BLASTX nr result

ID: Glycyrrhiza24_contig00004536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004536
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35844.1| unknown [Medicago truncatula]                          451   e-124
gb|AFK34252.1| unknown [Medicago truncatula]                          449   e-124
ref|XP_003524433.1| PREDICTED: F-box protein SKIP8-like [Glycine...   446   e-123
ref|XP_003530424.1| PREDICTED: F-box protein SKIP8-like [Glycine...   434   e-119
ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis...   394   e-107

>gb|AFK35844.1| unknown [Medicago truncatula]
          Length = 284

 Score =  451 bits (1159), Expect = e-124
 Identities = 224/298 (75%), Positives = 239/298 (80%)
 Frame = +2

Query: 323  MEIFSVLSEPFLVAVTVTALCFVLAXXXXXXXXXXXXXXHKPTKHCNCAXXXXXXXXXXA 502
            M+IFS  S+PFL+AVTVTALCF +A                 TKHCNCA           
Sbjct: 1    MDIFSNFSQPFLLAVTVTALCFFIALFSFFRTFSLSRRFTPSTKHCNCASSDSDSD---- 56

Query: 503  TAIPYLNGGGAVDEMLEXXXXXXXXXXXXXVVLADRRTGSSMMEELVPEITTHALSYLDY 682
              +PYLNGG    +M E             VVLADRRTGSSMMEELVPEITTHALSYLDY
Sbjct: 57   AVVPYLNGG--FSQMTEISPPP--------VVLADRRTGSSMMEELVPEITTHALSYLDY 106

Query: 683  PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAYYAATRAIVNINTE 862
            PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD + P NGWKAYYAATRAIV +NTE
Sbjct: 107  PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVRPSNGWKAYYAATRAIVIVNTE 166

Query: 863  FFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVFNWEQGLNFQVRDV 1042
            FFN++RDKSI AMSRFWLNADYVKC+HASGELFSG+N VMQSWQLVFNW+QGLNFQVRDV
Sbjct: 167  FFNILRDKSISAMSRFWLNADYVKCVHASGELFSGYNGVMQSWQLVFNWDQGLNFQVRDV 226

Query: 1043 RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGEVDHHIVHG 1216
            RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNG+V+  IVHG
Sbjct: 227  RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGDVEQQIVHG 284


>gb|AFK34252.1| unknown [Medicago truncatula]
          Length = 284

 Score =  449 bits (1156), Expect = e-124
 Identities = 222/298 (74%), Positives = 238/298 (79%)
 Frame = +2

Query: 323  MEIFSVLSEPFLVAVTVTALCFVLAXXXXXXXXXXXXXXHKPTKHCNCAXXXXXXXXXXA 502
            M+IFS  S+PFL+AVTVTALCF +A                 TKHCNCA           
Sbjct: 1    MDIFSNFSQPFLLAVTVTALCFFIALFSFFRTFSLSRRFTPSTKHCNCASSDSNSD---- 56

Query: 503  TAIPYLNGGGAVDEMLEXXXXXXXXXXXXXVVLADRRTGSSMMEELVPEITTHALSYLDY 682
              +PYLNGG +    +              VVLADRRTGSSMMEELVPEITTHALSYLDY
Sbjct: 57   AVVPYLNGGFSQTTEISPPP----------VVLADRRTGSSMMEELVPEITTHALSYLDY 106

Query: 683  PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAYYAATRAIVNINTE 862
            PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD + P NGWKAYYAATRAIV +NTE
Sbjct: 107  PSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVRPSNGWKAYYAATRAIVIVNTE 166

Query: 863  FFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVFNWEQGLNFQVRDV 1042
            FFN++RDKSI AMSRFWLNADYVKC+HASGELFSG+N VMQSWQLVFNW+QGLNFQVRDV
Sbjct: 167  FFNILRDKSISAMSRFWLNADYVKCVHASGELFSGYNGVMQSWQLVFNWDQGLNFQVRDV 226

Query: 1043 RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGEVDHHIVHG 1216
            RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNG+V+  IVHG
Sbjct: 227  RARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGDVEQQIVHG 284


>ref|XP_003524433.1| PREDICTED: F-box protein SKIP8-like [Glycine max]
          Length = 286

 Score =  446 bits (1147), Expect = e-123
 Identities = 224/300 (74%), Positives = 240/300 (80%), Gaps = 2/300 (0%)
 Frame = +2

Query: 323  MEIFSVLSEPFLVAVTVTALCFVLAXXXXXXXXXXXXXXHKPTK--HCNCAXXXXXXXXX 496
            MEIFSVLSEPFLVA+ VTALCF+ A                P +  HC+CA         
Sbjct: 1    MEIFSVLSEPFLVALAVTALCFLFALFALLRSSFSLPRRFTPPRKHHCDCASNSD----- 55

Query: 497  XATAIPYLNGGGAVDEMLEXXXXXXXXXXXXXVVLADRRTGSSMMEELVPEITTHALSYL 676
             A A+PYLNGG    EMLE              VL +RRTGSSMMEELVPEITTHALSYL
Sbjct: 56   -AGAVPYLNGG--CTEMLEPSPVPAP------AVLTERRTGSSMMEELVPEITTHALSYL 106

Query: 677  DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAYYAATRAIVNIN 856
            DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP NGWKAYYAATRAIVNIN
Sbjct: 107  DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVTPTNGWKAYYAATRAIVNIN 166

Query: 857  TEFFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVFNWEQGLNFQVR 1036
            TEFFN++RDKS+ AMSRFWLNADYVKCIHASGELFSG+N VMQSWQL FNWEQGLN QV+
Sbjct: 167  TEFFNIVRDKSLQAMSRFWLNADYVKCIHASGELFSGYNAVMQSWQLAFNWEQGLNTQVQ 226

Query: 1037 DVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGEVDHHIVHG 1216
            DVRAR+LTDMAWVTMKTYVDMDTGPFNVTN++EFHNGRWYMVHHHS VMNG+VD  IVHG
Sbjct: 227  DVRARILTDMAWVTMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSCVMNGDVDLMIVHG 286


>ref|XP_003530424.1| PREDICTED: F-box protein SKIP8-like [Glycine max]
          Length = 284

 Score =  434 bits (1115), Expect = e-119
 Identities = 222/300 (74%), Positives = 236/300 (78%), Gaps = 2/300 (0%)
 Frame = +2

Query: 323  MEIFSVLSEPFLVAVTVTALCFVLAXXXXXXXXXXXXXXHKPTK--HCNCAXXXXXXXXX 496
            MEIFSVLSEPFLVA+ VTALCF+ A                P +  HC+C          
Sbjct: 1    MEIFSVLSEPFLVALAVTALCFLFALFSLLRSSFSLPRRFTPPRKHHCDCTSNSD----- 55

Query: 497  XATAIPYLNGGGAVDEMLEXXXXXXXXXXXXXVVLADRRTGSSMMEELVPEITTHALSYL 676
             A A+PYLNGG    EMLE              VL +RR GSSMMEELVPEITTHALSYL
Sbjct: 56   -AAAVPYLNGGRT--EMLEPSPVPAP------AVLTERRMGSSMMEELVPEITTHALSYL 106

Query: 677  DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAYYAATRAIVNIN 856
            DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD ITP NGWKAYYAATRAIVNIN
Sbjct: 107  DYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSITPTNGWKAYYAATRAIVNIN 166

Query: 857  TEFFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVFNWEQGLNFQVR 1036
            TEFFN++RDKS+ AMS FWLNADYVKCIHASG  FSG+N VMQ WQLVFNWEQGLNFQVR
Sbjct: 167  TEFFNIVRDKSLQAMSHFWLNADYVKCIHASG-FFSGYNAVMQGWQLVFNWEQGLNFQVR 225

Query: 1037 DVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGEVDHHIVHG 1216
            DV ARVLTDMAWVTMKTYVDMDTGPFNVTN++EFHNGRWYMVHHHSSV +G+VDH IVHG
Sbjct: 226  DVCARVLTDMAWVTMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSV-DGDVDHQIVHG 284


>ref|XP_004149013.1| PREDICTED: F-box protein SKIP8-like [Cucumis sativus]
            gi|449506211|ref|XP_004162683.1| PREDICTED: F-box protein
            SKIP8-like [Cucumis sativus]
          Length = 313

 Score =  394 bits (1012), Expect = e-107
 Identities = 198/313 (63%), Positives = 230/313 (73%), Gaps = 22/313 (7%)
 Frame = +2

Query: 344  SEPFLVAVTVTALCFVLAXXXXXXXXXXXXXXHKPT--------KHCNCAXXXXXXXXXX 499
            S+PF +A  VT LCF+LA                 T        ++CNC           
Sbjct: 13   SQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVGTRNCNCTCSLNGGVVIR 72

Query: 500  ------------ATAIPYLNGGGAVDEMLEXXXXXXXXXXXXXVVLADRRTGSSMMEELV 643
                        +T++PYLNG     E+LE             VV+ +R+TG+SMME+LV
Sbjct: 73   GLDPRAEITSSTSTSMPYLNGRAV--EVLEKAP----------VVVTERQTGASMMEQLV 120

Query: 644  PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPINGWKAY 823
            PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TPINGWK+Y
Sbjct: 121  PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 824  YAATRAIVNINTEFFNVIRDKSIPAMSRFWLNADYVKCIHASGELFSGFNDVMQSWQLVF 1003
            YAATR I+NIN +F+N+IRD+S+ AMSRFWLNADYVKCIHASGE FSG+N V+QSWQ+ F
Sbjct: 181  YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAF 240

Query: 1004 NWEQGLNFQVRDVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVM 1183
            NWEQG+NFQVRDVRARVLTDMAWV+MKTYVDMDTGPFNVTN++EFHNGRWYMVHHHSSVM
Sbjct: 241  NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 1184 --NGEVDHHIVHG 1216
               GE++  +VHG
Sbjct: 301  LIVGEMEQQMVHG 313


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