BLASTX nr result

ID: Glycyrrhiza24_contig00004662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004662
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529537.1| PREDICTED: 60S ribosomal protein L29-1-like ...   131   5e-29
ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatu...   130   8e-29
ref|XP_003546330.1| PREDICTED: 60S ribosomal protein L29-1 [Glyc...   129   2e-28
ref|XP_002519200.1| 60S ribosomal protein L29, putative [Ricinus...   128   4e-28
gb|AFK45608.1| unknown [Medicago truncatula]                          128   5e-28

>ref|XP_003529537.1| PREDICTED: 60S ribosomal protein L29-1-like [Glycine max]
           gi|356529227|ref|XP_003533197.1| PREDICTED: 60S
           ribosomal protein L29-1-like [Glycine max]
           gi|356564681|ref|XP_003550578.1| PREDICTED: 60S
           ribosomal protein L29-1-like [Glycine max]
          Length = 61

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/61 (100%), Positives = 61/61 (100%)
 Frame = -3

Query: 431 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEE 252
           MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEE
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEE 60

Query: 251 E 249
           E
Sbjct: 61  E 61


>ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatula]
           gi|355510808|gb|AES91950.1| 60S ribosomal protein L29
           [Medicago truncatula]
          Length = 445

 Score =  130 bits (328), Expect = 8e-29
 Identities = 61/67 (91%), Positives = 63/67 (94%)
 Frame = -3

Query: 449 FSLHYEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSG 270
           F +  EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK+G
Sbjct: 379 FKVLNEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNG 438

Query: 269 ETATEEE 249
           E ATEEE
Sbjct: 439 EIATEEE 445



 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/70 (85%), Positives = 64/70 (91%)
 Frame = -3

Query: 458 TSTFSLHYEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNK 279
           +ST S   EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNK
Sbjct: 128 SSTASSELEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNK 187

Query: 278 KSGETATEEE 249
           K+GE A+ E+
Sbjct: 188 KNGEVASAED 197


>ref|XP_003546330.1| PREDICTED: 60S ribosomal protein L29-1 [Glycine max]
          Length = 61

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/61 (98%), Positives = 60/61 (98%)
 Frame = -3

Query: 431 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEE 252
           MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGE ATEE
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGEIATEE 60

Query: 251 E 249
           E
Sbjct: 61  E 61


>ref|XP_002519200.1| 60S ribosomal protein L29, putative [Ricinus communis]
           gi|223541515|gb|EEF43064.1| 60S ribosomal protein L29,
           putative [Ricinus communis]
          Length = 61

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/61 (98%), Positives = 60/61 (98%)
 Frame = -3

Query: 431 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEE 252
           MAKSKNHTAHNQSYKAHKNGIKKPKR RHTSTKGMDPKFLRNQRYARKHNKKSGETATEE
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRQRHTSTKGMDPKFLRNQRYARKHNKKSGETATEE 60

Query: 251 E 249
           E
Sbjct: 61  E 61


>gb|AFK45608.1| unknown [Medicago truncatula]
          Length = 61

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/61 (96%), Positives = 60/61 (98%)
 Frame = -3

Query: 431 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEE 252
           MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKK+GE ATEE
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNGEIATEE 60

Query: 251 E 249
           E
Sbjct: 61  E 61


Top