BLASTX nr result

ID: Glycyrrhiza24_contig00004534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004534
         (1586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593526.1| hypothetical protein MTR_2g013110 [Medicago ...   447   e-123
ref|XP_003543058.1| PREDICTED: CBS domain-containing protein CBS...   432   e-118
ref|XP_003545910.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-c...   428   e-117
gb|ACU22924.1| unknown [Glycine max]                                  425   e-116
ref|XP_002269338.1| PREDICTED: CBS domain-containing protein CBS...   384   e-104

>ref|XP_003593526.1| hypothetical protein MTR_2g013110 [Medicago truncatula]
            gi|124360612|gb|ABN08611.1| CBS [Medicago truncatula]
            gi|355482574|gb|AES63777.1| hypothetical protein
            MTR_2g013110 [Medicago truncatula]
          Length = 396

 Score =  447 bits (1149), Expect = e-123
 Identities = 245/419 (58%), Positives = 288/419 (68%), Gaps = 1/419 (0%)
 Frame = -1

Query: 1460 MAVRLSSLSGNEVSDLCLGKPALRSLCVTDAVADALSALKRTGDTYLSIWNCHHSLTRGG 1281
            MAVRLS LS +EVSDL LGKP LRS+ +TD +ADAL+A+K+  ++Y+S+WNCHHS+ R  
Sbjct: 1    MAVRLS-LSTHEVSDLSLGKPPLRSISITDTIADALNAIKKHAESYISVWNCHHSINRKP 59

Query: 1280 DTNTDHNNXXXXXXXXXKGDSIDCKCIGRVCMVDIICFLCKPENLSSPATAXXXXXXXXX 1101
                   +               CKCIG+VCMVDIICFLC+PENLSSPA A         
Sbjct: 60   PQTLIKEDF-----------EFHCKCIGKVCMVDIICFLCRPENLSSPAAALRSPVPILL 108

Query: 1100 XXXXXXXXXVQHLQPNASLLEAIEAMYDGVQNLVIPIRDENENNKRSRKRGNTIEALDTG 921
                      +H+QPNASLLE I+ M +GVQN+V+PI DEN    + +K+ N I   D  
Sbjct: 109  ADDRSSLV--RHIQPNASLLETIDVMDEGVQNVVMPISDEN----KCKKKENEILHNDK- 161

Query: 920  NTHNYCWLTQEDVIRYLLNSIGAFSPTPASPINTLGVIDTLNLFALYYXXXXXXXXXXXX 741
                YCWL+QEDV+RYLLNSIG FS TPA  I+ L +IDT NL+ LY+            
Sbjct: 162  --RAYCWLSQEDVMRYLLNSIGTFSDTPAQSIDKLDIIDTQNLYFLYFDDPASSALELLT 219

Query: 740  XXLVHQSSVAVVDAQGKLLGEISPFMLNSCDEAVAPAMATLSAGDLLTYIDSGGPPEDLV 561
              +VHQSSVAVVD QGKL+GEISPFMLNSCDE   PA+ATLSAGDLL YID GGPPEDLV
Sbjct: 220  ASIVHQSSVAVVDPQGKLIGEISPFMLNSCDEIDVPAIATLSAGDLLAYIDCGGPPEDLV 279

Query: 560  QLVKERLQEQNL-GAAMELLGEESSIVLXXXXXXXXXXXXXXXXXXXXSGKNWKLGGYSA 384
            QLVKERL EQNL  AA+ELLGE S +                       GKNWKLGG+S+
Sbjct: 280  QLVKERLHEQNLDNAAVELLGEGSEL-----SSWSSFSSTSSEEDICSLGKNWKLGGFSS 334

Query: 383  RVVRRSEAIVCYPWSSLVAVMIQALAHRVNYVWVVQEDGTLTGIVTFQGMMKIFREHLK 207
            R++RRSEAIVCYPWSSLVAVMIQAL+HRV+YVWVVQEDGTL GIVTFQ M++IFREHLK
Sbjct: 335  RIMRRSEAIVCYPWSSLVAVMIQALSHRVSYVWVVQEDGTLYGIVTFQSMLRIFREHLK 393


>ref|XP_003543058.1| PREDICTED: CBS domain-containing protein CBSX5-like [Glycine max]
          Length = 398

 Score =  432 bits (1110), Expect = e-118
 Identities = 242/420 (57%), Positives = 280/420 (66%), Gaps = 9/420 (2%)
 Frame = -1

Query: 1439 LSGNEVSDLCLGKPALRSLCVTDAVADALSALKRTGDTYLSIWNCHHSLTRGGDTNTDHN 1260
            LSG+E+SDLCLGKP LRSL V D VADAL+ALKR  DTY+S+WNC+HS  R         
Sbjct: 6    LSGHELSDLCLGKPPLRSLSVRDTVADALAALKRIDDTYVSVWNCNHSFIRKQQPQIKSQ 65

Query: 1259 NXXXXXXXXXKGDSIDCKCIGRVCMVDIICFLCKPENLSSPATAXXXXXXXXXXXXXXXX 1080
                            C CIG+VCMVDIICFL KP+NLSSP+ A                
Sbjct: 66   EQLQCC----------CTCIGKVCMVDIICFLSKPQNLSSPSAAFLSPISALLHDNSAVL 115

Query: 1079 XXVQHLQPNASLLEAIEAMYDGVQNLVIPIRDENENNKRSRKRGNTIEALDTGNTHN--- 909
               +HL P ASLLEAI+ M++GVQNLVIPI+ +              E+L++ N H+   
Sbjct: 116  V--RHLPPTASLLEAIDVMHEGVQNLVIPIQIQ-------------FESLNSNNVHHNDN 160

Query: 908  --YCWLTQEDVIRYLLNSIGAFSPTPASPINTLGVIDTLNLFALYYXXXXXXXXXXXXXX 735
              YCWLTQEDV RYLLNSIG FSPTP +PINTLGVIDT NLFA+ Y              
Sbjct: 161  TTYCWLTQEDVFRYLLNSIGVFSPTPGNPINTLGVIDTQNLFAVCYDDPASSILDLLALS 220

Query: 734  LVHQSSVAVVDAQGKLLGEISPFMLNSCDEAVAPAMATLSAGDLLTYIDSGGPPEDLVQL 555
            L++QSS+A+VD  GK  GEISP MLNSCDE+V PA+ATLSAGDL  YID GGPPEDLVQL
Sbjct: 221  LLYQSSIAIVDPNGKFGGEISPVMLNSCDESVVPAIATLSAGDLTAYIDCGGPPEDLVQL 280

Query: 554  VKER----LQEQNLGAAMELLGEESSIVLXXXXXXXXXXXXXXXXXXXXSGKNWKLGGYS 387
            VKER    ++EQNL   +ELLG+E++                       SGKNWKLGGYS
Sbjct: 281  VKERVKEKVEEQNL---LELLGDETTGT--GLTSWSSFSSSCSSDEEFCSGKNWKLGGYS 335

Query: 386  ARVVRRSEAIVCYPWSSLVAVMIQALAHRVNYVWVVQEDGTLTGIVTFQGMMKIFREHLK 207
            ARV RRSEAIVCY WSSLVAVMIQALAHRV+YVWVV+EDGTLTGIVTFQGM+K+FR+HLK
Sbjct: 336  ARVGRRSEAIVCYRWSSLVAVMIQALAHRVSYVWVVEEDGTLTGIVTFQGMLKVFRDHLK 395


>ref|XP_003545910.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-containing protein
            CBSX5-like [Glycine max]
          Length = 395

 Score =  428 bits (1101), Expect = e-117
 Identities = 239/420 (56%), Positives = 281/420 (66%), Gaps = 9/420 (2%)
 Frame = -1

Query: 1439 LSGNEVSDLCLGKPALRSLCVTDAVADALSALKRTGDTYLSIWNCHHSLTRGGDTNTDHN 1260
            LSG+E+SDLCLGKP LR+L V D VADAL+ALKR  DTY+S+WNC+HS  R         
Sbjct: 5    LSGHELSDLCLGKPPLRALSVRDTVADALAALKRIDDTYVSVWNCNHSFIRKQQPQIQSQ 64

Query: 1259 NXXXXXXXXXKGDSIDCKCIGRVCMVDIICFLCKPENLSSPATAXXXXXXXXXXXXXXXX 1080
            N               C CIG+VCM+DIICFL KP++LSSP+ A                
Sbjct: 65   NQCC------------CTCIGKVCMLDIICFLSKPQSLSSPSAALHSPISAALQDNSAVL 112

Query: 1079 XXVQHLQPNASLLEAIEAMYDGVQNLVIPIRDENENNKRSRKRGNTIEALDTGNTHN--- 909
                HL P+ASLLEAI+ M +GVQNLVIPI+             N +E+LD+ N H+   
Sbjct: 113  VL--HLPPSASLLEAIDVMQEGVQNLVIPIQ-------------NQVESLDSNNVHHNNN 157

Query: 908  --YCWLTQEDVIRYLLNSIGAFSPTPASPINTLGVIDTLNLFALYYXXXXXXXXXXXXXX 735
              YCWLTQEDV+RYLLNSIG FSPTP +PINTLGVIDT NLFA+ Y              
Sbjct: 158  TTYCWLTQEDVLRYLLNSIGVFSPTPGNPINTLGVIDTKNLFAVCYDDPASSILDLLALS 217

Query: 734  LVHQSSVAVVDAQGKLLGEISPFMLNSCDEAVAPAMATLSAGDLLTYIDSGGPPEDLVQL 555
            L++QSSVA+VD  GK  GEISP MLNS DE+V PA+ATLSAGDL  YID GGPPEDLVQL
Sbjct: 218  LIYQSSVAIVDPNGKFGGEISPVMLNSYDESVVPAIATLSAGDLTAYIDCGGPPEDLVQL 277

Query: 554  VKER----LQEQNLGAAMELLGEESSIVLXXXXXXXXXXXXXXXXXXXXSGKNWKLGGYS 387
            VKER    ++EQN+   +ELLG+E++                       SGKNWKLGGYS
Sbjct: 278  VKERVKEKVEEQNM---LELLGDETT--RTGLTSWSSFSSSCSSDEEFCSGKNWKLGGYS 332

Query: 386  ARVVRRSEAIVCYPWSSLVAVMIQALAHRVNYVWVVQEDGTLTGIVTFQGMMKIFREHLK 207
            ARV RRSEAIVC+ WSSLVAVMIQAL+HRV+YVWVV+EDGTLTGIVTFQGM+K+FR+HLK
Sbjct: 333  ARVGRRSEAIVCHRWSSLVAVMIQALSHRVSYVWVVEEDGTLTGIVTFQGMLKVFRDHLK 392


>gb|ACU22924.1| unknown [Glycine max]
          Length = 398

 Score =  425 bits (1093), Expect = e-116
 Identities = 238/417 (57%), Positives = 275/417 (65%), Gaps = 4/417 (0%)
 Frame = -1

Query: 1445 SSLSGNEVSDLCLGKPALRSLCVTDAVADALSALKRTGDTYLSIWNCHHSLTRGGDTNTD 1266
            + LSG+E+SDLCLGKP  RSL V D VADAL+ALKR  DTY+S+WNC+HS  R       
Sbjct: 4    AGLSGHELSDLCLGKPPPRSLSVRDTVADALAALKRIDDTYVSVWNCNHSFIRKQQPQIK 63

Query: 1265 HNNXXXXXXXXXKGDSIDCKCIGRVCMVDIICFLCKPENLSSPATAXXXXXXXXXXXXXX 1086
                              C CIG+VCMVDIICFL KP+NLSSP+ A              
Sbjct: 64   SQEQLQCC----------CTCIGKVCMVDIICFLSKPQNLSSPSAAFLSPISALLHDNSA 113

Query: 1085 XXXXVQHLQPNASLLEAIEAMYDGVQNLVIPIRDENENNKRSRKRGNTIEALDTGNTHNY 906
                 +HL P  SLLEAI+ M++GVQNLVIPI+ + E+   +    N        N   Y
Sbjct: 114  VLV--RHLPPTTSLLEAIDVMHEGVQNLVIPIQIQFESLNSNNVHHN--------NNTTY 163

Query: 905  CWLTQEDVIRYLLNSIGAFSPTPASPINTLGVIDTLNLFALYYXXXXXXXXXXXXXXLVH 726
            CWLTQEDV RYLLNSIG FSPTP +PINTLGVIDT NLFA+ Y              L++
Sbjct: 164  CWLTQEDVFRYLLNSIGVFSPTPGNPINTLGVIDTQNLFAVCYDDPASSILDLLALSLLY 223

Query: 725  QSSVAVVDAQGKLLGEISPFMLNSCDEAVAPAMATLSAGDLLTYIDSGGPPEDLVQLVKE 546
            QSS+A+VD  GK  GEISP MLNSCDE+V PA+ATLSAGDL  YID GGPPEDLVQLVKE
Sbjct: 224  QSSIAIVDPNGKFGGEISPVMLNSCDESVVPAIATLSAGDLTAYIDCGGPPEDLVQLVKE 283

Query: 545  R----LQEQNLGAAMELLGEESSIVLXXXXXXXXXXXXXXXXXXXXSGKNWKLGGYSARV 378
            R    ++EQNL   +ELLG+E++                       SGKNWKLGGYSA V
Sbjct: 284  RVKEKVEEQNL---LELLGDETTGT--GLTSWSSFSSSCSSDEEFCSGKNWKLGGYSAGV 338

Query: 377  VRRSEAIVCYPWSSLVAVMIQALAHRVNYVWVVQEDGTLTGIVTFQGMMKIFREHLK 207
             RRSEAIVCY WSSLVAVMIQALAHRV+YVWVV+EDGTLTGIVTFQGM+K+FR+HLK
Sbjct: 339  GRRSEAIVCYRWSSLVAVMIQALAHRVSYVWVVEEDGTLTGIVTFQGMLKVFRDHLK 395


>ref|XP_002269338.1| PREDICTED: CBS domain-containing protein CBSX5 [Vitis vinifera]
          Length = 384

 Score =  384 bits (985), Expect = e-104
 Identities = 207/412 (50%), Positives = 265/412 (64%)
 Frame = -1

Query: 1442 SLSGNEVSDLCLGKPALRSLCVTDAVADALSALKRTGDTYLSIWNCHHSLTRGGDTNTDH 1263
            SL G+EVSDLCLGKPALRSL V+  VADAL+ALKR+GD YLS+W+C H+       N  H
Sbjct: 4    SLLGHEVSDLCLGKPALRSLPVSATVADALAALKRSGDAYLSVWSCDHT----SKINKSH 59

Query: 1262 NNXXXXXXXXXKGDSIDCKCIGRVCMVDIICFLCKPENLSSPATAXXXXXXXXXXXXXXX 1083
                            DC+CIG++CMVD++CFLC+ +NLS P+ A               
Sbjct: 60   LE--------------DCRCIGKICMVDVVCFLCREDNLSCPSDALQSPLSLLLPKVPGL 105

Query: 1082 XXXVQHLQPNASLLEAIEAMYDGVQNLVIPIRDENENNKRSRKRGNTIEALDTGNTHNYC 903
                +HL+PN+ LLEAI+ M +G QN+VIPI+      K+   + +    L  G    +C
Sbjct: 106  V---RHLKPNSRLLEAIDLMLEGAQNIVIPIQSRTNPRKKLVPKPSFNSTLHNGV--EFC 160

Query: 902  WLTQEDVIRYLLNSIGAFSPTPASPINTLGVIDTLNLFALYYXXXXXXXXXXXXXXLVHQ 723
            WLTQEDV+R+LLNSIG+FSP P   I +L +IDT N+ ++YY              L++Q
Sbjct: 161  WLTQEDVVRFLLNSIGSFSPLPGLTIESLNIIDTENIPSVYYHDPASSALTAISQSLINQ 220

Query: 722  SSVAVVDAQGKLLGEISPFMLNSCDEAVAPAMATLSAGDLLTYIDSGGPPEDLVQLVKER 543
            +SVAV+D + KL+GEISPF L  CDE VA A+ATLSAGDL+ YID GGPPEDLVQLVK R
Sbjct: 221  TSVAVLDQENKLVGEISPFTLACCDETVAAAIATLSAGDLMAYIDCGGPPEDLVQLVKAR 280

Query: 542  LQEQNLGAAMELLGEESSIVLXXXXXXXXXXXXXXXXXXXXSGKNWKLGGYSARVVRRSE 363
            L+E+ LGA ++L+ EE S                        G+    G YSAR+ RRSE
Sbjct: 281  LEERKLGAFLDLMDEEFS-----------YSSSSSSDEEFGFGRRGGSGKYSARMARRSE 329

Query: 362  AIVCYPWSSLVAVMIQALAHRVNYVWVVQEDGTLTGIVTFQGMMKIFREHLK 207
            AIVCYPWSSL+AVMIQALAHRV+YVWV++ED +L GIVTF G+ K+FR+HL+
Sbjct: 330  AIVCYPWSSLMAVMIQALAHRVSYVWVIEEDWSLAGIVTFSGIFKVFRQHLR 381


Top