BLASTX nr result

ID: Glycyrrhiza24_contig00004535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004535
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...    98   2e-41
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis...    98   3e-41
ref|XP_002307496.1| predicted protein [Populus trichocarpa] gi|3...    97   3e-41
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380...    96   9e-41
ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-40

>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
           gi|255626487|gb|ACU13588.1| unknown [Glycine max]
          Length = 97

 Score = 98.2 bits (243), Expect(2) = 2e-41
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = +1

Query: 4   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 150
           MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 49



 Score = 95.9 bits (237), Expect(2) = 2e-41
 Identities = 47/48 (97%), Positives = 48/48 (100%)
 Frame = +2

Query: 224 GDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 367
           GDVEEIVTTVEIDDETYEEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 50  GDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
           gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
           [Ricinus communis]
          Length = 97

 Score = 98.2 bits (243), Expect(2) = 3e-41
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = +1

Query: 4   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 150
           MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 49



 Score = 95.5 bits (236), Expect(2) = 3e-41
 Identities = 46/48 (95%), Positives = 48/48 (100%)
 Frame = +2

Query: 224 GDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 367
           GDVEE+VTTVEIDDETYEEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 50  GDVEEVVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_002307496.1| predicted protein [Populus trichocarpa]
           gi|359493111|ref|XP_002266320.2| PREDICTED: U6
           snRNA-associated Sm-like protein LSm3-like isoform 1
           [Vitis vinifera] gi|222856945|gb|EEE94492.1| predicted
           protein [Populus trichocarpa]
          Length = 97

 Score = 97.1 bits (240), Expect(2) = 3e-41
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = +2

Query: 224 GDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 367
           GDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 50  GDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97



 Score = 96.7 bits (239), Expect(2) = 3e-41
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = +1

Query: 4   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 150
           MA+EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 49


>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
           [Lotus japonicus]
          Length = 97

 Score = 96.3 bits (238), Expect(2) = 9e-41
 Identities = 48/49 (97%), Positives = 48/49 (97%)
 Frame = +1

Query: 4   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 150
           MA EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   MAAEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 49



 Score = 95.9 bits (237), Expect(2) = 9e-41
 Identities = 47/48 (97%), Positives = 48/48 (100%)
 Frame = +2

Query: 224 GDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 367
           GDVEEIVTTVEIDDETYEEIVRTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 50  GDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|222842648|gb|EEE80195.1|
           predicted protein [Populus trichocarpa]
          Length = 97

 Score = 96.7 bits (239), Expect(2) = 1e-40
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = +1

Query: 4   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 150
           MA+EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMIL 49



 Score = 95.1 bits (235), Expect(2) = 1e-40
 Identities = 47/48 (97%), Positives = 47/48 (97%)
 Frame = +2

Query: 224 GDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 367
           GDVEEIVTTVEIDDETYEEIVR TRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 50  GDVEEIVTTVEIDDETYEEIVRATRRTVPFLFVRGDGVILVSPPLRTA 97


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