BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004444
         (1665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607248.1| Photosystem II stability/assembly factor HCF...   655   0.0  
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   647   0.0  
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   612   e-173
ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|2...   605   e-171
ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   602   e-170

>ref|XP_003607248.1| Photosystem II stability/assembly factor HCF136 [Medicago truncatula]
            gi|355508303|gb|AES89445.1| Photosystem II
            stability/assembly factor HCF136 [Medicago truncatula]
          Length = 396

 Score =  655 bits (1689), Expect = 0.0
 Identities = 336/401 (83%), Positives = 348/401 (86%), Gaps = 1/401 (0%)
 Frame = -2

Query: 1553 MATLQFTLSDSATLWRRXXXXXXXXXXXSKCIHS-RSRSFVVKAXXXXXXXXXXXRQFIA 1377
            MATLQFT SDS T   R              IHS R RSFVVKA            QFIA
Sbjct: 1    MATLQFTFSDSTTTLCRPLSQLPSSKSTI--IHSPRPRSFVVKASLEPSRTRR---QFIA 55

Query: 1376 ATTAISVLVPSQLAKSEESLSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILE 1197
             TTAISVL+PSQLAKSEE+LSEWERVYLPIDPGVVLLDIAFVP DPNHGFLLGTRQT+LE
Sbjct: 56   ETTAISVLLPSQLAKSEETLSEWERVYLPIDPGVVLLDIAFVPQDPNHGFLLGTRQTLLE 115

Query: 1196 TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLS 1017
            TKDGG TWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYT DAG+SWERIPLS
Sbjct: 116  TKDGGRTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTPDAGESWERIPLS 175

Query: 1016 AQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTVSSGISGA 837
            A+LPGDMVYIKAT +KSAEMVTDEGAIYVTSNRGYNW+AAVQE+VSATLNRTVSSGISGA
Sbjct: 176  AELPGDMVYIKATNEKSAEMVTDEGAIYVTSNRGYNWKAAVQESVSATLNRTVSSGISGA 235

Query: 836  SYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQNMGWRADXXX 657
            SYYTGTFNTVNRSPDGRYVAVSSRGNFY+TWEPGQA+WQPHNRAVARRIQNMGWRAD   
Sbjct: 236  SYYTGTFNTVNRSPDGRYVAVSSRGNFYMTWEPGQAYWQPHNRAVARRIQNMGWRADGGL 295

Query: 656  XXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAGGSGILLRTTNGG 477
                      LSKGTGITEEFEEIPVQSRGFGILDVGYRS +EAWAAGGSGILLRT NGG
Sbjct: 296  WLLVRGGSLFLSKGTGITEEFEEIPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTNNGG 355

Query: 476  KSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 354
            KSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG
Sbjct: 356  KSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 396


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Glycine max]
          Length = 393

 Score =  647 bits (1669), Expect = 0.0
 Identities = 329/401 (82%), Positives = 346/401 (86%), Gaps = 1/401 (0%)
 Frame = -2

Query: 1553 MATLQFTLSDSATLWRRXXXXXXXXXXXSKCIHSRSRSFVVKAXXXXXXXXXXXRQ-FIA 1377
            MATL+ T SDS TL+R                 SR+RS +VKA           R+ FIA
Sbjct: 1    MATLRLTFSDSTTLFRPSLPSTRTF--------SRNRSLIVKASSSEDDFSRSSRRRFIA 52

Query: 1376 ATTAISVLVPSQLAKSEESLSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILE 1197
             T A+SV +P   A+SE++LSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILE
Sbjct: 53   ETAALSVSLPQLTARSEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILE 112

Query: 1196 TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLS 1017
            TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLS
Sbjct: 113  TKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLS 172

Query: 1016 AQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTVSSGISGA 837
            A+LPGDMVYIKATG+KSAEMVTDEGAIYVT+NRGYNWRAAVQETVSATLNRTVSSGISGA
Sbjct: 173  AELPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGA 232

Query: 836  SYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQNMGWRADXXX 657
            SYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ FWQPHNRAVARRIQNMGWRAD   
Sbjct: 233  SYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGL 292

Query: 656  XXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAGGSGILLRTTNGG 477
                      LSKG G+TEEFEE+PVQSRGFGILDVGYRS +EAWAAGGSGILLRTTNGG
Sbjct: 293  WLLVRGGGLYLSKGKGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGG 352

Query: 476  KSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 354
            KSWIRDKAADNIAANLYSVKFID+KKGFVLGNDGVLLRYLG
Sbjct: 353  KSWIRDKAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Cucumis sativus]
            gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            [Cucumis sativus]
          Length = 406

 Score =  612 bits (1578), Expect = e-173
 Identities = 300/345 (86%), Positives = 319/345 (92%), Gaps = 3/345 (0%)
 Frame = -2

Query: 1379 AATTAISV---LVPSQLAKSEESLSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQ 1209
            AA  ++S+   + P Q AKSEESLSEWER+YLPIDPGVVLLDIAFVPDD NHGFLLGTRQ
Sbjct: 62   AAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDMNHGFLLGTRQ 121

Query: 1208 TILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWER 1029
            TILETKDGG TWAPRSIPSAE+EDFNYRFNSISFKGKEGWIVGKP+ILLYTSDAG+SWER
Sbjct: 122  TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 181

Query: 1028 IPLSAQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTVSSG 849
            IPLSAQLPGDMVYIKATG+KSAEMVTDEGAIYVTSN+GYNW+AAVQETVSATLNRTVSSG
Sbjct: 182  IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 241

Query: 848  ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQNMGWRA 669
            ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ FWQPHNRA+ARRIQNMGWRA
Sbjct: 242  ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 301

Query: 668  DXXXXXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAGGSGILLRT 489
            D             LSKGTGI+EEFEE+PVQSRGFGILDVGYRS EEAWAAGGSG+LL+T
Sbjct: 302  DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 361

Query: 488  TNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 354
            TNGG+SW RDKAADNIAANLYSVKFI+DKKGFVLGNDGVLL+YLG
Sbjct: 362  TNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406


>ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|222853557|gb|EEE91104.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  605 bits (1561), Expect = e-171
 Identities = 299/353 (84%), Positives = 319/353 (90%), Gaps = 9/353 (2%)
 Frame = -2

Query: 1385 FIAATTAIS--------VLVPSQL-AKSEESLSEWERVYLPIDPGVVLLDIAFVPDDPNH 1233
            FI+ T ++S        +L P Q  A +E+SLSEWERVYLPIDPGVVLLDIAFVPDD NH
Sbjct: 42   FISQTASLSSLPLLSPLILNPQQANAAAEDSLSEWERVYLPIDPGVVLLDIAFVPDDTNH 101

Query: 1232 GFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTS 1053
            GFLLGTRQTI+ETKDGGNTW  RSIPSAEDEDFNYRFNSISFKGKEGWIVGKP+ILLYT+
Sbjct: 102  GFLLGTRQTIMETKDGGNTWVQRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTA 161

Query: 1052 DAGDSWERIPLSAQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSAT 873
            D+G++WERIPLSAQLPGDMVYIKATG+KSAEMVTDEGAIY+TSNRGYNWRAAVQE+VSAT
Sbjct: 162  DSGETWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYITSNRGYNWRAAVQESVSAT 221

Query: 872  LNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARR 693
            LNRTVSSGISGASYYTGTFNTVNRSP+G YVAVSSRGNFYLTWEPGQAFWQPHNRA+ARR
Sbjct: 222  LNRTVSSGISGASYYTGTFNTVNRSPNGNYVAVSSRGNFYLTWEPGQAFWQPHNRAIARR 281

Query: 692  IQNMGWRADXXXXXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAG 513
            IQNMGWRAD             LSKGTGI+EEFEEIPVQSRGFGILDVGYRS EEAWAAG
Sbjct: 282  IQNMGWRADGGLWLLVRGGGLYLSKGTGISEEFEEIPVQSRGFGILDVGYRSKEEAWAAG 341

Query: 512  GSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 354
            GSG+LLRTTNGGK+W RDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG
Sbjct: 342  GSGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 394


>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic [Vitis vinifera]
            gi|297737938|emb|CBI27139.3| unnamed protein product
            [Vitis vinifera]
          Length = 404

 Score =  602 bits (1553), Expect = e-170
 Identities = 303/348 (87%), Positives = 315/348 (90%), Gaps = 5/348 (1%)
 Frame = -2

Query: 1382 IAATTAISV----LVPSQLAKSEESL-SEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLG 1218
            +A T AISV    L     AKSEE L SEWERVYLPIDPGVVLLDIAFVPDD +HGFLLG
Sbjct: 57   LAETAAISVAPLILGIEPPAKSEEPLLSEWERVYLPIDPGVVLLDIAFVPDDLSHGFLLG 116

Query: 1217 TRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDS 1038
            TRQTI+ETKDGGNTW PRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAG+S
Sbjct: 117  TRQTIMETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGES 176

Query: 1037 WERIPLSAQLPGDMVYIKATGDKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTV 858
            WERIPLSAQLPGD+VYIKATG+KSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTV
Sbjct: 177  WERIPLSAQLPGDIVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTV 236

Query: 857  SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAFWQPHNRAVARRIQNMG 678
            SSGISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQ +WQPHNRAVARRIQNMG
Sbjct: 237  SSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMG 296

Query: 677  WRADXXXXXXXXXXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYRSPEEAWAAGGSGIL 498
            WRAD             LSKGTGI+E+FEEIPVQSRGFGILDVGYRS EEAWAAGGSG+L
Sbjct: 297  WRADGGLWLLVRGGGLYLSKGTGISEDFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVL 356

Query: 497  LRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 354
            LRTTNGGK+W RDKAADNIAANLYSVKFIDD KGFVLGNDGVLLR+LG
Sbjct: 357  LRTTNGGKTWTRDKAADNIAANLYSVKFIDDTKGFVLGNDGVLLRFLG 404