BLASTX nr result

ID: Glycyrrhiza24_contig00004666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004666
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533112.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RN...   337   2e-90
ref|XP_003550594.1| PREDICTED: uncharacterized protein LOC100787...   285   9e-75
ref|XP_002307982.1| predicted protein [Populus trichocarpa] gi|2...   252   7e-65
gb|AFK49467.1| unknown [Lotus japonicus]                              248   2e-63
ref|NP_001239919.1| uncharacterized protein LOC100778294 [Glycin...   246   5e-63

>ref|XP_003533112.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA small subunit
           methyltransferase NEP1-like [Glycine max]
          Length = 191

 Score =  337 bits (865), Expect = 2e-90
 Identities = 171/205 (83%), Positives = 181/205 (88%), Gaps = 2/205 (0%)
 Frame = -1

Query: 624 VRSPAIFILDNASLKKGLVRKNWKILNSDEDAQFLLKQKKNLN--DYRPDIIHEALRCIL 451
           +RSPAIFILDNASLKKGLV+K WKILNSDEDA FL+KQKKNLN  DYRPDIIHEALRCIL
Sbjct: 1   MRSPAIFILDNASLKKGLVKKKWKILNSDEDAXFLMKQKKNLNLNDYRPDIIHEALRCIL 60

Query: 450 DSPLNKAGMVGAVYVKIDQGIVFEVKPHVRIPRTCKRFCGVIMELLQKSSVRAKDTNEVL 271
           DSPLNKAGMVGA+YVK+DQ  VFEVKPHVRIPRTC RFCGVI+ELL              
Sbjct: 61  DSPLNKAGMVGAIYVKMDQRGVFEVKPHVRIPRTCNRFCGVIIELL-------------- 106

Query: 270 LRAIEEPITRHLPVNSHIVGLSYTSEKLVDIEKYVSVCSNDLSPVFVVGAMVNGKVKGDY 91
           LR +EEPITRHLPVNSHIVGLSYTSEKLVDIE+YVSV SNDLSPVFVVG MVNGKVKGDY
Sbjct: 107 LRVVEEPITRHLPVNSHIVGLSYTSEKLVDIEEYVSVWSNDLSPVFVVGTMVNGKVKGDY 166

Query: 90  MHDYISVSEYPLAAKYCLGLICEAL 16
           MHDYIS+SEYPLAAKYCLG+ICEAL
Sbjct: 167 MHDYISISEYPLAAKYCLGMICEAL 191


>ref|XP_003550594.1| PREDICTED: uncharacterized protein LOC100787336 [Glycine max]
          Length = 457

 Score =  285 bits (729), Expect = 9e-75
 Identities = 142/167 (85%), Positives = 154/167 (92%)
 Frame = -1

Query: 630 QNVRSPAIFILDNASLKKGLVRKNWKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCIL 451
           +NV+SPAIFILDNASLKKGLVRK WKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCIL
Sbjct: 290 RNVKSPAIFILDNASLKKGLVRKKWKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCIL 349

Query: 450 DSPLNKAGMVGAVYVKIDQGIVFEVKPHVRIPRTCKRFCGVIMELLQKSSVRAKDTNEVL 271
           DSPLNKAGMVGA+YVKIDQG +FEVKPHV++P+TC RFCGVIM+LLQKS VRAK TNEVL
Sbjct: 350 DSPLNKAGMVGAIYVKIDQGGMFEVKPHVQLPQTCSRFCGVIMDLLQKSLVRAKHTNEVL 409

Query: 270 LRAIEEPITRHLPVNSHIVGLSYTSEKLVDIEKYVSVCSNDLSPVFV 130
           L  +EEPIT HLPVNS+ VGLS TSEK VDIE+YVS+ SNDLS VFV
Sbjct: 410 LHVVEEPITHHLPVNSYTVGLSSTSEKSVDIEEYVSLWSNDLSLVFV 456


>ref|XP_002307982.1| predicted protein [Populus trichocarpa] gi|222853958|gb|EEE91505.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  252 bits (644), Expect = 7e-65
 Identities = 128/237 (54%), Positives = 178/237 (75%), Gaps = 1/237 (0%)
 Frame = -1

Query: 708 DEEKDVEKEGIASNDGILSSPLVHSPQNVRSPA-IFILDNASLKKGLVRKNWKILNSDED 532
           +EEK+++  G+   +GI   P+V S Q  + P  IF+L+ ASL+   V K+++ILNS+E 
Sbjct: 51  EEEKEMQLPGV--EEGI---PIVPSHQTGKKPGVIFVLEKASLEVAKVGKSYQILNSEEH 105

Query: 531 AQFLLKQKKNLNDYRPDIIHEALRCILDSPLNKAGMVGAVYVKIDQGIVFEVKPHVRIPR 352
           A FL + KKN  DYRPDII++AL  ILDSPLNKAG + AVYVK D+G++FEVKPHVRIPR
Sbjct: 106 ANFLRRNKKNPADYRPDIIYQALLSILDSPLNKAGRLRAVYVKTDKGVLFEVKPHVRIPR 165

Query: 351 TCKRFCGVIMELLQKSSVRAKDTNEVLLRAIEEPITRHLPVNSHIVGLSYTSEKLVDIEK 172
           T KRF G++++LLQK S+ A    E LLR I+ P+T++LP+NS  +G S++SEKLV +EK
Sbjct: 166 TYKRFAGIMLQLLQKLSITAVGNREKLLRVIKNPVTQYLPLNSRKIGFSHSSEKLVQMEK 225

Query: 171 YVSVCSNDLSPVFVVGAMVNGKVKGDYMHDYISVSEYPLAAKYCLGLICEALEQKWK 1
           YV+   +D   VFVVGAM +GK++ DY+ D+ISVSEYPL+A +C+  +CEA+ +KW+
Sbjct: 226 YVAGVGDDTDLVFVVGAMSHGKIECDYVDDFISVSEYPLSAAWCIARVCEAVSKKWR 282


>gb|AFK49467.1| unknown [Lotus japonicus]
          Length = 272

 Score =  248 bits (632), Expect = 2e-63
 Identities = 133/262 (50%), Positives = 182/262 (69%), Gaps = 11/262 (4%)
 Frame = -1

Query: 753 RKRVEKQTPNFTISKDEEKDVEK--------EGIASN--DGILSSPLVHSPQNVRSP-AI 607
           RKR +K+   +   +DE++ V+         E  A+N  D ++  P++ S     +P  I
Sbjct: 10  RKRKDKEA-KYDREEDEDEQVQPKRPMLQNAEVAAANEEDELVGIPIMPSDHKSDNPNVI 68

Query: 606 FILDNASLKKGLVRKNWKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCILDSPLNKAG 427
           FIL+ ASL+   V K +++LNSD+ A FL K  KN  DYRPDI H+AL  ILDSPLNKAG
Sbjct: 69  FILERASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQALLSILDSPLNKAG 128

Query: 426 MVGAVYVKIDQGIVFEVKPHVRIPRTCKRFCGVIMELLQKSSVRAKDTNEVLLRAIEEPI 247
            + AVY+K ++G++ EVKP+VRIPRT KRF GV+++LLQK S+ A   +E LLR I+ P+
Sbjct: 129 RLQAVYIKTEKGVLIEVKPYVRIPRTFKRFSGVMLQLLQKLSISAAGKHEKLLRTIKNPV 188

Query: 246 TRHLPVNSHIVGLSYTSEKLVDIEKYVSVCSNDLSPVFVVGAMVNGKVKGDYMHDYISVS 67
           T++LPVNS  +GLS++SEKLV++  YVS   +D++ VFVVGAM +GKV+ DY  DYI+VS
Sbjct: 189 TQYLPVNSRKIGLSFSSEKLVNMNDYVSTVPSDMNLVFVVGAMAHGKVETDYTEDYIAVS 248

Query: 66  EYPLAAKYCLGLICEALEQKWK 1
            YPL+A YC+  IC ALE KWK
Sbjct: 249 GYPLSAAYCITRICNALEAKWK 270


>ref|NP_001239919.1| uncharacterized protein LOC100778294 [Glycine max]
           gi|255636941|gb|ACU18803.1| unknown [Glycine max]
          Length = 282

 Score =  246 bits (628), Expect = 5e-63
 Identities = 125/252 (49%), Positives = 174/252 (69%), Gaps = 5/252 (1%)
 Frame = -1

Query: 741 EKQTPNFTISKDEEKDVEKEGIAS----NDGILSSPLVHSPQNVRSP-AIFILDNASLKK 577
           E+  P  T+ + E    E+E   +    +DG+   P+  S  N   P  IFIL+ ASL+ 
Sbjct: 29  EETQPKKTVVEVEHNQEEEEETPAPAPEDDGLSGIPIAPSANNTNKPNVIFILEKASLEV 88

Query: 576 GLVRKNWKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCILDSPLNKAGMVGAVYVKID 397
             V K +++LNSD+ A FL K  KN  DYRPDI H++L  ILDSPLNKAG + +VY++ +
Sbjct: 89  AKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQSLLSILDSPLNKAGRLRSVYIRTE 148

Query: 396 QGIVFEVKPHVRIPRTCKRFCGVIMELLQKSSVRAKDTNEVLLRAIEEPITRHLPVNSHI 217
           +G++ EVKP VRIPRT KRF GV++ELLQK S+ A    E LLR I+ P+T++LP+NS  
Sbjct: 149 KGVLIEVKPFVRIPRTFKRFAGVMLELLQKLSISAVGKREKLLRTIKNPVTQYLPINSRK 208

Query: 216 VGLSYTSEKLVDIEKYVSVCSNDLSPVFVVGAMVNGKVKGDYMHDYISVSEYPLAAKYCL 37
           +GLSY+SEKLVD++ YVS  ++++  VFVVGAM +GK++ DY  DY+++S YPL+A YC+
Sbjct: 209 IGLSYSSEKLVDMDDYVSTVTSNMDLVFVVGAMAHGKIETDYTEDYVAISGYPLSAAYCI 268

Query: 36  GLICEALEQKWK 1
             I  ALE+KWK
Sbjct: 269 TRITGALERKWK 280


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