycine max]
           gi|7363244|dbj|BAA93004.1| nonclathrin coat protein
           zeta2-COP [Glycine max]
          Length = 179

 Score =  275 bits (704), Expect = 8e-72
 Identities = 143/175 (81%), Positives = 149/175 (85%)
 Frame = +3

Query: 123 SCPSVKNILLLDSDGKRVAVKYFSDDWPTNGAKETFEKLVFTKTQKTNARTEAEIAMFEN 302
           +CPSVKN+LLLDSDGKRVAVKYFS+DWPTN AKE FEK+VF KTQKTNARTEAEIAMFEN
Sbjct: 5   TCPSVKNVLLLDSDGKRVAVKYFSEDWPTNSAKENFEKVVFNKTQKTNARTEAEIAMFEN 64

Query: 303 NIVVYKFVQDLHFFVTGGDDENELILATVLQAFFDSVGLLLRGNVDKREAXXXXXXXXXX 482
           NIV+YKFVQDLHFFVTGGD ENELILATVLQAFFDSVGLLLRGNVDK+EA          
Sbjct: 65  NIVLYKFVQDLHFFVTGGDYENELILATVLQAFFDSVGLLLRGNVDKKEALENLDLILLC 124

Query: 483 XXXXXXXXXXXXTDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 647
                       TDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK
Sbjct: 125 IDEIVDGGIILETDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 179


>ref|NP_001237435.1| uncharacterized protein LOC100527022 [Glycine max]
           gi|255631384|gb|ACU16059.1| unknown [Glycine max]
          Length = 179

 Score =  273 bits (699), Expect = 3e-71
 Identities = 143/175 (81%), Positives = 148/175 (84%)
 Frame = +3

Query: 123 SCPSVKNILLLDSDGKRVAVKYFSDDWPTNGAKETFEKLVFTKTQKTNARTEAEIAMFEN 302
           +CPSVKN+LLLDSDGKRVAVKYFS+DW TN AKE FEK+VF KTQKTNARTEAEIAMFEN
Sbjct: 5   TCPSVKNVLLLDSDGKRVAVKYFSEDWATNSAKENFEKVVFNKTQKTNARTEAEIAMFEN 64

Query: 303 NIVVYKFVQDLHFFVTGGDDENELILATVLQAFFDSVGLLLRGNVDKREAXXXXXXXXXX 482
           NIVVYKFVQDLHFFVTGGD ENELILATVLQAFFDSVGLLLRGNVDK+EA          
Sbjct: 65  NIVVYKFVQDLHFFVTGGDYENELILATVLQAFFDSVGLLLRGNVDKKEALENLDLILLC 124

Query: 483 XXXXXXXXXXXXTDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 647
                       TDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK
Sbjct: 125 IDEIVDGGIILETDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 179


>gb|ACU14304.1| unknown [Glycine max]
          Length = 178

 Score =  269 bits (688), Expect = 6e-70
 Identities = 142/175 (81%), Positives = 148/175 (84%)
 Frame = +3

Query: 123 SCPSVKNILLLDSDGKRVAVKYFSDDWPTNGAKETFEKLVFTKTQKTNARTEAEIAMFEN 302
           +CPSVKN+LLLDSDGKRVAVKYFS+DWPTN AKE FEK+VF KTQKTNARTE EIAMFEN
Sbjct: 5   TCPSVKNVLLLDSDGKRVAVKYFSEDWPTNSAKENFEKVVFNKTQKTNARTE-EIAMFEN 63

Query: 303 NIVVYKFVQDLHFFVTGGDDENELILATVLQAFFDSVGLLLRGNVDKREAXXXXXXXXXX 482
           NIV+YKFVQDLHFFVTGGD ENELILATVLQAFFDSVGLLLRGNVDK+EA          
Sbjct: 64  NIVLYKFVQDLHFFVTGGDYENELILATVLQAFFDSVGLLLRGNVDKKEALENLDLILLC 123

Query: 483 XXXXXXXXXXXXTDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 647
                       TDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK
Sbjct: 124 IDEIVDGGIILETDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 178


>emb|CBI30821.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  269 bits (687), Expect = 7e-70
 Identities = 139/175 (79%), Positives = 148/175 (84%)
 Frame = +3

Query: 123 SCPSVKNILLLDSDGKRVAVKYFSDDWPTNGAKETFEKLVFTKTQKTNARTEAEIAMFEN 302
           SCPSVKNILLLDS+GKRVAVKY+ DDWPTN AKETFEK VF+KTQKTNARTEAEIAMFEN
Sbjct: 26  SCPSVKNILLLDSEGKRVAVKYYCDDWPTNNAKETFEKSVFSKTQKTNARTEAEIAMFEN 85

Query: 303 NIVVYKFVQDLHFFVTGGDDENELILATVLQAFFDSVGLLLRGNVDKREAXXXXXXXXXX 482
           NIVVYKFVQDLHFFVTGG+DENELILATVLQ FFD+VGLLLRGNVDK+EA          
Sbjct: 86  NIVVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEALENLDLILLC 145

Query: 483 XXXXXXXXXXXXTDPNVIAGKVASNSIDSGAPLSEQTLSQALATAREHLARSLLK 647
                       TD NVIAGKVAS+S+DSGAPLSEQT+SQALATAREHLARSLLK
Sbjct: 146 LDEIIDGGIVLETDANVIAGKVASHSLDSGAPLSEQTISQALATAREHLARSLLK 200


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