BLASTX nr result

ID: Glycyrrhiza24_contig00004652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004652
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524306.1| PREDICTED: uncharacterized protein LOC100778...    74   2e-11
ref|XP_003532353.1| PREDICTED: uncharacterized protein LOC100776...    62   6e-08
gb|ABK95386.1| unknown [Populus trichocarpa]                           57   3e-06
ref|XP_003516871.1| PREDICTED: uncharacterized protein LOC100788...    55   1e-05

>ref|XP_003524306.1| PREDICTED: uncharacterized protein LOC100778517 [Glycine max]
          Length = 593

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/81 (53%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
 Frame = +3

Query: 30  MAVVFWALVLAILCYPLASINAQLHASAPSKLSTSTPVAPSKLPTTTPNAPFKLPSATS- 206
           MA V W L LA LCYPLA+INAQ     PS    STP APS LPTTTPNA   LP+ T+ 
Sbjct: 1   MAAVLWVLALASLCYPLATINAQAPTGTPSNWQPSTPSAPSNLPTTTPNALSTLPTTTTY 60

Query: 207 --SPLVSKQPPIVAAITPATT 263
             S L S  P   + + P TT
Sbjct: 61  APSTLPSTTPNAPSTL-PTTT 80



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
 Frame = +3

Query: 111 APSKLSTSTPVAPSKLPTTTPNAPFKLPSATS----SPLVSKQPPIVAAITPATTR 266
           APS L T+TP APS LPTT P AP  LP+ATS     P V+KQ P+VAA TP+T++
Sbjct: 94  APSTLPTTTPNAPSTLPTTNPTAPSTLPTATSPSSSKPSVAKQQPVVAA-TPSTSK 148


>ref|XP_003532353.1| PREDICTED: uncharacterized protein LOC100776625 [Glycine max]
          Length = 413

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 38/79 (48%), Positives = 48/79 (60%)
 Frame = +3

Query: 30  MAVVFWALVLAILCYPLASINAQLHASAPSKLSTSTPVAPSKLPTTTPNAPFKLPSATSS 209
           MA VFW L LA L YPLA+INAQ  A  PS         PS L  T+P        ++S+
Sbjct: 1   MAAVFWVLALASLSYPLATINAQAPAGTPSNWQ------PSTLSATSP--------SSST 46

Query: 210 PLVSKQPPIVAAITPATTR 266
           P V+KQPP+VAA TP+T++
Sbjct: 47  PSVAKQPPVVAA-TPSTSK 64


>gb|ABK95386.1| unknown [Populus trichocarpa]
          Length = 241

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
 Frame = +3

Query: 30  MAVVFWALVLAILCYPLASINAQLHASAPSKLSTSTPVAPSKLPTTTPNAPFKLPSA--- 200
           MA V WAL+LA L +PLA  +AQ  A +PS  +T+TP      PTTTP  P + P++   
Sbjct: 1   MASVLWALILACLSFPLAITDAQTPAVSPSTPTTTTPP-----PTTTPTTPTQSPASAVT 55

Query: 201 ---TSSPLVSKQPPIVAAITP 254
               ++P+ S  P +  A TP
Sbjct: 56  PPTATTPISSPSPKVAPATTP 76


>ref|XP_003516871.1| PREDICTED: uncharacterized protein LOC100788023 [Glycine max]
          Length = 274

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/81 (43%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
 Frame = +3

Query: 30  MAVVFWALVLAILCYPLASINAQLHASAPSKLSTSTPVAPSK-----LPTTTPNAPFKLP 194
           MA VFWAL L  LC  L S NAQ  A+AP+    +TP A S      L  T P      P
Sbjct: 1   MAAVFWALALVSLCGQLPS-NAQAPATAPANSPPTTPAATSPSSGTPLAVTLPPTVVASP 59

Query: 195 SATSSPLVSKQPPIVAAITPA 257
             TS+P  + QPP + A  PA
Sbjct: 60  PTTSTPPTTSQPPAIVAPKPA 80


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