BLASTX nr result

ID: Glycyrrhiza24_contig00004467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004467
         (2088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleop...   686   0.0  
ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleop...   679   0.0  
gb|ACU24489.1| unknown [Glycine max]                                  655   0.0  
ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi...   627   e-177
ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161

>ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
            max]
          Length = 483

 Score =  686 bits (1770), Expect = 0.0
 Identities = 357/454 (78%), Positives = 370/454 (81%)
 Frame = -1

Query: 1854 MSEGVEIDERVDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 1675
            MSEG EIDERVDL                                              G
Sbjct: 1    MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGVEEENAEGSFEEDEYEDSAAEAG 60

Query: 1674 RKDQLPEAEKSEIATEFAEGELKPSLIXXXXXXXXXELLALPPHGSEVFIGGLPRDACED 1495
             KDQLPEAEKS+IATEF + E K S I         ELLALPPHGSEVFIGGLPRD CED
Sbjct: 61   GKDQLPEAEKSDIATEFGDDEQKLSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCED 120

Query: 1494 DLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKTLRCS 1315
            DLRELC+PMGDILEVRLMKDRDTGE+KGYAFVAFKTKEVAQKAIE+IH+KEFKGKTLRCS
Sbjct: 121  DLRELCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRCS 180

Query: 1314 LSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 1135
            LSETKHRLFIGNVPKTWTED+FRKVVEGVGPGVE IELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181  LSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 1134 CADYSRQKMSNASFKLDGNTPTVTWADPKNSPDNSASSQVKALYVKNIPENVTTEQLKEL 955
            CADYSRQKM+++SFKLDGNTPTVTWADPKNSPD+SASSQVKALYVKNIPENVTTEQLKEL
Sbjct: 241  CADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKEL 300

Query: 954  FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 775
            FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA
Sbjct: 301  FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 360

Query: 774  EKKPDGGYAXXXXXXXXXXXXXXXXGSFSGNVYGGSLGAGYGVATGYQQPMIYGRGPMPA 595
            +KKPDGGYA                G+FSGN Y GSLGAGYGVA GYQQPMIYGRGPMPA
Sbjct: 361  DKKPDGGYA-YNPGLHPNHIPHPAYGNFSGNPY-GSLGAGYGVAAGYQQPMIYGRGPMPA 418

Query: 594  GMQMVPMVLPDGRIGYVLQQPGVQVPAPRPRRID 493
            GMQMVPMVLPDGRIGYVLQQPGVQVPA RPRRID
Sbjct: 419  GMQMVPMVLPDGRIGYVLQQPGVQVPATRPRRID 452


>ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
            max]
          Length = 483

 Score =  679 bits (1753), Expect = 0.0
 Identities = 354/454 (77%), Positives = 367/454 (80%)
 Frame = -1

Query: 1854 MSEGVEIDERVDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 1675
            MSEG EIDERVDL                                              G
Sbjct: 1    MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSAAEAG 60

Query: 1674 RKDQLPEAEKSEIATEFAEGELKPSLIXXXXXXXXXELLALPPHGSEVFIGGLPRDACED 1495
             KDQLPEAEKS+IATEF + E K S I         ELLALPPHGSEVFIGGLPRD CED
Sbjct: 61   GKDQLPEAEKSDIATEFGDDEQKLSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCED 120

Query: 1494 DLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKTLRCS 1315
            DLRELC+PMGDILEVRLMKDRDTGE KGYAFVAFKTKEVAQKAIE+IH+KEFKGKTLRCS
Sbjct: 121  DLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRCS 180

Query: 1314 LSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 1135
            LSETKHRLFIGNVPKTWTED+FRKVVEGVGPGVE IELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181  LSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 1134 CADYSRQKMSNASFKLDGNTPTVTWADPKNSPDNSASSQVKALYVKNIPENVTTEQLKEL 955
            CADYSRQKM+++SFKLDGNTPTVTWADPKNSPD+SASSQVKALYVKNIPENVTTEQLKEL
Sbjct: 241  CADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKEL 300

Query: 954  FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 775
            FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA
Sbjct: 301  FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 360

Query: 774  EKKPDGGYAXXXXXXXXXXXXXXXXGSFSGNVYGGSLGAGYGVATGYQQPMIYGRGPMPA 595
            +KKPDGGYA                G+FSGN Y GSLGAGYGVA GYQQPMIYGRGPMPA
Sbjct: 361  DKKPDGGYA-YNPGLHPNHVPHPAYGNFSGNPY-GSLGAGYGVAAGYQQPMIYGRGPMPA 418

Query: 594  GMQMVPMVLPDGRIGYVLQQPGVQVPAPRPRRID 493
            GMQMVPM+LPDGRIGYVLQQPGVQVP  RPRR D
Sbjct: 419  GMQMVPMMLPDGRIGYVLQQPGVQVPPARPRRND 452


>gb|ACU24489.1| unknown [Glycine max]
          Length = 439

 Score =  655 bits (1689), Expect = 0.0
 Identities = 341/441 (77%), Positives = 354/441 (80%)
 Frame = -1

Query: 1854 MSEGVEIDERVDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 1675
            MSEG EIDERVDL                                              G
Sbjct: 1    MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSAAEAG 60

Query: 1674 RKDQLPEAEKSEIATEFAEGELKPSLIXXXXXXXXXELLALPPHGSEVFIGGLPRDACED 1495
             KDQLPEAEKS+IATEF + E K S I         ELLALPPHGSEVFIGGLPRD CED
Sbjct: 61   GKDQLPEAEKSDIATEFGDDEQKLSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCED 120

Query: 1494 DLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKTLRCS 1315
            DLRELC+PMGDILEVRLMKDRDTGE KGYAFVAFK KEVAQKAIE+IH+KEFKGKTLRCS
Sbjct: 121  DLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKAKEVAQKAIEEIHSKEFKGKTLRCS 180

Query: 1314 LSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 1135
            LSETKHRLFIGNVPKTWTED+FRKVVEGVGPGVE IELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181  LSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 1134 CADYSRQKMSNASFKLDGNTPTVTWADPKNSPDNSASSQVKALYVKNIPENVTTEQLKEL 955
            CADYSRQKM+++SFKLDGNTPTVTWADPKNSPD+SASSQVKALYVKNIPENVTTEQLKEL
Sbjct: 241  CADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKEL 300

Query: 954  FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 775
            FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA
Sbjct: 301  FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 360

Query: 774  EKKPDGGYAXXXXXXXXXXXXXXXXGSFSGNVYGGSLGAGYGVATGYQQPMIYGRGPMPA 595
            +KKPDGGYA                G+FSGN Y GSLGAGYGVA GYQQPMIYGRGPMPA
Sbjct: 361  DKKPDGGYA-YNPGLHPNHVPHPAYGNFSGNPY-GSLGAGYGVAAGYQQPMIYGRGPMPA 418

Query: 594  GMQMVPMVLPDGRIGYVLQQP 532
            GMQMVPM+LPDGRIGYVL  P
Sbjct: 419  GMQMVPMMLPDGRIGYVLNNP 439


>ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi|355501612|gb|AES82815.1|
            RNA-binding protein [Medicago truncatula]
          Length = 479

 Score =  627 bits (1617), Expect = e-177
 Identities = 329/457 (71%), Positives = 355/457 (77%), Gaps = 3/457 (0%)
 Frame = -1

Query: 1854 MSEGVEIDERVDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 1675
            MSEG EID+RVDL                                              G
Sbjct: 1    MSEGAEIDDRVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEETAAEAG 60

Query: 1674 RKDQLPEAEKSEIATEFAEGELKPSLIXXXXXXXXXELLALPPHGSEVFIGGLPRDACED 1495
            +KDQ PE EKS+   E  E ELKP+LI         ELL+ PPHGSEVFIGGLPRD  +D
Sbjct: 61   QKDQFPEGEKSDHGAE--EDELKPALIDEEEREKHDELLSRPPHGSEVFIGGLPRDTSDD 118

Query: 1494 DLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKTLRCS 1315
            D+RELC+PMGDI+E++L+KDR+TGESKGYAFV +KTKEVAQKAI+DIHNKEFKGKTLRC 
Sbjct: 119  DVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDDIHNKEFKGKTLRCL 178

Query: 1314 LSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 1135
            LSETKHRLFIGN+PKTWTEDEFRK VEGVGPGVE+I+LIKDPQN SRNRGFAFVLYYNNA
Sbjct: 179  LSETKHRLFIGNIPKTWTEDEFRKAVEGVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNA 238

Query: 1134 CADYSRQKMSNASFKLDGNTPTVTWADPKNSPDNS-ASSQVKALYVKNIPENVTTEQLKE 958
            CAD+SRQKMS+  FKLDG TPTVTWADPK SPD S A+SQVKALYVKNIPENVTTEQLKE
Sbjct: 239  CADFSRQKMSSVGFKLDGITPTVTWADPKTSPDQSAAASQVKALYVKNIPENVTTEQLKE 298

Query: 957  LFRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQ 778
            LFRRHGEVTKVVMPPGKA GKRDFGFIHYAERSSALKAVK+TEKYEIDGQ LEVV+AKPQ
Sbjct: 299  LFRRHGEVTKVVMPPGKASGKRDFGFIHYAERSSALKAVKETEKYEIDGQALEVVIAKPQ 358

Query: 777  AEKKPDGGYAXXXXXXXXXXXXXXXXGSFSGNVYGGSLGAGYGV--ATGYQQPMIYGRGP 604
            AEKKPDGGYA                G+FSGN+Y GS+GAGYGV  A  YQQPMIYGRGP
Sbjct: 359  AEKKPDGGYA-YNPGLHPNHLPHPGYGNFSGNLY-GSVGAGYGVAAAAAYQQPMIYGRGP 416

Query: 603  MPAGMQMVPMVLPDGRIGYVLQQPGVQVPAPRPRRID 493
            MPAGMQMVPMVLPDGRIGYVLQQPGVQVP PRPRR D
Sbjct: 417  MPAGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRND 453


>ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|222861667|gb|EEE99209.1|
            predicted protein [Populus trichocarpa]
          Length = 480

 Score =  573 bits (1478), Expect = e-161
 Identities = 287/397 (72%), Positives = 334/397 (84%), Gaps = 3/397 (0%)
 Frame = -1

Query: 1674 RKDQLPEAEKSEIATEFAEGELKPSL-IXXXXXXXXXELLALPPHGSEVFIGGLPRDACE 1498
            +KDQ PEA++    TE AE E KP+  +         +LLALPPHGSEVFIGGLPRD  E
Sbjct: 60   QKDQSPEADRIVADTEPAEDEQKPTASVNEEEKEKHAQLLALPPHGSEVFIGGLPRDVIE 119

Query: 1497 DDLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKTLRC 1318
            D+LR+LC+P+G+I E+RLMKD+D+GESKG+AFVAFK+KEVA+KAIE++H+K++KGKTLRC
Sbjct: 120  DELRDLCEPIGEIFEIRLMKDKDSGESKGFAFVAFKSKEVARKAIEELHSKDYKGKTLRC 179

Query: 1317 SLSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 1138
            S+SETK+RLFIGNVPK  TEDEFRK++E VGPGVE IELIKDPQ P+RNRGFAF+LYYNN
Sbjct: 180  SISETKNRLFIGNVPKNLTEDEFRKIIEEVGPGVEVIELIKDPQTPTRNRGFAFILYYNN 239

Query: 1137 ACADYSRQKMSNASFKLDGNTPTVTWADPKNSP--DNSASSQVKALYVKNIPENVTTEQL 964
            ACADYSRQKM NA+FKLDG+TPTV+WADPK +P   ++ASSQVKALYVKNIPEN +TEQL
Sbjct: 240  ACADYSRQKMLNANFKLDGHTPTVSWADPKGTPPDHSAASSQVKALYVKNIPENTSTEQL 299

Query: 963  KELFRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAK 784
            K LF+RHG+VTKVVMPPGKA GKRDFGFIHYAERSSALKAV+D EKYEIDGQ+LEVVLAK
Sbjct: 300  KGLFQRHGDVTKVVMPPGKA-GKRDFGFIHYAERSSALKAVRDAEKYEIDGQVLEVVLAK 358

Query: 783  PQAEKKPDGGYAXXXXXXXXXXXXXXXXGSFSGNVYGGSLGAGYGVATGYQQPMIYGRGP 604
            PQA+KKPD  Y                   F+GN Y GSLG G+GVA+ +QQP+IYGRGP
Sbjct: 359  PQADKKPDAAY-PYNAGVHPNPVPLPAYSGFAGNPY-GSLGTGFGVASSFQQPVIYGRGP 416

Query: 603  MPAGMQMVPMVLPDGRIGYVLQQPGVQVPAPRPRRID 493
            MPAGM MVPMVLPDGRIGYVLQQPGVQ+P PRPRR+D
Sbjct: 417  MPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPRPRRVD 453


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