BLASTX nr result

ID: Glycyrrhiza24_contig00004633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004633
         (1652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624917.1| Two-component response regulator ARR1 [Medic...   161   4e-37
ref|XP_003521111.1| PREDICTED: uncharacterized protein LOC100815...   137   1e-29
ref|XP_002517275.1| DNA binding protein, putative [Ricinus commu...   125   3e-26
ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-25
ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-24

>ref|XP_003624917.1| Two-component response regulator ARR1 [Medicago truncatula]
            gi|124361203|gb|ABN09175.1| Homeodomain-related [Medicago
            truncatula] gi|355499932|gb|AES81135.1| Two-component
            response regulator ARR1 [Medicago truncatula]
          Length = 299

 Score =  161 bits (408), Expect = 4e-37
 Identities = 88/126 (69%), Positives = 91/126 (72%), Gaps = 6/126 (4%)
 Frame = -1

Query: 1589 LFASSPVPPHFLHPAARPNSDHFLPFVPVPXXXXXXXXXXXXQYHRPVGHFGSPPNGHHF 1410
            LFASSPVPPHFLHP ARPNSDHF+PFVPVP            QYHRPVGHFGSPPNG HF
Sbjct: 176  LFASSPVPPHFLHPVARPNSDHFMPFVPVP-AIHHQQQMAAAQYHRPVGHFGSPPNG-HF 233

Query: 1409 ENPFLSR---XXXXXXXXXXXQLHRIGAAQVHNPV---GGGYVEDMESANASGGRKVLTL 1248
            +NPFLSR              QLHRIGA   HN +   GGGYVEDMESANASGGRKVLTL
Sbjct: 234  DNPFLSRQQHHQQQNQHQHQQQLHRIGAQVHHNTLGGGGGGYVEDMESANASGGRKVLTL 293

Query: 1247 FPTGDD 1230
            FPTGDD
Sbjct: 294  FPTGDD 299


>ref|XP_003521111.1| PREDICTED: uncharacterized protein LOC100815363 [Glycine max]
          Length = 312

 Score =  137 bits (344), Expect = 1e-29
 Identities = 81/125 (64%), Positives = 83/125 (66%), Gaps = 5/125 (4%)
 Frame = -1

Query: 1589 LFASSPVPPHFLHPAARPNSDHFLPFVP-VPXXXXXXXXXXXXQYHRPVGHFGSPPNGHH 1413
            LFASSPVP HFLHPAARPNSDHFLPFVP +             QYHR VGHFGSPPNG H
Sbjct: 196  LFASSPVPAHFLHPAARPNSDHFLPFVPALHPHQQQQQMAAAAQYHRQVGHFGSPPNG-H 254

Query: 1412 FENPFLSRXXXXXXXXXXXQLHRIGAAQVHN---PVGGGYVEDMESAN-ASGGRKVLTLF 1245
            FENPF+SR                G   VHN   PV  GYVEDMESAN ASGGRKVLTLF
Sbjct: 255  FENPFMSRPNLQRMGGGG------GGGPVHNNHHPV-SGYVEDMESANAASGGRKVLTLF 307

Query: 1244 PTGDD 1230
            PTGDD
Sbjct: 308  PTGDD 312


>ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
            gi|223543538|gb|EEF45068.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 315

 Score =  125 bits (315), Expect = 3e-26
 Identities = 75/134 (55%), Positives = 82/134 (61%), Gaps = 14/134 (10%)
 Frame = -1

Query: 1589 LFASSPVPPHFLHPAARPNSDHFLPFVPVPXXXXXXXXXXXXQ--------------YHR 1452
            LFASSPVP HFLHP  RPNSDHFLPFVPV                            YHR
Sbjct: 193  LFASSPVPAHFLHPG-RPNSDHFLPFVPVAALQHHHHQQQMAAAAAAAVAHPQLQSQYHR 251

Query: 1451 PVGHFGSPPNGHHFENPFLSRXXXXXXXXXXXQLHRIGAAQVHNPVGGGYVEDMESANAS 1272
             +GHFGSPPNG  F++PFL+R            +HRIGA  VHN V G YVED+ESAN +
Sbjct: 252  QMGHFGSPPNGQ-FDHPFLARQSQQP-------VHRIGAP-VHNTVPG-YVEDLESANGN 301

Query: 1271 GGRKVLTLFPTGDD 1230
            GGRKVLTLFPTGDD
Sbjct: 302  GGRKVLTLFPTGDD 315


>ref|XP_002336105.1| predicted protein [Populus trichocarpa] gi|222872755|gb|EEF09886.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  123 bits (308), Expect = 2e-25
 Identities = 74/133 (55%), Positives = 81/133 (60%), Gaps = 13/133 (9%)
 Frame = -1

Query: 1589 LFASSPVPPHFLHPAARPNSDHFLPFVPVPXXXXXXXXXXXXQ-------------YHRP 1449
            LFASSPVP HFLHP  RPNSDHFLPFVPV                           YHRP
Sbjct: 202  LFASSPVPAHFLHPG-RPNSDHFLPFVPVAALQQHHHQQQMAAAAAAVGHPQLQGQYHRP 260

Query: 1448 VGHFGSPPNGHHFENPFLSRXXXXXXXXXXXQLHRIGAAQVHNPVGGGYVEDMESANASG 1269
            +GHFGSP NG  FE+PFL+R            +HR+GA  VHN V G YVED+ESAN + 
Sbjct: 261  MGHFGSPTNGQ-FEHPFLARQTQQP-------VHRMGAP-VHNAVPG-YVEDLESANGNE 310

Query: 1268 GRKVLTLFPTGDD 1230
            GRKVLTLFPTGDD
Sbjct: 311  GRKVLTLFPTGDD 323


>ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|222854845|gb|EEE92392.1|
            predicted protein [Populus trichocarpa]
          Length = 318

 Score =  118 bits (296), Expect = 4e-24
 Identities = 72/129 (55%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
 Frame = -1

Query: 1589 LFASSPVPPHFLHPAARPNSDHFLPFVPVPXXXXXXXXXXXXQ---------YHRPVGHF 1437
            LFASSPVP HFLHP  RPNSDHFLPFVPV                       YHR +GHF
Sbjct: 201  LFASSPVPAHFLHPG-RPNSDHFLPFVPVAALQNHHHQHQMAAMGHPQLPSQYHRQMGHF 259

Query: 1436 GSPPNGHHFENPFLSRXXXXXXXXXXXQLHRIGAAQVHNPVGGGYVEDMESANASGGRKV 1257
            GSP NG  FE+PFL R            +HR+GA  V N V G YVED+ES N +GGRKV
Sbjct: 260  GSPTNGQ-FEHPFLPRQTQQP-------VHRMGAP-VPNTVPG-YVEDLESVNGNGGRKV 309

Query: 1256 LTLFPTGDD 1230
            LTLFPTGDD
Sbjct: 310  LTLFPTGDD 318


Top