BLASTX nr result

ID: Glycyrrhiza24_contig00004681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004681
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622718.1| D-amino acid dehydrogenase small subunit [Me...   461   e-127
gb|AFK38871.1| unknown [Medicago truncatula]                          456   e-126
ref|XP_003532240.1| PREDICTED: D-amino acid dehydrogenase small ...   433   e-119
ref|XP_002527265.1| fad oxidoreductase, putative [Ricinus commun...   352   8e-95
ref|XP_002865635.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   330   3e-88

>ref|XP_003622718.1| D-amino acid dehydrogenase small subunit [Medicago truncatula]
           gi|355497733|gb|AES78936.1| D-amino acid dehydrogenase
           small subunit [Medicago truncatula]
          Length = 469

 Score =  461 bits (1185), Expect = e-127
 Identities = 222/261 (85%), Positives = 242/261 (92%)
 Frame = +2

Query: 2   LDAHRTVAYIEKANRNFASKGRYAEFYDDPVTCFIRSDSNRDVEAVQTSKNTLYSKKAII 181
           LDAHRTVAYIEK NRNFASKGRYAEFYDDPV CFIRSD N  VEAVQTSKNTLYSKKA+I
Sbjct: 209 LDAHRTVAYIEKGNRNFASKGRYAEFYDDPVKCFIRSDCNGGVEAVQTSKNTLYSKKAVI 268

Query: 182 VAAGCWTGCLMQDLCRNWGMELHVPVRPRKGHLLALQNFDFLQLNHGLMEAGYVDHPTMS 361
           VAAGCWTG LMQDL RNWGME HVPVRPRKGHLLALQNF+ LQLNHGLMEAGYVDHP++S
Sbjct: 269 VAAGCWTGSLMQDLFRNWGMEFHVPVRPRKGHLLALQNFNSLQLNHGLMEAGYVDHPSIS 328

Query: 362 GLESSDHGRNLSISMTATVDAAGNVLIGSSREFVGFSTDSDESVISHMWKRAGEFFPKLR 541
            LESSDHGR+LS+SMTAT+DAAGN+L+GSSREF GF+TD DESVI+H+WKR G++FPKLR
Sbjct: 329 DLESSDHGRDLSVSMTATIDAAGNLLVGSSREFAGFNTDLDESVITHIWKRVGDYFPKLR 388

Query: 542 MLSLSDPSASRKVRVGLRPYMPDGKPLIGPVPGLSNVYLAAGHEGSGLSMALGTAEMVVD 721
            LS+SD S SRKVR+GLRPYMPDGKP+IGPV GLSNVYLAAGHEG GLSMALGTAEMVVD
Sbjct: 389 SLSVSDLSTSRKVRIGLRPYMPDGKPVIGPVSGLSNVYLAAGHEGGGLSMALGTAEMVVD 448

Query: 722 MVLGRPGKVDSTPYAVDRVLD 784
           +VLGRPGKVDS P+AVDRVL+
Sbjct: 449 VVLGRPGKVDSAPFAVDRVLE 469


>gb|AFK38871.1| unknown [Medicago truncatula]
          Length = 469

 Score =  456 bits (1174), Expect = e-126
 Identities = 221/261 (84%), Positives = 240/261 (91%)
 Frame = +2

Query: 2   LDAHRTVAYIEKANRNFASKGRYAEFYDDPVTCFIRSDSNRDVEAVQTSKNTLYSKKAII 181
           LDAHRTVAYIEK NRNFASKGRYAEFYDDPV CFIRSD N  VEAVQTSKNTLYSKKA+I
Sbjct: 209 LDAHRTVAYIEKGNRNFASKGRYAEFYDDPVKCFIRSDCNGGVEAVQTSKNTLYSKKAVI 268

Query: 182 VAAGCWTGCLMQDLCRNWGMELHVPVRPRKGHLLALQNFDFLQLNHGLMEAGYVDHPTMS 361
           VAAGCWTG LMQDL RNWGME HVPVRPRKGHLLALQNF+ LQLNHGLMEAGYVDHP++S
Sbjct: 269 VAAGCWTGSLMQDLFRNWGMEFHVPVRPRKGHLLALQNFNSLQLNHGLMEAGYVDHPSIS 328

Query: 362 GLESSDHGRNLSISMTATVDAAGNVLIGSSREFVGFSTDSDESVISHMWKRAGEFFPKLR 541
            LESSDHGR+LS+SMTAT+DAAGN+L+GSSREF GF+TD DESVI+H+WKR G++FPKLR
Sbjct: 329 DLESSDHGRDLSVSMTATIDAAGNLLVGSSREFAGFNTDLDESVITHIWKRVGDYFPKLR 388

Query: 542 MLSLSDPSASRKVRVGLRPYMPDGKPLIGPVPGLSNVYLAAGHEGSGLSMALGTAEMVVD 721
            LS+SD S SRKV +GLRPYMPDGKP+IGPV GLSNVYLAAGHEG GLSMALGTAEMVVD
Sbjct: 389 SLSVSDLSTSRKVGIGLRPYMPDGKPVIGPVSGLSNVYLAAGHEGGGLSMALGTAEMVVD 448

Query: 722 MVLGRPGKVDSTPYAVDRVLD 784
            VLGRPGKVDS P+AVDRVL+
Sbjct: 449 GVLGRPGKVDSAPFAVDRVLE 469


>ref|XP_003532240.1| PREDICTED: D-amino acid dehydrogenase small subunit-like [Glycine
           max]
          Length = 465

 Score =  433 bits (1114), Expect = e-119
 Identities = 205/260 (78%), Positives = 238/260 (91%)
 Frame = +2

Query: 2   LDAHRTVAYIEKANRNFASKGRYAEFYDDPVTCFIRSDSNRDVEAVQTSKNTLYSKKAII 181
           +DA+RTVAYIEK NR+FASKGRY EFYDDPV CFIRSDSN +V+AVQTSKNT+YSKKA+I
Sbjct: 205 IDAYRTVAYIEKTNRSFASKGRYTEFYDDPVKCFIRSDSNGEVKAVQTSKNTIYSKKAVI 264

Query: 182 VAAGCWTGCLMQDLCRNWGMELHVPVRPRKGHLLALQNFDFLQLNHGLMEAGYVDHPTMS 361
           VAAGCWTG LMQDL RNWGM+LHVPV PRKGHLL +QNF+FLQ+NHGLMEA Y++HPT+S
Sbjct: 265 VAAGCWTGSLMQDLFRNWGMDLHVPVMPRKGHLLVVQNFNFLQMNHGLMEADYLNHPTIS 324

Query: 362 GLESSDHGRNLSISMTATVDAAGNVLIGSSREFVGFSTDSDESVISHMWKRAGEFFPKLR 541
           G ES DH +NLS+SM A++DAAGN+L+GSSREFVGF+T+ DESV+S++WKR GEFFPKL+
Sbjct: 325 GSESPDHQKNLSVSMVASIDAAGNLLLGSSREFVGFNTNLDESVVSYIWKRVGEFFPKLK 384

Query: 542 MLSLSDPSASRKVRVGLRPYMPDGKPLIGPVPGLSNVYLAAGHEGSGLSMALGTAEMVVD 721
            L LSD SASRKVR+GLRPYMP+GKP+IGPVPGLSNVYLAAGHEGSGL MALGTAEM+V+
Sbjct: 385 TLPLSDLSASRKVRIGLRPYMPNGKPVIGPVPGLSNVYLAAGHEGSGLLMALGTAEMIVE 444

Query: 722 MVLGRPGKVDSTPYAVDRVL 781
           MVLG P KVDSTP+AV +VL
Sbjct: 445 MVLGYPAKVDSTPFAVQKVL 464


>ref|XP_002527265.1| fad oxidoreductase, putative [Ricinus communis]
            gi|223533358|gb|EEF35109.1| fad oxidoreductase, putative
            [Ricinus communis]
          Length = 489

 Score =  352 bits (903), Expect = 8e-95
 Identities = 171/264 (64%), Positives = 210/264 (79%), Gaps = 8/264 (3%)
 Frame = +2

Query: 2    LDAHRTVAYIEKANRNFASKGRYAEFYDDPVTCFIRSDSNRDVEAVQTSKNTLYSKKAII 181
            LDAHRTVA+IEKANR FA+KGRYAEFY DPV   +RS S+ ++EAVQTSKNTLYSKKAI+
Sbjct: 223  LDAHRTVAFIEKANRYFATKGRYAEFYHDPVISLLRSSSSGEIEAVQTSKNTLYSKKAIV 282

Query: 182  VAAGCWTGCLMQDLCRNWGMELHVPVRPRKGHLLALQNFDFLQLNHGLMEAGYVDHP--- 352
            VAAGCW+G LM DL R + +  ++PV+PRKGHLL L++F  L LNHG+MEAGYVDH    
Sbjct: 283  VAAGCWSGSLMHDLFREYDIVFNIPVKPRKGHLLVLESFGSLTLNHGVMEAGYVDHQGAG 342

Query: 353  -----TMSGLESSDHGRNLSISMTATVDAAGNVLIGSSREFVGFSTDSDESVISHMWKRA 517
                  +SGL   DH +NLS+SMTAT+D  GN+++GSSREF GFST +DES++ H+W RA
Sbjct: 343  VNCTSAVSGL--FDHKKNLSVSMTATMDVMGNLVLGSSREFSGFSTQADESIVGHIWNRA 400

Query: 518  GEFFPKLRMLSLSDPSASRKVRVGLRPYMPDGKPLIGPVPGLSNVYLAAGHEGSGLSMAL 697
            GEFFPKL+ + L D +ASRK+R+GLRPYMPDGKP+IG +P   NV +A GHEG GLS+AL
Sbjct: 401  GEFFPKLKEVYLGDLTASRKLRIGLRPYMPDGKPVIGSIPDFPNVLIATGHEGGGLSLAL 460

Query: 698  GTAEMVVDMVLGRPGKVDSTPYAV 769
            GTAEMV DMVLG PG V+  P++V
Sbjct: 461  GTAEMVADMVLGNPGTVNYAPFSV 484


>ref|XP_002865635.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
           gi|297311470|gb|EFH41894.1| oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 458

 Score =  330 bits (846), Expect = 3e-88
 Identities = 165/257 (64%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = +2

Query: 2   LDAHRTVAYIEKANRNFASKGRYAEFYDDPVTCFIRSDS-NRDVEAVQTSKNTLYSKKAI 178
           LDAHR VAYIEK NR FA +GRYAEFY +PV   IRS+  + +V  VQTSK  LY KKA 
Sbjct: 197 LDAHRAVAYIEKGNREFAPEGRYAEFYHEPVIGLIRSNGRSTEVAGVQTSKRNLYGKKAT 256

Query: 179 IVAAGCWTGCLMQDLCRNWGMELHVPVRPRKGHLLALQNFDFLQLNHGLMEAGYVDHPTM 358
           IVAAGCW+G LM +L ++  + L VPV+PRKGHLL ++NFD   LNHGLMEAGY +H + 
Sbjct: 257 IVAAGCWSGSLMHELLKDCNISLDVPVKPRKGHLLVVENFDSFHLNHGLMEAGYTNHQSA 316

Query: 359 SGLESSDHGRNLSISMTATVDAAGNVLIGSSREFVGFSTDSDESVISHMWKRAGEFFPKL 538
           S        R LSISMTAT+D +GN+++GSSREFVGF T++DE +I  +W+RA EFFPKL
Sbjct: 317 SAPGLDVEERMLSISMTATMDTSGNLILGSSREFVGFDTEADEFIIRCIWERAAEFFPKL 376

Query: 539 RMLSLSDPSASRKVRVGLRPYMPDGKPLIGPVPGLSNVYLAAGHEGSGLSMALGTAEMVV 718
           R +SL D   +RKVRVGLRPYMPDGKP+IG VPGL N+YLAAGHEG GLSMAL TAEMV 
Sbjct: 377 RDISLEDFIRNRKVRVGLRPYMPDGKPVIGSVPGLQNLYLAAGHEGGGLSMALATAEMVT 436

Query: 719 DMVLGRPGKVDSTPYAV 769
           DMVLG+P +VDS+ + V
Sbjct: 437 DMVLGKPEQVDSSAFGV 453


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