BLASTX nr result

ID: Glycyrrhiza24_contig00004569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004569
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like...   583   e-164
ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like...   559   e-157
ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like...   554   e-155
ref|XP_002305682.1| predicted protein [Populus trichocarpa] gi|2...   551   e-154
ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like...   546   e-153

>ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 577

 Score =  583 bits (1502), Expect = e-164
 Identities = 291/372 (78%), Positives = 298/372 (80%)
 Frame = +2

Query: 56   MAVETLSYQNGVVSKGDLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGPNASEDGDD 235
            MA ET +YQNGVVS  D                                     +EDGDD
Sbjct: 1    MAAETFTYQNGVVSNADQDANSNSSATKKSRENERRRRRRKQKKKNNKA-SKEPTEDGDD 59

Query: 236  AKENTDPXXXXXXXXXXYVPEKAELDEGLDEEFRKIFEKFSFGEVTGSEDNDKKDESAEN 415
            A ENTDP          YVPE+AELDEGLDEEFRKIFEKFSFGEVTGSEDNDKKDES EN
Sbjct: 60   ATENTDPQQVVEQVEIEYVPERAELDEGLDEEFRKIFEKFSFGEVTGSEDNDKKDESVEN 119

Query: 416  ATTXXXXXXXXXXXXXXXXXXXXGVSNKKKKLQRRMKIAELKQICSRPDVVEVWDATSAD 595
            ATT                    G+SNKKKKLQRRMKIAELKQICSRPDVVEVWDAT++D
Sbjct: 120  ATTNKKADSDSEEEENDNEQKEKGISNKKKKLQRRMKIAELKQICSRPDVVEVWDATASD 179

Query: 596  PKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKE 775
            PKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEK PFQLPDFIAATGIEKIRQAYIEKE
Sbjct: 180  PKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKLPFQLPDFIAATGIEKIRQAYIEKE 239

Query: 776  DSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREM 955
            DSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLG+LYHEGKEFEVKLREM
Sbjct: 240  DSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREM 299

Query: 956  KPGMLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG 1135
            KPGMLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG
Sbjct: 300  KPGMLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG 359

Query: 1136 WGKPPVDEYGRP 1171
            WGKPPVDEYGRP
Sbjct: 360  WGKPPVDEYGRP 371


>ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  559 bits (1441), Expect = e-157
 Identities = 279/372 (75%), Positives = 291/372 (78%)
 Frame = +2

Query: 56   MAVETLSYQNGVVSKGDLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGPNASEDGDD 235
            MA ET+ YQNGVV+  +                                P PN+SE+ DD
Sbjct: 1    MAAETIPYQNGVVASSN--DSTATGKKSRENDRRRRRRKQKKNNKASEAPVPNSSEESDD 58

Query: 236  AKENTDPXXXXXXXXXXYVPEKAELDEGLDEEFRKIFEKFSFGEVTGSEDNDKKDESAEN 415
            AKEN D           YVPEKAEL EG+DEEFRKIFEKF+F + T  ED DKKD S EN
Sbjct: 59   AKENNDSKQLVEQIEIEYVPEKAELVEGMDEEFRKIFEKFTFTDATALEDTDKKDGSEEN 118

Query: 416  ATTXXXXXXXXXXXXXXXXXXXXGVSNKKKKLQRRMKIAELKQICSRPDVVEVWDATSAD 595
            A T                    G+SNKKKKLQRRMKIAELKQIC RPDVVEVWDAT++D
Sbjct: 119  AATNKKANSDSEEEENDNEQKEKGISNKKKKLQRRMKIAELKQICLRPDVVEVWDATASD 178

Query: 596  PKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKE 775
            PKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEK PFQLPDFIAATGIEKIRQAYIEKE
Sbjct: 179  PKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKPPFQLPDFIAATGIEKIRQAYIEKE 238

Query: 776  DSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREM 955
            DSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREM
Sbjct: 239  DSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREM 298

Query: 956  KPGMLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG 1135
            KPGMLSHELKEALGMPEG+PPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG
Sbjct: 299  KPGMLSHELKEALGMPEGSPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG 358

Query: 1136 WGKPPVDEYGRP 1171
            WGKPPVDEYGRP
Sbjct: 359  WGKPPVDEYGRP 370


>ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  554 bits (1427), Expect = e-155
 Identities = 277/372 (74%), Positives = 290/372 (77%)
 Frame = +2

Query: 56   MAVETLSYQNGVVSKGDLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGPNASEDGDD 235
            MA ET+ YQNGVV+  +                                P PN++E+ DD
Sbjct: 1    MAAETIPYQNGVVANSN--DSSAAVKKSRESDRRRRRRKQKKSNKASEAPVPNSAEESDD 58

Query: 236  AKENTDPXXXXXXXXXXYVPEKAELDEGLDEEFRKIFEKFSFGEVTGSEDNDKKDESAEN 415
            AKEN D           YVPEKAEL EG+DEEFRKIFEKF+F + T  ED DKKD S EN
Sbjct: 59   AKENDDSKQLVEQIEIEYVPEKAELVEGMDEEFRKIFEKFTFTDATALEDTDKKDGSEEN 118

Query: 416  ATTXXXXXXXXXXXXXXXXXXXXGVSNKKKKLQRRMKIAELKQICSRPDVVEVWDATSAD 595
            A T                    G+SNKKKKLQRRMKIA+LKQICSRPDVVEVWDAT++D
Sbjct: 119  AATNKKADSDSEEEENDNEQKEKGISNKKKKLQRRMKIAQLKQICSRPDVVEVWDATASD 178

Query: 596  PKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKE 775
            PKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEK  FQLPDFIAATGIEKIRQAYIEKE
Sbjct: 179  PKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKPAFQLPDFIAATGIEKIRQAYIEKE 238

Query: 776  DSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREM 955
            DSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREM
Sbjct: 239  DSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREM 298

Query: 956  KPGMLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG 1135
            KPGMLS ELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG
Sbjct: 299  KPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGG 358

Query: 1136 WGKPPVDEYGRP 1171
            WGKPPVDEYGRP
Sbjct: 359  WGKPPVDEYGRP 370


>ref|XP_002305682.1| predicted protein [Populus trichocarpa] gi|222848646|gb|EEE86193.1|
            predicted protein [Populus trichocarpa]
          Length = 585

 Score =  551 bits (1419), Expect = e-154
 Identities = 279/379 (73%), Positives = 290/379 (76%), Gaps = 7/379 (1%)
 Frame = +2

Query: 56   MAVETLSYQNGVVSKGDLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGP-------N 214
            M VETL YQNGVVS GDL                                          
Sbjct: 1    MTVETLPYQNGVVSNGDLASANPNSTKKSKVNERRRRRRKQKKNKSQVTDASANGYDSDT 60

Query: 215  ASEDGDDAKENTDPXXXXXXXXXXYVPEKAELDEGLDEEFRKIFEKFSFGEVTGSEDNDK 394
            A++DGDDAKEN DP          YVPEKAEL++G+DE FR IFEKF+  +  GSE+NDK
Sbjct: 61   ANDDGDDAKENADPQQVVDQVVIEYVPEKAELEDGMDE-FRNIFEKFNLLQSAGSEENDK 119

Query: 395  KDESAENATTXXXXXXXXXXXXXXXXXXXXGVSNKKKKLQRRMKIAELKQICSRPDVVEV 574
            KDES +NA                      GVSNKKKKLQRRMKIA LKQICSRPDVVEV
Sbjct: 120  KDESVQNAEAKKKADSDSDDEEQENEQKEKGVSNKKKKLQRRMKIANLKQICSRPDVVEV 179

Query: 575  WDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIR 754
            WDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIR
Sbjct: 180  WDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIR 239

Query: 755  QAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEF 934
            QAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLT+LGDLYHEGKEF
Sbjct: 240  QAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYHEGKEF 299

Query: 935  EVKLREMKPGMLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGAS 1114
            EVKLREMKPG LS ELKE+LGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGAS
Sbjct: 300  EVKLREMKPGSLSQELKESLGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGAS 359

Query: 1115 FGYHPGGWGKPPVDEYGRP 1171
            FGYH GGWGKPPVDEYGRP
Sbjct: 360  FGYHAGGWGKPPVDEYGRP 378


>ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus]
            gi|449515207|ref|XP_004164641.1| PREDICTED: splicing
            factor 3B subunit 2-like [Cucumis sativus]
          Length = 580

 Score =  546 bits (1406), Expect = e-153
 Identities = 263/322 (81%), Positives = 280/322 (86%)
 Frame = +2

Query: 206  GPNASEDGDDAKENTDPXXXXXXXXXXYVPEKAELDEGLDEEFRKIFEKFSFGEVTGSED 385
            G ++   GDD KEN DP          Y+PEKAELD+ LDE+FRK+FEKFSF EV G+E+
Sbjct: 58   GEDSDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEE 117

Query: 386  NDKKDESAENATTXXXXXXXXXXXXXXXXXXXXGVSNKKKKLQRRMKIAELKQICSRPDV 565
            N+ KDESA+NAT+                    G+SNKKKKLQRRMKIAELKQICSRPDV
Sbjct: 118  NEDKDESAQNATSKKSDSDSDDEEHDNQQKEK-GLSNKKKKLQRRMKIAELKQICSRPDV 176

Query: 566  VEVWDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIE 745
            VE+WDAT+ADPKLLV+LKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIE
Sbjct: 177  VEIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIE 236

Query: 746  KIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEG 925
            KIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLT+LGDLY+EG
Sbjct: 237  KIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEG 296

Query: 926  KEFEVKLREMKPGMLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPP 1105
            KEFEVKLREMKPGMLS ELKEALGMPEGAPPPWLINMQRYGPPPSYP LKIPGLNAPIPP
Sbjct: 297  KEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPP 356

Query: 1106 GASFGYHPGGWGKPPVDEYGRP 1171
            GASFGYHPGGWGKPPVDEYGRP
Sbjct: 357  GASFGYHPGGWGKPPVDEYGRP 378


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