BLASTX nr result

ID: Glycyrrhiza24_contig00004502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004502
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552155.1| PREDICTED: RING-H2 finger protein ATL33-like...   198   2e-48
gb|ACU23940.1| unknown [Glycine max]                                  192   1e-46
ref|XP_003604974.1| RING-H2 finger protein ATL1N [Medicago trunc...   167   3e-39
ref|XP_002527730.1| RING-H2 finger protein ATL2J, putative [Rici...   156   8e-36
ref|XP_002304737.1| predicted protein [Populus trichocarpa] gi|1...   150   6e-34

>ref|XP_003552155.1| PREDICTED: RING-H2 finger protein ATL33-like [Glycine max]
          Length = 207

 Score =  198 bits (503), Expect = 2e-48
 Identities = 107/183 (58%), Positives = 124/183 (67%)
 Frame = -1

Query: 784 SSVFQITVLXXXXXXXPFDGGSSHVDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSSR 605
           +SVF  T L        F G  S VD SPLEFLLAL+A+VTIPAL+YTFIFAFGC S  R
Sbjct: 33  NSVFPSTFLPFPPPPP-FAGPPSSVDLSPLEFLLALLAVVTIPALIYTFIFAFGCPSRRR 91

Query: 604 RQSNPGETSRESSVASELSRHDVESVPAGEVSGVKYQKEAHAREIGGECPVCLSAFADGE 425
           R+     +  E SVASE+S H    + A   + VKY+KEAHA+EIGGECPVCLS FA+GE
Sbjct: 92  RRE---PSYGEPSVASEVSHHQEFEIAAVADTEVKYRKEAHAKEIGGECPVCLSVFANGE 148

Query: 424 EVRQLSACKHSFHASCIDLWLSNHSNCPICRXXXXXXXXAVKSSGSNRDGDPQQGHRDAS 245
           EVRQLSACKHSFHASCIDLWLSNHSNCPICR           ++    DGD    HR+  
Sbjct: 149 EVRQLSACKHSFHASCIDLWLSNHSNCPICR------ATIAVTTTKTGDGDSHLSHREPD 202

Query: 244 SSN 236
           ++N
Sbjct: 203 ATN 205


>gb|ACU23940.1| unknown [Glycine max]
          Length = 207

 Score =  192 bits (488), Expect = 1e-46
 Identities = 105/183 (57%), Positives = 122/183 (66%)
 Frame = -1

Query: 784 SSVFQITVLXXXXXXXPFDGGSSHVDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSSR 605
           +SVF  T L        F G  S VD SPLEFLLAL+A+VTIPAL+YTFIFAFGC S  R
Sbjct: 33  NSVFPSTFLPFPPPPP-FAGPPSSVDLSPLEFLLALLAVVTIPALIYTFIFAFGCPSRRR 91

Query: 604 RQSNPGETSRESSVASELSRHDVESVPAGEVSGVKYQKEAHAREIGGECPVCLSAFADGE 425
           R+     +  E SVAS +S H    + A   + VKY+KEA A+EIGGECPVCLS FA+GE
Sbjct: 92  RRE---PSYGEPSVASGVSHHQEFEIAAVADTEVKYRKEARAKEIGGECPVCLSVFANGE 148

Query: 424 EVRQLSACKHSFHASCIDLWLSNHSNCPICRXXXXXXXXAVKSSGSNRDGDPQQGHRDAS 245
           EVRQLSACKHSFHASCIDLWLSNHSNCPICR           ++    DGD    HR+  
Sbjct: 149 EVRQLSACKHSFHASCIDLWLSNHSNCPICR------ATIAVTTTKTGDGDSHLSHREPD 202

Query: 244 SSN 236
           ++N
Sbjct: 203 ATN 205


>ref|XP_003604974.1| RING-H2 finger protein ATL1N [Medicago truncatula]
           gi|355506029|gb|AES87171.1| RING-H2 finger protein ATL1N
           [Medicago truncatula]
          Length = 188

 Score =  167 bits (423), Expect = 3e-39
 Identities = 90/165 (54%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
 Frame = -1

Query: 733 FDGGSSHVDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSSRRQSNPGETSRESSVASE 554
           F   S  VD SPLEFLLALIAIVTIPAL+YTFIFAFG S   RR   P + S E S AS+
Sbjct: 29  FPDSSRSVDLSPLEFLLALIAIVTIPALIYTFIFAFGFSFCRRR---PEQNSGELSFASD 85

Query: 553 LSRHDVESVPAGEVSGVKYQKEAHAREIGGECPVCLSAFADGEEVRQLSACKHSFHASCI 374
               D+ +     VS  KY+K+AH +E GG+CPVCLS F DGE++R+LS CKH FHA CI
Sbjct: 86  ----DLTNGGGASVSDFKYRKDAHVKETGGDCPVCLSVFVDGEKLRELSCCKHYFHADCI 141

Query: 373 DLWLSNHSNCPICRXXXXXXXXAVKSSGSN-RDGDPQQGHRDASS 242
           DLWL N S+CPICR         + ++ +  RD D  QG  DAS+
Sbjct: 142 DLWLGNRSSCPICRATVAGKRRNMSAAAAPVRDNDLMQGLPDAST 186


>ref|XP_002527730.1| RING-H2 finger protein ATL2J, putative [Ricinus communis]
           gi|223532871|gb|EEF34643.1| RING-H2 finger protein
           ATL2J, putative [Ricinus communis]
          Length = 200

 Score =  156 bits (394), Expect = 8e-36
 Identities = 79/166 (47%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
 Frame = -1

Query: 712 VDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSSRRQSNPGETSRESSVASELSRHDVE 533
           VD SPLEF+LALIA++ IPAL+YTF F+  C     R      T  +   AS  S  D  
Sbjct: 24  VDLSPLEFILALIAVIAIPALIYTFFFSIKCPPGPFRSRRRHRTDSDEFFAS--SNDDNN 81

Query: 532 SVPAGE---VSGVKYQKEAHAREIGGECPVCLSAFADGEEVRQLSACKHSFHASCIDLWL 362
           S P+     VS VKYQK+ H ++IG ECPVCLS +A+GEEV+QLS+CKHSFHASCID+WL
Sbjct: 82  SSPSENKDGVSDVKYQKDTHVKDIGSECPVCLSVYAEGEEVKQLSSCKHSFHASCIDMWL 141

Query: 361 SNHSNCPICRXXXXXXXXAVKSSGSNRDGDPQQGHRDASSSNSQTQ 224
           ++HSNCP+CR         VK   +N + +    +  +S++ S  +
Sbjct: 142 NSHSNCPVCR-----ASVPVKKPNNNNNNNNNNNNTGSSNNVSSAR 182


>ref|XP_002304737.1| predicted protein [Populus trichocarpa] gi|118483943|gb|ABK93860.1|
           unknown [Populus trichocarpa]
           gi|222842169|gb|EEE79716.1| predicted protein [Populus
           trichocarpa]
          Length = 195

 Score =  150 bits (378), Expect = 6e-34
 Identities = 77/171 (45%), Positives = 104/171 (60%), Gaps = 14/171 (8%)
 Frame = -1

Query: 712 VDFSPLEFLLALIAIVTIPALVYTFIFAFGCSSSS-----RRQSNPGETSRESSVASELS 548
           VD +PLEF+LA IA++ +PAL+YTF F+  C         R +S+    S   SV+  + 
Sbjct: 23  VDLAPLEFILAFIAVIAVPALIYTFFFSIKCPPGPFRRRRRHRSSSSIISETLSVSEIVD 82

Query: 547 RHDVESVPAGE----VSGVKYQKEAHAREIGGECPVCLSAFADGEEVRQLSACKHSFHAS 380
             D+    +G+    VS VK+QK+ H +++G ECPVCLS F+DGE V+QLS CKHSFHAS
Sbjct: 83  TDDLNGTTSGDQKERVSDVKFQKDTHLQDVGSECPVCLSVFSDGEAVKQLSVCKHSFHAS 142

Query: 379 CIDLWLSNHSNCPICR-----XXXXXXXXAVKSSGSNRDGDPQQGHRDASS 242
           CID+WLS++SNCP+CR                S+  N   D QQG  DA+S
Sbjct: 143 CIDMWLSSNSNCPVCRASTAPPAKHPGKNPSSSTSRNNVDDLQQGLPDAAS 193


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