BLASTX nr result

ID: Glycyrrhiza24_contig00004621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004621
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807...   217   9e-55
ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818...   217   9e-55
gb|ACU23248.1| unknown [Glycine max]                                  217   9e-55
gb|AFK35450.1| unknown [Medicago truncatula]                          200   1e-49
ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [...   178   5e-43

>ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
          Length = 244

 Score =  217 bits (552), Expect = 9e-55
 Identities = 109/122 (89%), Positives = 115/122 (94%)
 Frame = -2

Query: 392 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLREAF 213
           MAF++KIG LLK+SAVKHINQD S STPSLFQAIRSMSSAKLFVGGISYSTDDMSLRE+F
Sbjct: 1   MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESF 60

Query: 212 GRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAIQAMDGQDLHGRSIRVNYATERS 33
            RYGEV+D KVIMDRETGRSRGFGF+TFATSEDASSAIQ MDGQDLHGR IRVNYATERS
Sbjct: 61  ARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120

Query: 32  RP 27
           RP
Sbjct: 121 RP 122


>ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
          Length = 245

 Score =  217 bits (552), Expect = 9e-55
 Identities = 109/122 (89%), Positives = 116/122 (95%)
 Frame = -2

Query: 392 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLREAF 213
           MAF++KIG L+K+SAVKHINQD S+STPSLFQAIRSMSSAKLFVGGISYSTDDMSLRE+F
Sbjct: 1   MAFLNKIGNLVKNSAVKHINQDFSVSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESF 60

Query: 212 GRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAIQAMDGQDLHGRSIRVNYATERS 33
            RYGEV+D KVIMDRETGRSRGFGFITFATSEDASSAIQ MDGQDLHGR IRVNYATERS
Sbjct: 61  ARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120

Query: 32  RP 27
           RP
Sbjct: 121 RP 122


>gb|ACU23248.1| unknown [Glycine max]
          Length = 243

 Score =  217 bits (552), Expect = 9e-55
 Identities = 109/122 (89%), Positives = 115/122 (94%)
 Frame = -2

Query: 392 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLREAF 213
           MAF++KIG LLK+SAVKHINQD S STPSLFQAIRSMSSAKLFVGGISYSTDDMSLRE+F
Sbjct: 1   MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESF 60

Query: 212 GRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAIQAMDGQDLHGRSIRVNYATERS 33
            RYGEV+D KVIMDRETGRSRGFGF+TFATSEDASSAIQ MDGQDLHGR IRVNYATERS
Sbjct: 61  ARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120

Query: 32  RP 27
           RP
Sbjct: 121 RP 122


>gb|AFK35450.1| unknown [Medicago truncatula]
          Length = 176

 Score =  200 bits (508), Expect = 1e-49
 Identities = 97/122 (79%), Positives = 113/122 (92%)
 Frame = -2

Query: 392 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLREAF 213
           MAF  K GKLL++SAVKHIN D+SMSTPSLFQAIRSMSSAKLF+GG+SYSTD+  LREAF
Sbjct: 1   MAFFGKTGKLLQNSAVKHINHDLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAF 60

Query: 212 GRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAIQAMDGQDLHGRSIRVNYATERS 33
            RYG+VLDAK+IMDR+TGRSRGFGFITFATSE+ASSA+QAMD ++L GR++RVNYATER+
Sbjct: 61  SRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQAMDNKELDGRTVRVNYATERA 120

Query: 32  RP 27
           RP
Sbjct: 121 RP 122


>ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 267

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/121 (69%), Positives = 106/121 (87%)
 Frame = -2

Query: 392 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLREAF 213
           MAF+SK+G LL+ +A K I+ ++S S PS+FQAIR MSS+K+FVGGISY TDD SLREAF
Sbjct: 1   MAFLSKVGNLLRQTATKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREAF 60

Query: 212 GRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAIQAMDGQDLHGRSIRVNYATERS 33
           G+YGEV++A+VI+DRETGRSRGF F+T+ +SE+ASSAIQA+DGQDLHGR +RVNYA +R 
Sbjct: 61  GKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDRP 120

Query: 32  R 30
           R
Sbjct: 121 R 121


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