BLASTX nr result

ID: Glycyrrhiza24_contig00004578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004578
         (1827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36520.1| unknown [Medicago truncatula]                          568   e-159
ref|NP_001242759.1| uncharacterized protein LOC100788186 [Glycin...   556   e-156
ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|2...   498   e-138
ref|XP_003635816.1| hypothetical protein MTR_011s1001, partial [...   492   e-136
ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyro...   483   e-134

>gb|AFK36520.1| unknown [Medicago truncatula]
          Length = 342

 Score =  568 bits (1464), Expect = e-159
 Identities = 284/341 (83%), Positives = 304/341 (89%)
 Frame = +3

Query: 228  MAPFSIATLPSLHICHLRKPPNLILPIRCXXXXXXXXXXXXXXKAVHFDLKTYWTSLMLQ 407
            MAPF+IAT+PSL+I   +K PN ILPIRC              K VHFDLKTYWTSLM Q
Sbjct: 1    MAPFTIATMPSLNIGRFQKSPNRILPIRCSMAAPSPSSVSIRSKVVHFDLKTYWTSLMTQ 60

Query: 408  INQKLDEVIPVQFPSKIYEAMRYSVLAEGAKRAPPVMCISACELFGGSRLAAFPTACALE 587
            INQKLDE I VQFP +IYEAMRYS LA+GAKR+PPVMCISACELFGGSRLAAFPTACALE
Sbjct: 61   INQKLDEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALE 120

Query: 588  MVHAASLIHDDLPCMDDSPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPSNLV 767
            MVHAASLIHDDLPCMDDS SRRGQPSNH +YGVDMAILAGDALFPLGFQHIVSHTPS+LV
Sbjct: 121  MVHAASLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLV 180

Query: 768  PGPRLLRVIAEIARTVGSTGMAAGQFLDLEGGPNAVGFIQDKKFGEMGECSAVCGGLLAG 947
            P PR+LRVIAEIAR VGSTGMAAGQFLDL+GGPNAVG IQDKKFGEM ECSAVCGGLLAG
Sbjct: 181  PEPRVLRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGLIQDKKFGEMAECSAVCGGLLAG 240

Query: 948  AKDDEIERLRRYGRAVGVLYAIVDDILEERLKSEGDNDMKNKGKSYVGVYGVEKAAEVAE 1127
            A+DDEIERLRRYGRAVGVLYAIVDDILEERLK EGD D +N GKSYV VYGVEKAAEVAE
Sbjct: 241  AEDDEIERLRRYGRAVGVLYAIVDDILEERLKPEGDKDRENSGKSYVEVYGVEKAAEVAE 300

Query: 1128 ELRAKAMEELDGFEKYGERVLPLYSFVDYAINRSFSVDDTS 1250
            ELRAKA+EELDGFEKYG++VLPLYSFV+YAI+RSF+VD+ S
Sbjct: 301  ELRAKALEELDGFEKYGDQVLPLYSFVNYAIDRSFNVDEAS 341


>ref|NP_001242759.1| uncharacterized protein LOC100788186 [Glycine max]
            gi|255635048|gb|ACU17882.1| unknown [Glycine max]
          Length = 342

 Score =  556 bits (1432), Expect = e-156
 Identities = 280/342 (81%), Positives = 297/342 (86%)
 Frame = +3

Query: 228  MAPFSIATLPSLHICHLRKPPNLILPIRCXXXXXXXXXXXXXXKAVHFDLKTYWTSLMLQ 407
            MAPF+ ATLPS HIC L KP NL   +RC              KA  FDLKTY  +LM+Q
Sbjct: 1    MAPFAFATLPSSHICRLPKPTNLKFRVRCSTAASSPSSVSTRSKAAGFDLKTYCANLMVQ 60

Query: 408  INQKLDEVIPVQFPSKIYEAMRYSVLAEGAKRAPPVMCISACELFGGSRLAAFPTACALE 587
            INQKLDE IPVQFP +IYEAMRYSVLA+GAKRAPPVMCISACELFGGSRLAAFPTACALE
Sbjct: 61   INQKLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGSRLAAFPTACALE 120

Query: 588  MVHAASLIHDDLPCMDDSPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPSNLV 767
            MVHAASLIHDDLPCMDDSPSRRGQPSNH +YGVDMAILAGDALFPLGF+HIVS TPS+LV
Sbjct: 121  MVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLV 180

Query: 768  PGPRLLRVIAEIARTVGSTGMAAGQFLDLEGGPNAVGFIQDKKFGEMGECSAVCGGLLAG 947
            P   LLRVIAEIAR+VGSTGMAAGQFLDLEGGPNAVGFIQ+KKFGEMGE SAVCGG LAG
Sbjct: 181  PESHLLRVIAEIARSVGSTGMAAGQFLDLEGGPNAVGFIQEKKFGEMGESSAVCGGFLAG 240

Query: 948  AKDDEIERLRRYGRAVGVLYAIVDDILEERLKSEGDNDMKNKGKSYVGVYGVEKAAEVAE 1127
            A+DDEIERLRRYGRAVGVLYA+VDDI+EERLK EGD + KNKGKSY  VYGVEKA E AE
Sbjct: 241  AEDDEIERLRRYGRAVGVLYAVVDDIIEERLKVEGDGNRKNKGKSYAEVYGVEKAIEKAE 300

Query: 1128 ELRAKAMEELDGFEKYGERVLPLYSFVDYAINRSFSVDDTSG 1253
            ELRAKA EELDGFEK+GERVLPLYSFVDYA +RSFSVDD SG
Sbjct: 301  ELRAKAKEELDGFEKHGERVLPLYSFVDYAFDRSFSVDDASG 342


>ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|222849344|gb|EEE86891.1|
            predicted protein [Populus trichocarpa]
          Length = 314

 Score =  498 bits (1283), Expect = e-138
 Identities = 245/300 (81%), Positives = 272/300 (90%), Gaps = 2/300 (0%)
 Frame = +3

Query: 357  KAVHFDLKTYWTSLMLQINQKLDEVIPVQFPSKIYEAMRYSVLAEGAKRAPPVMCISACE 536
            K   FDLKTYWT+L+L+INQKLD+ +P+Q+P KIYEAMRYSVLA+GAKRAPPVMC++ACE
Sbjct: 15   KTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACE 74

Query: 537  LFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHAVYGVDMAILAGDAL 716
            LFGG+R AAFPTACALEMVH+ASLIHDDLPCMDD PSRRGQPSNH +YGVDMAILAGDAL
Sbjct: 75   LFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDAL 134

Query: 717  FPLGFQHIVSHTPSNLVPGPRLLRVIAEIARTVGSTGMAAGQFLDLEGGPNAVGFIQDKK 896
            FPLGF+HIVSHTPS+LVP PRLL VIAEIAR VGSTGMAAGQFLDLEGGPN+V F+Q+KK
Sbjct: 135  FPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEGGPNSVEFVQEKK 194

Query: 897  FGEMGECSAVCGGLLAGAKDDEIERLRRYGRAVGVLYAIVDDILEER-LKSEGDND-MKN 1070
            FGEMGECSAVCGGLLAGAKDDEI+RLRRYGRAVGVLY +VDDILE + +KS+ D D  K 
Sbjct: 195  FGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSKVDEDKKKR 254

Query: 1071 KGKSYVGVYGVEKAAEVAEELRAKAMEELDGFEKYGERVLPLYSFVDYAINRSFSVDDTS 1250
            KGKSYV +YGVEKA EVAEELRAKA EELDGFEKYGE VLPLYSFVDYA +R FS  ++S
Sbjct: 255  KGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLYSFVDYAADRGFSFGESS 314


>ref|XP_003635816.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
            gi|355501751|gb|AES82954.1| hypothetical protein
            MTR_011s1001, partial [Medicago truncatula]
          Length = 277

 Score =  492 bits (1267), Expect = e-136
 Identities = 244/276 (88%), Positives = 260/276 (94%)
 Frame = +3

Query: 423  DEVIPVQFPSKIYEAMRYSVLAEGAKRAPPVMCISACELFGGSRLAAFPTACALEMVHAA 602
            DE I VQFP +IYEAMRYS LA+GAKR+PPVMCISACELFGGSRLAAFPTACALEMVHAA
Sbjct: 1    DEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAA 60

Query: 603  SLIHDDLPCMDDSPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPSNLVPGPRL 782
            SLIHDDLPCMDDS SRRGQPSNH +YGVDMAILAGDALFPLGFQHIVSHTPS+LVP PR+
Sbjct: 61   SLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRV 120

Query: 783  LRVIAEIARTVGSTGMAAGQFLDLEGGPNAVGFIQDKKFGEMGECSAVCGGLLAGAKDDE 962
            LRVIAEIAR VGSTGMAAGQFLDL+GGPNAVG IQDKKFGEM ECSAVCGGLLAGA+DDE
Sbjct: 121  LRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGLIQDKKFGEMAECSAVCGGLLAGAEDDE 180

Query: 963  IERLRRYGRAVGVLYAIVDDILEERLKSEGDNDMKNKGKSYVGVYGVEKAAEVAEELRAK 1142
            IERLRRYGRAVGVLYAIVDDILEERLK EGD D +N GKSYV VYGVEKAAEVAEELRAK
Sbjct: 181  IERLRRYGRAVGVLYAIVDDILEERLKPEGDKDRENSGKSYVEVYGVEKAAEVAEELRAK 240

Query: 1143 AMEELDGFEKYGERVLPLYSFVDYAINRSFSVDDTS 1250
            A+EELDGFEKYG++VLPLYSFV+YAI+RSF+VD+ S
Sbjct: 241  ALEELDGFEKYGDQVLPLYSFVNYAIDRSFNVDEAS 276


>ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small
            subunit, chloroplastic-like [Cucumis sativus]
            gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric
            geranylgeranyl pyrophosphate synthase small subunit,
            chloroplastic-like [Cucumis sativus]
          Length = 335

 Score =  483 bits (1243), Expect = e-134
 Identities = 244/340 (71%), Positives = 277/340 (81%), Gaps = 2/340 (0%)
 Frame = +3

Query: 237  FSIATLPSLHICHLRKPPNLILPIRCXXXXXXXXXXXXXXKAVHFDLKTYWTSLMLQINQ 416
            FS+    SL     RK P     IRC              +++HFDLKTYW  L+L+INQ
Sbjct: 3    FSLMAASSLTTSFQRKTP-----IRCSSSSSPALSSQP--QSIHFDLKTYWKQLILEINQ 55

Query: 417  KLDEVIPVQFPSKIYEAMRYSVLAEGAKRAPPVMCISACELFGGSRLAAFPTACALEMVH 596
            KLDE +P+Q+P +IYEAMRYSVLA+GAKRAPPVMC++ACELFG  RLAAFPTACALEMVH
Sbjct: 56   KLDEAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH 115

Query: 597  AASLIHDDLPCMDDSPSRRGQPSNHAVYGVDMAILAGDALFPLGFQHIVSHTPSNLVPGP 776
             ASLIHDDLPCMDD PSRRGQPSNH VYGVDMAILAGDALFPLGFQHIVSHTP +LVP  
Sbjct: 116  EASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPES 175

Query: 777  RLLRVIAEIARTVGSTGMAAGQFLDLEGGPNAVGFIQDKKFGEMGECSAVCGGLLAGAKD 956
            RLLRV+AEIAR VGS GMAAGQFLDLEGGPN+V F+Q+KKFGEM +CSAVCGGLLAGA+D
Sbjct: 176  RLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAED 235

Query: 957  DEIERLRRYGRAVGVLYAIVDDILEERLK--SEGDNDMKNKGKSYVGVYGVEKAAEVAEE 1130
             EI+RLRRYGRAVGVLY +VDDILEE+ K     D   ++KGKSYV VYG+EKA EVAEE
Sbjct: 236  HEIQRLRRYGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEE 295

Query: 1131 LRAKAMEELDGFEKYGERVLPLYSFVDYAINRSFSVDDTS 1250
            LRAKA  EL+GFEKYG++V+PLYSFVDYA +RSFS + +S
Sbjct: 296  LRAKAKNELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335


Top